RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 IL6STP40189 918 aaPredicted RBP13.86□□□□□ -0.19
CHMP6-203ENST00000572525 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
CHMP6-203ENST00000572525 CCDC93Q567U6 631 aa13.86□□□□□ -0.19
CHMP6-203ENST00000572525 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
CHMP6-203ENST00000572525 EPHX2P34913 555 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 IL13P35225 146 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 ECE1P42892 770 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 ST5P78524 1137 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHMP6-203ENST00000572525 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
CHMP6-203ENST00000572525 RGL2O15211 777 aa13.84□□□□□ -0.19
CHMP6-203ENST00000572525 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
CHMP6-203ENST00000572525 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
CHMP6-203ENST00000572525 SETDB2Q96T68 719 aa13.84□□□□□ -0.19
CHMP6-203ENST00000572525 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.19
CHMP6-203ENST00000572525 KLRG2A4D1S0 409 aaPredicted RBP13.83□□□□□ -0.2
CHMP6-203ENST00000572525 FZD9O00144 591 aa13.83□□□□□ -0.2
CHMP6-203ENST00000572525 CA12O43570 354 aa13.83□□□□□ -0.2
CHMP6-203ENST00000572525 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
CHMP6-203ENST00000572525 GPC2Q8N158 579 aa13.83□□□□□ -0.2
CHMP6-203ENST00000572525 BEGAINQ9BUH8 593 aa13.83□□□□□ -0.2
CHMP6-203ENST00000572525 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
CHMP6-203ENST00000572525 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
CHMP6-203ENST00000572525 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
CHMP6-203ENST00000572525 CLEC4GQ6UXB4 293 aa13.82□□□□□ -0.2
CHMP6-203ENST00000572525 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
CHMP6-203ENST00000572525 TTC5Q8N0Z6 440 aa13.82□□□□□ -0.2
CHMP6-203ENST00000572525 DDX21Q9NR30 783 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHMP6-203ENST00000572525 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
CHMP6-203ENST00000572525 CCDC85CA6NKD9 419 aa13.81□□□□□ -0.2
CHMP6-203ENST00000572525 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
CHMP6-203ENST00000572525 NPR1P16066 1061 aa13.81□□□□□ -0.2
CHMP6-203ENST00000572525 MAP2K2P36507 400 aa13.81□□□□□ -0.2
CHMP6-203ENST00000572525 CAPNS2Q96L46 248 aa13.81□□□□□ -0.2
CHMP6-203ENST00000572525 ABT1Q9ULW3 272 aaKnown RBP13.81□□□□□ -0.2
CHMP6-203ENST00000572525 RNF123Q5XPI4 1314 aa13.8□□□□□ -0.2
CHMP6-203ENST00000572525 NPHP1O15259 732 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
CHMP6-203ENST00000572525 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 NPM2Q86SE8 214 aaKnown RBP13.79□□□□□ -0.2
CHMP6-203ENST00000572525 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 HHIPL1Q96JK4 782 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 PSMD1Q99460 953 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 TBC1D2BQ9UPU7 963 aa13.79□□□□□ -0.2
CHMP6-203ENST00000572525 NUP98P52948 1817 aa13.78□□□□□ -0.2
CHMP6-203ENST00000572525 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
CHMP6-203ENST00000572525 IARSP41252 1262 aaKnown RBP13.78□□□□□ -0.2
CHMP6-203ENST00000572525 ZNF496Q96IT1 587 aaPredicted RBP13.78□□□□□ -0.2
CHMP6-203ENST00000572525 GPR101Q96P66 508 aaPredicted RBP13.78□□□□□ -0.2
CHMP6-203ENST00000572525 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
CHMP6-203ENST00000572525 ALDH1B1P30837 517 aa13.77□□□□□ -0.21
CHMP6-203ENST00000572525 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
CHMP6-203ENST00000572525 GRIPAP1Q4V328 841 aa13.77□□□□□ -0.21
CHMP6-203ENST00000572525 CC2D2BQ6DHV5 1058 aa13.77□□□□□ -0.21
CHMP6-203ENST00000572525 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.21
CHMP6-203ENST00000572525 PANK3Q9H999 370 aa13.77□□□□□ -0.21
CHMP6-203ENST00000572525 TLL2Q9Y6L7 1015 aa13.77□□□□□ -0.21
CHMP6-203ENST00000572525 LAMB4A4D0S4 1761 aa13.76□□□□□ -0.21
CHMP6-203ENST00000572525 RIC1Q4ADV7 1423 aa13.76□□□□□ -0.21
CHMP6-203ENST00000572525 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
CHMP6-203ENST00000572525 JDP2Q8WYK2 163 aa13.76□□□□□ -0.21
CHMP6-203ENST00000572525 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
CHMP6-203ENST00000572525 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
CHMP6-203ENST00000572525 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
CHMP6-203ENST00000572525 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
CHMP6-203ENST00000572525 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
CHMP6-203ENST00000572525 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
CHMP6-203ENST00000572525 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
CHMP6-203ENST00000572525 COL4A5P29400 1685 aa13.75□□□□□ -0.21
CHMP6-203ENST00000572525 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
CHMP6-203ENST00000572525 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
CHMP6-203ENST00000572525 TEFQ10587 303 aa13.74□□□□□ -0.21
CHMP6-203ENST00000572525 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
CHMP6-203ENST00000572525 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
CHMP6-203ENST00000572525 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
CHMP6-203ENST00000572525 SCNN1DP51172 638 aa13.73□□□□□ -0.21
CHMP6-203ENST00000572525 CST9Q5W186 159 aa13.73□□□□□ -0.21
CHMP6-203ENST00000572525 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
CHMP6-203ENST00000572525 A1BGP04217 495 aa13.72□□□□□ -0.21
CHMP6-203ENST00000572525 CRY2Q49AN0 593 aa13.72□□□□□ -0.21
CHMP6-203ENST00000572525 SAPCD2Q86UD0 394 aa13.72□□□□□ -0.21
CHMP6-203ENST00000572525 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
CHMP6-203ENST00000572525 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
CHMP6-203ENST00000572525 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
CHMP6-203ENST00000572525 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.21
CHMP6-203ENST00000572525 HMOX1P09601 288 aa13.71□□□□□ -0.21
CHMP6-203ENST00000572525 PAXIP1Q6ZW49 1069 aaPredicted RBP13.71□□□□□ -0.21
CHMP6-203ENST00000572525 IL17REQ8NFR9 667 aa13.71□□□□□ -0.21
CHMP6-203ENST00000572525 VPS33BQ9H267 617 aa13.71□□□□□ -0.21
CHMP6-203ENST00000572525 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.21
CHMP6-203ENST00000572525 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.22
CHMP6-203ENST00000572525 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
CHMP6-203ENST00000572525 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
CHMP6-203ENST00000572525 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
CHMP6-203ENST00000572525 DIAPH1O60610 1272 aaKnown RBP13.69□□□□□ -0.22
CHMP6-203ENST00000572525 EPS15P42566 896 aa13.69□□□□□ -0.22
CHMP6-203ENST00000572525 DGKZQ13574 1117 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms