RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 LGR5O75473 907 aa7.94□□□□□ -1.14
NUP88-202ENST00000570937 ALDH16A1Q8IZ83 802 aa7.94□□□□□ -1.14
NUP88-202ENST00000570937 RHPN1Q8TCX5 695 aa7.94□□□□□ -1.14
NUP88-202ENST00000570937 CHMP7Q8WUX9 453 aaPredicted RBP7.94□□□□□ -1.14
NUP88-202ENST00000570937 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
NUP88-202ENST00000570937 ATXN7O15265 892 aaPredicted RBP7.93□□□□□ -1.14
NUP88-202ENST00000570937 FAM157BP0CG42 384 aa7.93□□□□□ -1.14
NUP88-202ENST00000570937 MX2P20592 715 aa7.93□□□□□ -1.14
NUP88-202ENST00000570937 OCLNQ16625 522 aa7.93□□□□□ -1.14
NUP88-202ENST00000570937 CLP1Q92989 425 aaKnown RBP7.93□□□□□ -1.14
NUP88-202ENST00000570937 ADAMTS2O95450 1211 aa7.92□□□□□ -1.14
NUP88-202ENST00000570937 TNP2Q05952 138 aa7.92□□□□□ -1.14
NUP88-202ENST00000570937 ABHD17AQ96GS6 310 aa7.92□□□□□ -1.14
NUP88-202ENST00000570937 ANKIB1Q9P2G1 1089 aa7.92□□□□□ -1.14
NUP88-202ENST00000570937 NSFL1CQ9UNZ2 370 aaKnown RBP7.92□□□□□ -1.14
NUP88-202ENST00000570937 GJA3Q9Y6H8 435 aa7.92□□□□□ -1.14
NUP88-202ENST00000570937 IGF1RP08069 1367 aa7.92□□□□□ -1.14
NUP88-202ENST00000570937 EFSO43281 561 aa7.91□□□□□ -1.14
NUP88-202ENST00000570937 FGFR3P22607 806 aa7.91□□□□□ -1.14
NUP88-202ENST00000570937 HIF1AQ16665 826 aa7.91□□□□□ -1.14
NUP88-202ENST00000570937 RTN1Q16799 776 aa7.91□□□□□ -1.14
NUP88-202ENST00000570937 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
NUP88-202ENST00000570937 KLRG1Q96E93 195 aa7.91□□□□□ -1.14
NUP88-202ENST00000570937 MAPTP10636 758 aaKnown RBP7.9□□□□□ -1.14
NUP88-202ENST00000570937 MAP2K3P46734 347 aa7.9□□□□□ -1.14
NUP88-202ENST00000570937 FKBP5Q13451 457 aaPredicted RBP7.9□□□□□ -1.14
NUP88-202ENST00000570937 LAMC2Q13753 1193 aa7.9□□□□□ -1.14
NUP88-202ENST00000570937 LRRC69Q6ZNQ3 347 aa7.9□□□□□ -1.14
NUP88-202ENST00000570937 PRIMPOLQ96LW4 560 aa7.9□□□□□ -1.14
NUP88-202ENST00000570937 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
NUP88-202ENST00000570937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.9□□□□□ -1.14
NUP88-202ENST00000570937 CXXC1Q9P0U4 656 aaPredicted RBP7.9□□□□□ -1.14
NUP88-202ENST00000570937 HCN2Q9UL51 889 aa7.9□□□□□ -1.14
NUP88-202ENST00000570937 PRMT3O60678 531 aa7.89□□□□□ -1.15
NUP88-202ENST00000570937 COL26A1Q96A83 441 aa7.89□□□□□ -1.15
NUP88-202ENST00000570937 MYO19Q96H55 970 aa7.89□□□□□ -1.15
NUP88-202ENST00000570937 SUSD3Q96L08 255 aa7.89□□□□□ -1.15
NUP88-202ENST00000570937 SLAIN2Q9P270 581 aa7.89□□□□□ -1.15
NUP88-202ENST00000570937 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 TMEM88BA6NKF7 163 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 KHNYNO15037 678 aaKnown RBP7.88□□□□□ -1.15
NUP88-202ENST00000570937 IER5Q5VY09 327 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 ZNF385CQ66K41 422 aaPredicted RBP7.88□□□□□ -1.15
NUP88-202ENST00000570937 ZNF280CQ8ND82 737 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 VTI1AQ96AJ9 217 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 NGLY1Q96IV0 654 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 HSH2DQ96JZ2 352 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
NUP88-202ENST00000570937 LRRC4BQ9NT99 713 aa7.88□□□□□ -1.15
NUP88-202ENST00000570937 C2CD2LO14523 706 aa7.87□□□□□ -1.15
NUP88-202ENST00000570937 CTBSQ01459 385 aa7.87□□□□□ -1.15
NUP88-202ENST00000570937 WHAMMQ8TF30 809 aa7.87□□□□□ -1.15
NUP88-202ENST00000570937 TGFBR3LH3BV60 316 aa7.86□□□□□ -1.15
NUP88-202ENST00000570937 BMP4P12644 408 aa7.86□□□□□ -1.15
NUP88-202ENST00000570937 KCNQ4P56696 695 aa7.86□□□□□ -1.15
NUP88-202ENST00000570937 LYPD4Q6UWN0 246 aa7.86□□□□□ -1.15
NUP88-202ENST00000570937 ACDQ96AP0 544 aa7.86□□□□□ -1.15
NUP88-202ENST00000570937 MARK1Q9P0L2 795 aa7.86□□□□□ -1.15
NUP88-202ENST00000570937 PTCD1O75127 700 aaKnown RBP7.85□□□□□ -1.15
NUP88-202ENST00000570937 ARHGEF15O94989 841 aa7.85□□□□□ -1.15
NUP88-202ENST00000570937 CELA2BP08218 269 aaPredicted RBP7.85□□□□□ -1.15
NUP88-202ENST00000570937 TYRO3Q06418 890 aa7.85□□□□□ -1.15
NUP88-202ENST00000570937 SVOPQ8N4V2 548 aa7.85□□□□□ -1.15
NUP88-202ENST00000570937 AVENQ9NQS1 362 aaPredicted RBP7.85□□□□□ -1.15
NUP88-202ENST00000570937 STRN4Q9NRL3 753 aa7.85□□□□□ -1.15
NUP88-202ENST00000570937 DMGDHQ9UI17 866 aaKnown RBP7.85□□□□□ -1.15
NUP88-202ENST00000570937 BCS1LQ9Y276 419 aa7.85□□□□□ -1.15
NUP88-202ENST00000570937 ARAFP10398 606 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 CD33P20138 364 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 ATP2B4P23634 1241 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 C11orf91Q3C1V1 193 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 BTLAQ7Z6A9 289 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 ARID3AQ99856 593 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 OXCT2Q9BYC2 517 aaPredicted RBP7.84□□□□□ -1.15
NUP88-202ENST00000570937 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 GDF2Q9UK05 429 aaPredicted RBP7.84□□□□□ -1.15
NUP88-202ENST00000570937 LRFN2Q9ULH4 789 aa7.84□□□□□ -1.15
NUP88-202ENST00000570937 BCRP11274 1271 aa7.83□□□□□ -1.16
NUP88-202ENST00000570937 DGKZQ13574 1117 aa7.83□□□□□ -1.16
NUP88-202ENST00000570937 COX20Q5RI15 118 aa7.83□□□□□ -1.16
NUP88-202ENST00000570937 CEP63Q96MT8 703 aa7.83□□□□□ -1.16
NUP88-202ENST00000570937 USTQ9Y2C2 406 aa7.83□□□□□ -1.16
NUP88-202ENST00000570937 SSFA2P28290 1259 aa7.82□□□□□ -1.16
NUP88-202ENST00000570937 SFSWAPQ12872 951 aaKnown RBP7.82□□□□□ -1.16
NUP88-202ENST00000570937 GOLGA6L1Q8N7Z2 621 aa7.82□□□□□ -1.16
NUP88-202ENST00000570937 KLK14Q9P0G3 267 aa7.82□□□□□ -1.16
NUP88-202ENST00000570937 OIP5O43482 229 aa7.81□□□□□ -1.16
NUP88-202ENST00000570937 MAP3K10Q02779 954 aa7.81□□□□□ -1.16
NUP88-202ENST00000570937 ZNF468Q5VIY5 522 aaPredicted RBP7.81□□□□□ -1.16
NUP88-202ENST00000570937 C16orf46Q6P387 395 aa7.81□□□□□ -1.16
NUP88-202ENST00000570937 SLCO4C1Q6ZQN7 724 aa7.81□□□□□ -1.16
NUP88-202ENST00000570937 CAPN12Q6ZSI9 719 aa7.81□□□□□ -1.16
NUP88-202ENST00000570937 KCNH4Q9UQ05 1017 aa7.81□□□□□ -1.16
NUP88-202ENST00000570937 MKNK1Q9BUB5 465 aa7.8□□□□□ -1.16
NUP88-202ENST00000570937 SAP130Q9H0E3 1048 aa7.8□□□□□ -1.16
NUP88-202ENST00000570937 ENAMQ9NRM1 1142 aa7.8□□□□□ -1.16
NUP88-202ENST00000570937 GGA1Q9UJY5 639 aa7.8□□□□□ -1.16
NUP88-202ENST00000570937 ADH6P28332 368 aa7.79□□□□□ -1.16
NUP88-202ENST00000570937 INPP5BP32019 993 aa7.79□□□□□ -1.16
NUP88-202ENST00000570937 GRIN2CQ14957 1233 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms