RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 C1QTNF12Q5T7M4 302 aa10.96□□□□□ -0.66
TVP23A-205ENST00000572428 MSL3Q8N5Y2 521 aaKnown RBP10.96□□□□□ -0.66
TVP23A-205ENST00000572428 GAS2L2Q8NHY3 880 aa10.96□□□□□ -0.66
TVP23A-205ENST00000572428 IL16Q14005 1332 aa10.95□□□□□ -0.66
TVP23A-205ENST00000572428 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
TVP23A-205ENST00000572428 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
TVP23A-205ENST00000572428 HMOX1P09601 288 aa10.95□□□□□ -0.66
TVP23A-205ENST00000572428 ZSCAN20P17040 1043 aaPredicted RBP10.95□□□□□ -0.66
TVP23A-205ENST00000572428 WDR17Q8IZU2 1322 aa10.95□□□□□ -0.66
TVP23A-205ENST00000572428 MAPK8IP3Q9UPT6 1336 aa10.95□□□□□ -0.66
TVP23A-205ENST00000572428 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
TVP23A-205ENST00000572428 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 TDO2P48775 406 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
TVP23A-205ENST00000572428 ZKSCAN8Q15776 578 aaPredicted RBP10.94□□□□□ -0.66
TVP23A-205ENST00000572428 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 ZKSCAN2Q63HK3 967 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 CCDC97Q96F63 343 aaPredicted RBP10.94□□□□□ -0.66
TVP23A-205ENST00000572428 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
TVP23A-205ENST00000572428 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 CAPN2P17655 700 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
TVP23A-205ENST00000572428 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
TVP23A-205ENST00000572428 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
TVP23A-205ENST00000572428 IGSF5Q9NSI5 407 aa10.93□□□□□ -0.66
TVP23A-205ENST00000572428 CRB1P82279 1406 aa10.93□□□□□ -0.66
TVP23A-205ENST00000572428 LRP6O75581 1613 aa10.93□□□□□ -0.66
TVP23A-205ENST00000572428 SSR1P43307 286 aaKnown RBP10.93□□□□□ -0.66
TVP23A-205ENST00000572428 GIMAP6Q6P9H5 292 aa10.93□□□□□ -0.66
TVP23A-205ENST00000572428 MRVI1Q9Y6F6 885 aa10.93□□□□□ -0.66
TVP23A-205ENST00000572428 PRDM11Q9NQV5 511 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 DISP2A7MBM2 1401 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 MEGF6O75095 1541 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 ANKRD62A6NC57 917 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 NRDCO43847 1150 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.92□□□□□ -0.66
TVP23A-205ENST00000572428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.66
TVP23A-205ENST00000572428 LONRF3Q496Y0 759 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 ZFYVE27Q5T4F4 411 aa10.92□□□□□ -0.66
TVP23A-205ENST00000572428 MRC1P22897 1456 aa10.91□□□□□ -0.66
TVP23A-205ENST00000572428 RIPK4P57078 832 aa10.91□□□□□ -0.66
TVP23A-205ENST00000572428 CHRNA2Q15822 529 aa10.91□□□□□ -0.66
TVP23A-205ENST00000572428 ZC3H12AQ5D1E8 599 aaKnown RBP10.91□□□□□ -0.66
TVP23A-205ENST00000572428 KLHL42Q9P2K6 505 aa10.91□□□□□ -0.66
TVP23A-205ENST00000572428 PAPPAQ13219 1627 aa10.91□□□□□ -0.66
TVP23A-205ENST00000572428 MTHFSDQ2M296 383 aaKnown RBP10.9□□□□□ -0.66
TVP23A-205ENST00000572428 AMOTQ4VCS5 1084 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 MKL1Q969V6 931 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 CEMIPQ8WUJ3 1361 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 CEP83Q9Y592 693 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 NUB1Q9Y5A7 615 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 CACNA1FO60840 1977 aa10.9□□□□□ -0.66
TVP23A-205ENST00000572428 POM121Q96HA1 1249 aa10.9□□□□□ -0.67
TVP23A-205ENST00000572428 TRAK2O60296 914 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 EXOC6Q8TAG9 804 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 LTV1Q96GA3 475 aaPredicted RBP10.89□□□□□ -0.67
TVP23A-205ENST00000572428 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 BSDC1Q9NW68 430 aaPredicted RBP10.89□□□□□ -0.67
TVP23A-205ENST00000572428 TOGARAM1Q9Y4F4 1720 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 MAP3K5Q99683 1374 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 THSD7AQ9UPZ6 1657 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 KIAA1522Q9P206 1035 aaPredicted RBP10.89□□□□□ -0.67
TVP23A-205ENST00000572428 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
TVP23A-205ENST00000572428 SETDB1Q15047 1291 aa10.89□□□□□ -0.67
TVP23A-205ENST00000572428 UBR2Q8IWV8 1755 aa10.88□□□□□ -0.67
TVP23A-205ENST00000572428 BCL9LQ86UU0 1499 aa10.88□□□□□ -0.67
TVP23A-205ENST00000572428 ITGB4P16144 1822 aa10.88□□□□□ -0.67
TVP23A-205ENST00000572428 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
TVP23A-205ENST00000572428 USHBP1Q8N6Y0 703 aa10.88□□□□□ -0.67
TVP23A-205ENST00000572428 CAPN15O75808 1086 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 TPM2P07951 284 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 HSPA1LP34931 641 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 CLCN1P35523 988 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 ITFG2Q969R8 447 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 SEMA3EO15041 775 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 PLEKHO1Q53GL0 409 aaPredicted RBP10.87□□□□□ -0.67
TVP23A-205ENST00000572428 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
TVP23A-205ENST00000572428 CCDC94Q9BW85 323 aaPredicted RBP10.87□□□□□ -0.67
TVP23A-205ENST00000572428 IFT57Q9NWB7 429 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 BABAM1Q9NWV8 329 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 AKAP4Q5JQC9 854 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 BTG4Q9NY30 223 aa10.87□□□□□ -0.67
TVP23A-205ENST00000572428 GNAT3A8MTJ3 354 aa10.86□□□□□ -0.67
TVP23A-205ENST00000572428 THRAP3Q9Y2W1 955 aaKnown RBP10.86□□□□□ -0.67
TVP23A-205ENST00000572428 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
TVP23A-205ENST00000572428 NAT1P18440 290 aa10.86□□□□□ -0.67
TVP23A-205ENST00000572428 ERCC3P19447 782 aa10.86□□□□□ -0.67
TVP23A-205ENST00000572428 NEXNQ0ZGT2 675 aa10.86□□□□□ -0.67
TVP23A-205ENST00000572428 LARP1Q6PKG0 1096 aaKnown RBP10.86□□□□□ -0.67
TVP23A-205ENST00000572428 FRAT1Q92837 279 aaPredicted RBP10.86□□□□□ -0.67
TVP23A-205ENST00000572428 CGNQ9P2M7 1197 aaKnown RBP10.86□□□□□ -0.67
TVP23A-205ENST00000572428 NLRP2Q9NX02 1062 aa10.85□□□□□ -0.67
TVP23A-205ENST00000572428 LETM1O95202 739 aaPredicted RBP10.85□□□□□ -0.67
TVP23A-205ENST00000572428 FRMD4BQ9Y2L6 1034 aa10.85□□□□□ -0.67
TVP23A-205ENST00000572428 SMC3Q9UQE7 1217 aa10.85□□□□□ -0.67
TVP23A-205ENST00000572428 TATP17735 454 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms