RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
SPNS2-203ENST00000570979 DCAF5Q96JK2 942 aa24.29■■□□□ 1.48
SPNS2-203ENST00000570979 C4BP0C0L5 1744 aa24.28■■□□□ 1.48
SPNS2-203ENST00000570979 SYT17Q9BSW7 474 aa24.28■■□□□ 1.48
SPNS2-203ENST00000570979 ERVV-2B6SEH9 535 aa24.27■■□□□ 1.48
SPNS2-203ENST00000570979 SIRT2Q8IXJ6 389 aa24.27■■□□□ 1.48
SPNS2-203ENST00000570979 LINC00116Q8NCU8 138 aa24.27■■□□□ 1.48
SPNS2-203ENST00000570979 C1orf115Q9H7X2 142 aa24.27■■□□□ 1.48
SPNS2-203ENST00000570979 PXDNLA1KZ92 1463 aa24.27■■□□□ 1.48
SPNS2-203ENST00000570979 HSP90AB1P08238 724 aaKnown RBP24.26■■□□□ 1.47
SPNS2-203ENST00000570979 ITPK1Q13572 414 aa24.26■■□□□ 1.47
SPNS2-203ENST00000570979 FLIIQ13045 1269 aa24.26■■□□□ 1.47
SPNS2-203ENST00000570979 SEC24BO95487 1268 aa24.24■■□□□ 1.47
SPNS2-203ENST00000570979 GNAI2P04899 355 aa24.24■■□□□ 1.47
SPNS2-203ENST00000570979 CEP85Q6P2H3 762 aa24.24■■□□□ 1.47
SPNS2-203ENST00000570979 SLC4A9Q96Q91 983 aa24.24■■□□□ 1.47
SPNS2-203ENST00000570979 FKBP5Q13451 457 aaPredicted RBP24.24■■□□□ 1.47
SPNS2-203ENST00000570979 UBR3Q6ZT12 1888 aa24.23■■□□□ 1.47
SPNS2-203ENST00000570979 HDGFL1Q5TGJ6 251 aa24.23■■□□□ 1.47
SPNS2-203ENST00000570979 MSL1Q68DK7 614 aa24.23■■□□□ 1.47
SPNS2-203ENST00000570979 UBE2Q2Q8WVN8 375 aa24.23■■□□□ 1.47
SPNS2-203ENST00000570979 C22orf23Q9BZE7 217 aa24.23■■□□□ 1.47
SPNS2-203ENST00000570979 ATP6V1AP38606 617 aa24.22■■□□□ 1.47
SPNS2-203ENST00000570979 CABP4P57796 275 aa24.22■■□□□ 1.47
SPNS2-203ENST00000570979 AK7Q96M32 723 aa24.22■■□□□ 1.47
SPNS2-203ENST00000570979 ATP10DQ9P241 1426 aa24.22■■□□□ 1.47
SPNS2-203ENST00000570979 SLC4A10Q6U841 1118 aa24.21■■□□□ 1.47
SPNS2-203ENST00000570979 POLD1P28340 1107 aa24.21■■□□□ 1.47
SPNS2-203ENST00000570979 HDAC5Q9UQL6 1122 aa24.21■■□□□ 1.47
SPNS2-203ENST00000570979 PHF14O94880 888 aa24.2■■□□□ 1.46
SPNS2-203ENST00000570979 EIF4A1P60842 406 aaKnown RBP24.2■■□□□ 1.46
SPNS2-203ENST00000570979 SCN11AQ9UI33 1791 aa24.2■■□□□ 1.46
SPNS2-203ENST00000570979 BTBD11A6QL63 1104 aa24.19■■□□□ 1.46
SPNS2-203ENST00000570979 RNMTO43148 476 aaKnown RBP24.19■■□□□ 1.46
SPNS2-203ENST00000570979 G2E3Q7L622 706 aa24.19■■□□□ 1.46
SPNS2-203ENST00000570979 NFATC2IPQ8NCF5 419 aa24.19■■□□□ 1.46
SPNS2-203ENST00000570979 MEIS3Q99687 375 aa24.19■■□□□ 1.46
SPNS2-203ENST00000570979 RBM42Q9BTD8 480 aaKnown RBP24.19■■□□□ 1.46
SPNS2-203ENST00000570979 LGR6Q9HBX8 967 aa24.19■■□□□ 1.46
SPNS2-203ENST00000570979 KDM3BQ7LBC6 1761 aa24.18■■□□□ 1.46
SPNS2-203ENST00000570979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.18■■□□□ 1.46
SPNS2-203ENST00000570979 HMGB2P26583 209 aaKnown RBP24.18■■□□□ 1.46
SPNS2-203ENST00000570979 FLAD1Q8NFF5 587 aa24.18■■□□□ 1.46
SPNS2-203ENST00000570979 N4BP2Q86UW6 1770 aaPredicted RBP24.17■■□□□ 1.46
SPNS2-203ENST00000570979 NBR1Q14596 966 aa24.17■■□□□ 1.46
SPNS2-203ENST00000570979 KLHL34Q8N239 644 aa24.17■■□□□ 1.46
SPNS2-203ENST00000570979 GNPATO15228 680 aa24.16■■□□□ 1.46
SPNS2-203ENST00000570979 CDC45O75419 566 aa24.16■■□□□ 1.46
SPNS2-203ENST00000570979 MFAP1P55081 439 aaKnown RBP24.16■■□□□ 1.46
SPNS2-203ENST00000570979 CASC1Q6TDU7 716 aa24.16■■□□□ 1.46
SPNS2-203ENST00000570979 RBM25P49756 843 aaKnown RBP24.15■■□□□ 1.46
SPNS2-203ENST00000570979 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.46
SPNS2-203ENST00000570979 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
SPNS2-203ENST00000570979 DCAF8L1A6NGE4 600 aa24.14■■□□□ 1.45
SPNS2-203ENST00000570979 F6X3S4 739 aa24.14■■□□□ 1.45
SPNS2-203ENST00000570979 SSFA2P28290 1259 aa24.14■■□□□ 1.45
SPNS2-203ENST00000570979 PLEKHM2Q8IWE5 1019 aa24.14■■□□□ 1.45
SPNS2-203ENST00000570979 DBF4Q9UBU7 674 aaPredicted RBP24.14■■□□□ 1.45
SPNS2-203ENST00000570979 ATP8B2P98198 1209 aa24.13■■□□□ 1.45
SPNS2-203ENST00000570979 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
SPNS2-203ENST00000570979 COL5A3P25940 1745 aaPredicted RBP24.13■■□□□ 1.45
SPNS2-203ENST00000570979 SLC52A2Q9HAB3 445 aa24.12■■□□□ 1.45
SPNS2-203ENST00000570979 SRCIN1Q9C0H9 1055 aa24.11■■□□□ 1.45
SPNS2-203ENST00000570979 MYH14Q7Z406 1995 aaKnown RBP24.11■■□□□ 1.45
SPNS2-203ENST00000570979 TTC22Q5TAA0 569 aa24.11■■□□□ 1.45
SPNS2-203ENST00000570979 UTRNP46939 3433 aa24.1■■□□□ 1.45
SPNS2-203ENST00000570979 ADAMTS7Q9UKP4 1686 aa24.1■■□□□ 1.45
SPNS2-203ENST00000570979 UBTFL1P0CB47 393 aaPredicted RBP24.1■■□□□ 1.45
SPNS2-203ENST00000570979 MRC1P22897 1456 aa24.1■■□□□ 1.45
SPNS2-203ENST00000570979 YY1P25490 414 aa24.09■■□□□ 1.45
SPNS2-203ENST00000570979 OSBPL3Q9H4L5 887 aa24.09■■□□□ 1.45
SPNS2-203ENST00000570979 SLC4A3P48751 1232 aa24.08■■□□□ 1.45
SPNS2-203ENST00000570979 SLC39A6Q13433 755 aa24.08■■□□□ 1.45
SPNS2-203ENST00000570979 HEG1Q9ULI3 1381 aa24.08■■□□□ 1.45
SPNS2-203ENST00000570979 EIF2S2P20042 333 aaKnown RBP24.08■■□□□ 1.44
SPNS2-203ENST00000570979 RC3H1Q5TC82 1133 aaKnown RBP24.08■■□□□ 1.44
SPNS2-203ENST00000570979 HYPKQ9NX55 129 aa24.08■■□□□ 1.44
SPNS2-203ENST00000570979 TJP1Q07157 1748 aa24.08■■□□□ 1.44
SPNS2-203ENST00000570979 CNTNAP4Q9C0A0 1308 aa24.07■■□□□ 1.44
SPNS2-203ENST00000570979 DNAAF4Q8WXU2 420 aa24.07■■□□□ 1.44
SPNS2-203ENST00000570979 NECTIN2Q92692 538 aa24.06■■□□□ 1.44
SPNS2-203ENST00000570979 RTCBQ9Y3I0 505 aaKnown RBP24.06■■□□□ 1.44
SPNS2-203ENST00000570979 RAB11FIP3O75154 756 aa24.06■■□□□ 1.44
SPNS2-203ENST00000570979 DDX58O95786 925 aaKnown RBP24.06■■□□□ 1.44
SPNS2-203ENST00000570979 TBC1D9Q6ZT07 1266 aa24.06■■□□□ 1.44
SPNS2-203ENST00000570979 HSCBQ8IWL3 235 aa24.06■■□□□ 1.44
SPNS2-203ENST00000570979 SNX21Q969T3 373 aa24.06■■□□□ 1.44
SPNS2-203ENST00000570979 LRRCC1Q9C099 1032 aa24.06■■□□□ 1.44
SPNS2-203ENST00000570979 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
SPNS2-203ENST00000570979 ALDH1L1O75891 902 aa24.05■■□□□ 1.44
SPNS2-203ENST00000570979 HSP90AB4PQ58FF6 505 aa24.05■■□□□ 1.44
SPNS2-203ENST00000570979 RPS6KA4O75676 772 aa24.04■■□□□ 1.44
SPNS2-203ENST00000570979 CRKLP46109 303 aaKnown RBP24.04■■□□□ 1.44
SPNS2-203ENST00000570979 ARHGEF1Q92888 912 aaKnown RBP24.04■■□□□ 1.44
SPNS2-203ENST00000570979 TBC1D2Q9BYX2 928 aa24.04■■□□□ 1.44
SPNS2-203ENST00000570979 USP44Q9H0E7 712 aa24.04■■□□□ 1.44
SPNS2-203ENST00000570979 GOLGB1Q14789 3259 aaKnown RBP24.04■■□□□ 1.44
SPNS2-203ENST00000570979 TRAPPC3LQ5T215 181 aa24.03■■□□□ 1.44
SPNS2-203ENST00000570979 CHPF2Q9P2E5 772 aa24.03■■□□□ 1.44
SPNS2-203ENST00000570979 GPR162Q16538 588 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms