RNA–Protein interactions for RNA: ENST00000570856.1

GABARAP-202, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2

Gene GABARAP, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-202ENST00000570856 RPS6KA4O75676 772 aa17.15■□□□□ 0.34
GABARAP-202ENST00000570856 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
GABARAP-202ENST00000570856 IRX6P78412 446 aaPredicted RBP17.15■□□□□ 0.34
GABARAP-202ENST00000570856 FKBP8Q14318 412 aa17.15■□□□□ 0.34
GABARAP-202ENST00000570856 F6X3S4 739 aa17.14■□□□□ 0.33
GABARAP-202ENST00000570856 KCNQ4P56696 695 aa17.14■□□□□ 0.33
GABARAP-202ENST00000570856 BEND3Q5T5X7 828 aa17.14■□□□□ 0.33
GABARAP-202ENST00000570856 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
GABARAP-202ENST00000570856 DDX19BQ9UMR2 479 aa17.14■□□□□ 0.33
GABARAP-202ENST00000570856 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
GABARAP-202ENST00000570856 ERVV-1B6SEH8 477 aa17.13■□□□□ 0.33
GABARAP-202ENST00000570856 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
GABARAP-202ENST00000570856 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
GABARAP-202ENST00000570856 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
GABARAP-202ENST00000570856 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
GABARAP-202ENST00000570856 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
GABARAP-202ENST00000570856 C4AP0C0L4 1744 aa17.13■□□□□ 0.33
GABARAP-202ENST00000570856 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
GABARAP-202ENST00000570856 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
GABARAP-202ENST00000570856 MAP3K15Q6ZN16 1313 aa17.12■□□□□ 0.33
GABARAP-202ENST00000570856 QSER1Q2KHR3 1735 aa17.12■□□□□ 0.33
GABARAP-202ENST00000570856 COL15A1P39059 1388 aa17.12■□□□□ 0.33
GABARAP-202ENST00000570856 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
GABARAP-202ENST00000570856 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
GABARAP-202ENST00000570856 A0A087WZG4 1122 aa17.11■□□□□ 0.33
GABARAP-202ENST00000570856 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
GABARAP-202ENST00000570856 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
GABARAP-202ENST00000570856 CHMP4BQ9H444 224 aaKnown RBP17.11■□□□□ 0.33
GABARAP-202ENST00000570856 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
GABARAP-202ENST00000570856 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
GABARAP-202ENST00000570856 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
GABARAP-202ENST00000570856 GIGYF2Q6Y7W6 1299 aaKnown RBP17.1■□□□□ 0.33
GABARAP-202ENST00000570856 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
GABARAP-202ENST00000570856 BAG6P46379 1132 aa17.09■□□□□ 0.33
GABARAP-202ENST00000570856 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
GABARAP-202ENST00000570856 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
GABARAP-202ENST00000570856 ITPRIPQ8IWB1 547 aa17.09■□□□□ 0.33
GABARAP-202ENST00000570856 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
GABARAP-202ENST00000570856 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
GABARAP-202ENST00000570856 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
GABARAP-202ENST00000570856 CAMTA2O94983 1202 aa17.08■□□□□ 0.32
GABARAP-202ENST00000570856 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
GABARAP-202ENST00000570856 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
GABARAP-202ENST00000570856 TCIRG1Q13488 830 aa17.08■□□□□ 0.32
GABARAP-202ENST00000570856 SLC4A10Q6U841 1118 aa17.08■□□□□ 0.32
GABARAP-202ENST00000570856 ISCA1Q9BUE6 129 aa17.08■□□□□ 0.32
GABARAP-202ENST00000570856 UTYO14607 1347 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 GNPATO15228 680 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
GABARAP-202ENST00000570856 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 NPM2Q86SE8 214 aaKnown RBP17.07■□□□□ 0.32
GABARAP-202ENST00000570856 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 AK7Q96M32 723 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 NARFQ9UHQ1 456 aa17.07■□□□□ 0.32
GABARAP-202ENST00000570856 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
GABARAP-202ENST00000570856 SSFA2P28290 1259 aa17.06■□□□□ 0.32
GABARAP-202ENST00000570856 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
GABARAP-202ENST00000570856 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
GABARAP-202ENST00000570856 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
GABARAP-202ENST00000570856 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
GABARAP-202ENST00000570856 HLFQ16534 295 aa17.05■□□□□ 0.32
GABARAP-202ENST00000570856 ZNF34Q8IZ26 560 aa17.05■□□□□ 0.32
GABARAP-202ENST00000570856 MYD88Q99836 296 aa17.05■□□□□ 0.32
GABARAP-202ENST00000570856 PPP4R2Q9NY27 417 aa17.05■□□□□ 0.32
GABARAP-202ENST00000570856 GCKRQ14397 625 aa17.04■□□□□ 0.32
GABARAP-202ENST00000570856 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
GABARAP-202ENST00000570856 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
GABARAP-202ENST00000570856 TRAPPC3LQ5T215 181 aa17.04■□□□□ 0.32
GABARAP-202ENST00000570856 CCDC191Q8NCU4 936 aa17.04■□□□□ 0.32
GABARAP-202ENST00000570856 ARHGEF1Q92888 912 aaKnown RBP17.04■□□□□ 0.32
GABARAP-202ENST00000570856 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
GABARAP-202ENST00000570856 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
GABARAP-202ENST00000570856 GNAI3P08754 354 aa17.03■□□□□ 0.32
GABARAP-202ENST00000570856 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
GABARAP-202ENST00000570856 MEIS3Q99687 375 aa17.03■□□□□ 0.32
GABARAP-202ENST00000570856 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
GABARAP-202ENST00000570856 COL24A1Q17RW2 1714 aa17.03■□□□□ 0.32
GABARAP-202ENST00000570856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
GABARAP-202ENST00000570856 H7C1W4 665 aa17.02■□□□□ 0.32
GABARAP-202ENST00000570856 CASP7P55210 303 aa17.02■□□□□ 0.32
GABARAP-202ENST00000570856 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
GABARAP-202ENST00000570856 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
GABARAP-202ENST00000570856 GRM8O00222 908 aa17.01■□□□□ 0.31
GABARAP-202ENST00000570856 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
GABARAP-202ENST00000570856 ZNF652Q9Y2D9 606 aa17.01■□□□□ 0.31
GABARAP-202ENST00000570856 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
GABARAP-202ENST00000570856 NBPF7P0C2Y1 421 aaPredicted RBP17■□□□□ 0.31
GABARAP-202ENST00000570856 SLC15A2Q16348 729 aa17■□□□□ 0.31
GABARAP-202ENST00000570856 NLRP10Q86W26 655 aa17■□□□□ 0.31
GABARAP-202ENST00000570856 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
GABARAP-202ENST00000570856 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
GABARAP-202ENST00000570856 ZPR1O75312 459 aa16.99■□□□□ 0.31
GABARAP-202ENST00000570856 RFC4P35249 363 aa16.99■□□□□ 0.31
GABARAP-202ENST00000570856 PARP10Q53GL7 1025 aa16.99■□□□□ 0.31
GABARAP-202ENST00000570856 USPL1Q5W0Q7 1092 aa16.99■□□□□ 0.31
GABARAP-202ENST00000570856 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
GABARAP-202ENST00000570856 UBN2Q6ZU65 1347 aa16.98■□□□□ 0.31
GABARAP-202ENST00000570856 LAMB2P55268 1798 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms