RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-213ENST00000571886 ANKRD31Q8N7Z5 1873 aa13.37□□□□□ -0.27
GTF3C1-213ENST00000571886 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
GTF3C1-213ENST00000571886 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
GTF3C1-213ENST00000571886 BCS1LQ9Y276 419 aa13.36□□□□□ -0.27
GTF3C1-213ENST00000571886 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
GTF3C1-213ENST00000571886 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
GTF3C1-213ENST00000571886 CLEC4GQ6UXB4 293 aa13.35□□□□□ -0.27
GTF3C1-213ENST00000571886 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
GTF3C1-213ENST00000571886 IFT57Q9NWB7 429 aa13.35□□□□□ -0.27
GTF3C1-213ENST00000571886 MAP3K15Q6ZN16 1313 aa13.35□□□□□ -0.27
GTF3C1-213ENST00000571886 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
GTF3C1-213ENST00000571886 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-213ENST00000571886 C8orf58Q8NAV2 365 aa13.34□□□□□ -0.27
GTF3C1-213ENST00000571886 ZBTB3Q9H5J0 574 aa13.34□□□□□ -0.27
GTF3C1-213ENST00000571886 NIP7Q9Y221 180 aaKnown RBP eCLIP13.34□□□□□ -0.27
GTF3C1-213ENST00000571886 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
GTF3C1-213ENST00000571886 ERVV-1B6SEH8 477 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 GNAI1P63096 354 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 COPS6Q7L5N1 327 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 TSPYL6Q8N831 410 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
GTF3C1-213ENST00000571886 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-213ENST00000571886 C2CD5Q86YS7 1000 aa13.32□□□□□ -0.28
GTF3C1-213ENST00000571886 XAGE3Q8WTP9 111 aa13.32□□□□□ -0.28
GTF3C1-213ENST00000571886 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
GTF3C1-213ENST00000571886 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
GTF3C1-213ENST00000571886 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 GPTP24298 496 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 KIF6Q6ZMV9 814 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 ARFGEF1Q9Y6D6 1849 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 UBN2Q6ZU65 1347 aa13.31□□□□□ -0.28
GTF3C1-213ENST00000571886 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 RGL2O15211 777 aa13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 HOXB7P09629 217 aa13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 SUSD4Q5VX71 490 aa13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-213ENST00000571886 H0YIN7 160 aa13.29□□□□□ -0.28
GTF3C1-213ENST00000571886 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-213ENST00000571886 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
GTF3C1-213ENST00000571886 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.281e-7■□□□□ 9.9
GTF3C1-213ENST00000571886 CACNA1SQ13698 1873 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 NPHP1O15259 732 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 ST5P78524 1137 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 ERFEQ4G0M1 354 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 ATP10DQ9P241 1426 aa13.28□□□□□ -0.28
GTF3C1-213ENST00000571886 SLX4Q8IY92 1834 aa13.27□□□□□ -0.28
GTF3C1-213ENST00000571886 SRGNP10124 158 aa13.27□□□□□ -0.29
GTF3C1-213ENST00000571886 PDE6BP35913 854 aa13.27□□□□□ -0.29
GTF3C1-213ENST00000571886 TTLL6Q8N841 843 aa13.27□□□□□ -0.29
GTF3C1-213ENST00000571886 DBF4Q9UBU7 674 aaPredicted RBP13.27□□□□□ -0.29
GTF3C1-213ENST00000571886 IL16Q14005 1332 aa13.27□□□□□ -0.29
GTF3C1-213ENST00000571886 ABCC12Q96J65 1359 aa13.27□□□□□ -0.29
GTF3C1-213ENST00000571886 SBF1O95248 1867 aa13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 NTSR2O95665 410 aa13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 PRELPP51888 382 aa13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 WDR63Q8IWG1 891 aa13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 TNRC6CQ9HCJ0 1690 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-213ENST00000571886 ANKRD36CQ5JPF3 1778 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 HYPKQ9NX55 129 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
GTF3C1-213ENST00000571886 C21orf2O43822 256 aa13.24□□□□□ -0.29
GTF3C1-213ENST00000571886 GTF2E1P29083 439 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-213ENST00000571886 RASSF7Q02833 373 aa13.24□□□□□ -0.29
GTF3C1-213ENST00000571886 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-213ENST00000571886 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
GTF3C1-213ENST00000571886 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
GTF3C1-213ENST00000571886 ADCY9O60503 1353 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 CCER2I3L3R5 266 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 CCDC30Q5VVM6 783 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 STYK1Q6J9G0 422 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 G2E3Q7L622 706 aa13.23□□□□□ -0.29
GTF3C1-213ENST00000571886 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms