RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.05
RPAIN-208ENST00000571043 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.05
RPAIN-208ENST00000571043 RGPD3A6NKT7 1758 aaPredicted RBP21.57■■□□□ 1.04
RPAIN-208ENST00000571043 RGPD4Q7Z3J3 1758 aa21.57■■□□□ 1.04
RPAIN-208ENST00000571043 KCNQ4P56696 695 aa21.57■■□□□ 1.04
RPAIN-208ENST00000571043 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
RPAIN-208ENST00000571043 PDIA6Q15084 440 aa21.57■■□□□ 1.04
RPAIN-208ENST00000571043 TXNRD1Q16881 649 aa21.57■■□□□ 1.04
RPAIN-208ENST00000571043 LRRC4BQ9NT99 713 aa21.57■■□□□ 1.04
RPAIN-208ENST00000571043 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
RPAIN-208ENST00000571043 COL5A3P25940 1745 aaPredicted RBP21.57■■□□□ 1.04
RPAIN-208ENST00000571043 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
RPAIN-208ENST00000571043 A1BGP04217 495 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
RPAIN-208ENST00000571043 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 CAMKK2Q96RR4 588 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 SRCIN1Q9C0H9 1055 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 DDX21Q9NR30 783 aaKnown RBP eCLIP21.55■■□□□ 1.04
RPAIN-208ENST00000571043 HYPKQ9NX55 129 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
RPAIN-208ENST00000571043 ILDR2Q71H61 639 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 LINC00116Q8NCU8 138 aa21.55■■□□□ 1.04
RPAIN-208ENST00000571043 NBPF26B4DH59 902 aa21.54■■□□□ 1.04
RPAIN-208ENST00000571043 NBPF14Q5TI25 921 aa21.54■■□□□ 1.04
RPAIN-208ENST00000571043 NBPF10Q6P3W6 841 aaKnown RBP21.54■■□□□ 1.04
RPAIN-208ENST00000571043 INTS5Q6P9B9 1019 aaKnown RBP21.54■■□□□ 1.04
RPAIN-208ENST00000571043 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
RPAIN-208ENST00000571043 NBPF15Q8N660 670 aa21.54■■□□□ 1.04
RPAIN-208ENST00000571043 CRKLP46109 303 aaKnown RBP21.53■■□□□ 1.04
RPAIN-208ENST00000571043 BAG6P46379 1132 aa21.53■■□□□ 1.04
RPAIN-208ENST00000571043 EN1Q05925 392 aaPredicted RBP21.53■■□□□ 1.04
RPAIN-208ENST00000571043 BMP2KLQ5H9B9 411 aa21.53■■□□□ 1.04
RPAIN-208ENST00000571043 BEND3Q5T5X7 828 aa21.53■■□□□ 1.04
RPAIN-208ENST00000571043 RC3H1Q5TC82 1133 aaKnown RBP21.53■■□□□ 1.04
RPAIN-208ENST00000571043 USP44Q9H0E7 712 aa21.53■■□□□ 1.04
RPAIN-208ENST00000571043 PI4KAP2A4QPH2 592 aa21.52■■□□□ 1.04
RPAIN-208ENST00000571043 ATP8B2P98198 1209 aa21.52■■□□□ 1.04
RPAIN-208ENST00000571043 PROSER3Q2NL68 480 aa21.52■■□□□ 1.04
RPAIN-208ENST00000571043 LRP10Q7Z4F1 713 aa21.52■■□□□ 1.04
RPAIN-208ENST00000571043 PI4KAP1Q8N8J0 262 aa21.52■■□□□ 1.04
RPAIN-208ENST00000571043 UPF2Q9HAU5 1272 aaKnown RBP21.52■■□□□ 1.04
RPAIN-208ENST00000571043 CCDC87Q9NVE4 849 aa21.52■■□□□ 1.04
RPAIN-208ENST00000571043 CNTNAP4Q9C0A0 1308 aa21.51■■□□□ 1.03
RPAIN-208ENST00000571043 ANXA1P04083 346 aa21.51■■□□□ 1.03
RPAIN-208ENST00000571043 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
RPAIN-208ENST00000571043 UPF1Q92900 1129 aaKnown RBP eCLIP21.51■■□□□ 1.03
RPAIN-208ENST00000571043 ADCY9O60503 1353 aa21.51■■□□□ 1.03
RPAIN-208ENST00000571043 SEC24BO95487 1268 aa21.5■■□□□ 1.03
RPAIN-208ENST00000571043 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
RPAIN-208ENST00000571043 EZH2Q15910 746 aaKnown RBP21.5■■□□□ 1.03
RPAIN-208ENST00000571043 KSR2Q6VAB6 950 aa21.5■■□□□ 1.03
RPAIN-208ENST00000571043 DEFB132Q7Z7B7 95 aa21.5■■□□□ 1.03
RPAIN-208ENST00000571043 ZBTB1Q9Y2K1 713 aa21.5■■□□□ 1.03
RPAIN-208ENST00000571043 RREB1Q92766 1687 aa21.5■■□□□ 1.03
RPAIN-208ENST00000571043 MYL6BP14649 208 aa21.5■■□□□ 1.03
RPAIN-208ENST00000571043 N4BP2Q86UW6 1770 aaPredicted RBP21.49■■□□□ 1.03
RPAIN-208ENST00000571043 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
RPAIN-208ENST00000571043 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
RPAIN-208ENST00000571043 IL6STP40189 918 aaPredicted RBP21.49■■□□□ 1.03
RPAIN-208ENST00000571043 C4BP0C0L5 1744 aa21.48■■□□□ 1.03
RPAIN-208ENST00000571043 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
RPAIN-208ENST00000571043 LRRFIP2Q9Y608 721 aaKnown RBP21.47■■□□□ 1.03
RPAIN-208ENST00000571043 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
RPAIN-208ENST00000571043 PLEKHM2Q8IWE5 1019 aa21.46■■□□□ 1.03
RPAIN-208ENST00000571043 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
RPAIN-208ENST00000571043 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
RPAIN-208ENST00000571043 HDAC5Q9UQL6 1122 aa21.45■■□□□ 1.02
RPAIN-208ENST00000571043 MAP3K2Q9Y2U5 619 aa21.45■■□□□ 1.02
RPAIN-208ENST00000571043 XAGE3Q8WTP9 111 aa21.45■■□□□ 1.02
RPAIN-208ENST00000571043 TBC1D32Q96NH3 1257 aa21.45■■□□□ 1.02
RPAIN-208ENST00000571043 ANP32EQ9BTT0 268 aa21.45■■□□□ 1.02
RPAIN-208ENST00000571043 PNMA6EA0A0J9YXQ4 647 aa21.43■■□□□ 1.02
RPAIN-208ENST00000571043 AIMP1Q12904 312 aaKnown RBP21.43■■□□□ 1.02
RPAIN-208ENST00000571043 LINS1Q8NG48 757 aa21.43■■□□□ 1.02
RPAIN-208ENST00000571043 SSH3Q8TE77 659 aa21.43■■□□□ 1.02
RPAIN-208ENST00000571043 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
RPAIN-208ENST00000571043 AK7Q96M32 723 aa21.43■■□□□ 1.02
RPAIN-208ENST00000571043 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
RPAIN-208ENST00000571043 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
RPAIN-208ENST00000571043 GNPATO15228 680 aa21.42■■□□□ 1.02
RPAIN-208ENST00000571043 POLA2Q14181 598 aa21.42■■□□□ 1.02
RPAIN-208ENST00000571043 ANKRD13DQ6ZTN6 518 aa21.42■■□□□ 1.02
RPAIN-208ENST00000571043 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
RPAIN-208ENST00000571043 ZNF330Q9Y3S2 320 aaPredicted RBP21.41■■□□□ 1.02
RPAIN-208ENST00000571043 EIF5BO60841 1220 aaKnown RBP21.4■■□□□ 1.02
RPAIN-208ENST00000571043 NBPF7P0C2Y1 421 aaPredicted RBP21.4■■□□□ 1.02
RPAIN-208ENST00000571043 TTC22Q5TAA0 569 aa21.4■■□□□ 1.02
RPAIN-208ENST00000571043 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
RPAIN-208ENST00000571043 C16orf71Q8IYS4 520 aaPredicted RBP21.39■■□□□ 1.02
RPAIN-208ENST00000571043 LRRCC1Q9C099 1032 aa21.39■■□□□ 1.02
RPAIN-208ENST00000571043 OSBPL3Q9H4L5 887 aa21.39■■□□□ 1.02
RPAIN-208ENST00000571043 UTYO14607 1347 aa21.39■■□□□ 1.02
RPAIN-208ENST00000571043 COL15A1P39059 1388 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 NUP188Q5SRE5 1749 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 A0A087WZG4 1122 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 SMARCA5O60264 1052 aaPredicted RBP21.39■■□□□ 1.01
RPAIN-208ENST00000571043 RAB11FIP3O75154 756 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 MTX1Q13505 466 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 ZNF827Q17R98 1081 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 RIC3Q7Z5B4 369 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms