RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
CDRT1-206ENST00000571263 RPS6KA4O75676 772 aa15.04■□□□□ -0
CDRT1-206ENST00000571263 ZBTB1Q9Y2K1 713 aa15.04■□□□□ -0
CDRT1-206ENST00000571263 ADCY9O60503 1353 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 F6X3S4 739 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 ZBTB7BO15156 539 aaPredicted RBP15.03■□□□□ -0
CDRT1-206ENST00000571263 GNAI3P08754 354 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 ADRA2BP18089 450 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 TXNRD1Q16881 649 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 BEND3Q5T5X7 828 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 LINC00116Q8NCU8 138 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 TNNQ9UQP3 1299 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
CDRT1-206ENST00000571263 RREB1Q92766 1687 aa15.03■□□□□ -0
CDRT1-206ENST00000571263 MAP3K15Q6ZN16 1313 aa15.02■□□□□ -0
CDRT1-206ENST00000571263 ZBTB40Q9NUA8 1239 aa15.02■□□□□ -0
CDRT1-206ENST00000571263 RTCBQ9Y3I0 505 aaKnown RBP15.02■□□□□ -0
CDRT1-206ENST00000571263 RGPD3A6NKT7 1758 aaPredicted RBP15.01□□□□□ -0.01
CDRT1-206ENST00000571263 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
CDRT1-206ENST00000571263 BAG6P46379 1132 aa15.01□□□□□ -0.01
CDRT1-206ENST00000571263 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
CDRT1-206ENST00000571263 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
CDRT1-206ENST00000571263 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
CDRT1-206ENST00000571263 AK7Q96M32 723 aa15.01□□□□□ -0.01
CDRT1-206ENST00000571263 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
CDRT1-206ENST00000571263 ZNF330Q9Y3S2 320 aaPredicted RBP15.01□□□□□ -0.01
CDRT1-206ENST00000571263 TCIRG1Q13488 830 aa15□□□□□ -0.01
CDRT1-206ENST00000571263 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
CDRT1-206ENST00000571263 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
CDRT1-206ENST00000571263 TTLL7Q6ZT98 887 aa15□□□□□ -0.01
CDRT1-206ENST00000571263 ARXQ96QS3 562 aa15□□□□□ -0.01
CDRT1-206ENST00000571263 TRAPPC3LQ5T215 181 aa14.99□□□□□ -0.01
CDRT1-206ENST00000571263 CCDC191Q8NCU4 936 aa14.99□□□□□ -0.01
CDRT1-206ENST00000571263 FLAD1Q8NFF5 587 aa14.99□□□□□ -0.01
CDRT1-206ENST00000571263 CCDC136Q96JN2 1154 aa14.99□□□□□ -0.01
CDRT1-206ENST00000571263 MYD88Q99836 296 aa14.99□□□□□ -0.01
CDRT1-206ENST00000571263 COL15A1P39059 1388 aa14.98□□□□□ -0.01
CDRT1-206ENST00000571263 N4BP2Q86UW6 1770 aaPredicted RBP14.98□□□□□ -0.01
CDRT1-206ENST00000571263 GNPATO15228 680 aa14.98□□□□□ -0.01
CDRT1-206ENST00000571263 RPAP2Q8IXW5 612 aaPredicted RBP14.98□□□□□ -0.01
CDRT1-206ENST00000571263 PROM2Q8N271 834 aa14.98□□□□□ -0.01
CDRT1-206ENST00000571263 LRRC4BQ9NT99 713 aa14.98□□□□□ -0.01
CDRT1-206ENST00000571263 C9orf78Q9NZ63 289 aaPredicted RBP14.98□□□□□ -0.01
CDRT1-206ENST00000571263 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
CDRT1-206ENST00000571263 TAF1LQ8IZX4 1826 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 NEURL1BA8MQ27 555 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 GNAI2P04899 355 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 UBTFL1P0CB47 393 aaPredicted RBP14.97□□□□□ -0.01
CDRT1-206ENST00000571263 SSFA2P28290 1259 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 ISCA1Q9BUE6 129 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 RWDD1Q9H446 243 aaPredicted RBP14.97□□□□□ -0.01
CDRT1-206ENST00000571263 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 C4BP0C0L5 1744 aa14.97□□□□□ -0.01
CDRT1-206ENST00000571263 UTYO14607 1347 aa14.96□□□□□ -0.01
CDRT1-206ENST00000571263 ZPR1O75312 459 aa14.96□□□□□ -0.01
CDRT1-206ENST00000571263 HSP90B1P14625 803 aaKnown RBP14.96□□□□□ -0.01
CDRT1-206ENST00000571263 GCKRQ14397 625 aa14.96□□□□□ -0.01
CDRT1-206ENST00000571263 CAMKK2Q96RR4 588 aa14.96□□□□□ -0.01
CDRT1-206ENST00000571263 CWC25Q9NXE8 425 aaPredicted RBP14.96□□□□□ -0.01
CDRT1-206ENST00000571263 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
CDRT1-206ENST00000571263 GRM8O00222 908 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 CAMTA2O94983 1202 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 IGKV5-2P06315 115 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 RFC4P35249 363 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 KCNQ4P56696 695 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 ARFGEF2Q9Y6D5 1785 aa14.95□□□□□ -0.02
CDRT1-206ENST00000571263 CWF19L2Q2TBE0 894 aaKnown RBP14.94□□□□□ -0.02
CDRT1-206ENST00000571263 ZNF34Q8IZ26 560 aa14.94□□□□□ -0.02
CDRT1-206ENST00000571263 MEIS3Q99687 375 aa14.94□□□□□ -0.02
CDRT1-206ENST00000571263 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
CDRT1-206ENST00000571263 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
CDRT1-206ENST00000571263 HMMRO75330 724 aa14.93□□□□□ -0.02
CDRT1-206ENST00000571263 EN1Q05925 392 aaPredicted RBP14.93□□□□□ -0.02
CDRT1-206ENST00000571263 HDAC1Q13547 482 aaPredicted RBP14.93□□□□□ -0.02
CDRT1-206ENST00000571263 ARHGEF1Q92888 912 aaKnown RBP14.93□□□□□ -0.02
CDRT1-206ENST00000571263 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
CDRT1-206ENST00000571263 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
CDRT1-206ENST00000571263 H7C1W4 665 aa14.92□□□□□ -0.02
CDRT1-206ENST00000571263 SOCS7O14512 581 aa14.92□□□□□ -0.02
CDRT1-206ENST00000571263 HLFQ16534 295 aa14.92□□□□□ -0.02
CDRT1-206ENST00000571263 CENPQQ7L2Z9 268 aaPredicted RBP14.92□□□□□ -0.02
CDRT1-206ENST00000571263 PPP1R42Q7Z4L9 355 aa14.92□□□□□ -0.02
CDRT1-206ENST00000571263 TFCP2L1Q9NZI6 479 aa14.92□□□□□ -0.02
CDRT1-206ENST00000571263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
CDRT1-206ENST00000571263 PCCAP05165 728 aaPredicted RBP14.91□□□□□ -0.02
CDRT1-206ENST00000571263 NBPF7P0C2Y1 421 aaPredicted RBP14.91□□□□□ -0.02
CDRT1-206ENST00000571263 EZH2Q15910 746 aaKnown RBP14.91□□□□□ -0.02
CDRT1-206ENST00000571263 NLRP10Q86W26 655 aa14.91□□□□□ -0.02
CDRT1-206ENST00000571263 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
CDRT1-206ENST00000571263 ZBTB38Q8NAP3 1195 aaPredicted RBP14.91□□□□□ -0.02
CDRT1-206ENST00000571263 STK32BQ9NY57 414 aa14.91□□□□□ -0.02
CDRT1-206ENST00000571263 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
CDRT1-206ENST00000571263 USP42Q9H9J4 1324 aaKnown RBP14.91□□□□□ -0.02
CDRT1-206ENST00000571263 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
CDRT1-206ENST00000571263 B4GALNT3Q6L9W6 998 aa14.9□□□□□ -0.02
CDRT1-206ENST00000571263 ILDR2Q71H61 639 aa14.9□□□□□ -0.02
CDRT1-206ENST00000571263 CDHR2Q9BYE9 1310 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms