RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 GORABQ5T7V8 394 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 PMFBP1Q8TBY8 1022 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 TMA7Q9Y2S6 64 aaKnown RBP9.93□□□□□ -0.82
TCF4-246ENST00000570287 ZNF211Q13398 564 aaPredicted RBP9.92□□□□□ -0.82
TCF4-246ENST00000570287 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
TCF4-246ENST00000570287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.92□□□□□ -0.82
TCF4-246ENST00000570287 DEPDC4Q8N2C3 294 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 UBR1Q8IWV7 1749 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 TMEM2Q9UHN6 1383 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 GOLGA6L3A6NEY3 463 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 VAMP1P23763 118 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 PRKAG2Q9UGJ0 569 aa9.92□□□□□ -0.82
TCF4-246ENST00000570287 RNF19AQ9NV58 838 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 MAP2P11137 1827 aaKnown RBP9.91□□□□□ -0.82
TCF4-246ENST00000570287 ARID4AP29374 1257 aaPredicted RBP9.91□□□□□ -0.82
TCF4-246ENST00000570287 RIPK4P57078 832 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 DMGDHQ9UI17 866 aaKnown RBP9.91□□□□□ -0.82
TCF4-246ENST00000570287 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 AATKQ6ZMQ8 1374 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 LRRC7Q96NW7 1537 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 TLDC2A0PJX2 215 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 ZKSCAN2Q63HK3 967 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 DPY19L2Q6NUT2 758 aa9.91□□□□□ -0.82
TCF4-246ENST00000570287 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
TCF4-246ENST00000570287 ISY1Q9ULR0 285 aaKnown RBP9.91□□□□□ -0.82
TCF4-246ENST00000570287 RLBP1P12271 317 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 RGS3P49796 1198 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 CTDSPL2Q05D32 466 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 TSR2Q969E8 191 aaKnown RBP9.9□□□□□ -0.82
TCF4-246ENST00000570287 PRM3Q9NNZ6 103 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 TBX22Q9Y458 520 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.82
TCF4-246ENST00000570287 SDE2Q6IQ49 451 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 NT5DC4Q86YG4 428 aa9.9□□□□□ -0.82
TCF4-246ENST00000570287 AKAP12Q02952 1782 aa9.9□□□□□ -0.83
TCF4-246ENST00000570287 CDK12Q9NYV4 1490 aaPredicted RBP9.9□□□□□ -0.83
TCF4-246ENST00000570287 TINF2Q9BSI4 451 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 ERBB4Q15303 1308 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 hCG_2014768A0A024R1R8 64 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 MRE11P49959 708 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 MVPQ14764 893 aaKnown RBP9.89□□□□□ -0.83
TCF4-246ENST00000570287 RSBN1LQ6PCB5 846 aaPredicted RBP9.89□□□□□ -0.83
TCF4-246ENST00000570287 LRRN4Q8WUT4 740 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 PANK2Q9BZ23 570 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 ITSN1Q15811 1721 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 ESPNB1AK53 854 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 PTPROQ16827 1216 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 DZIP1LQ8IYY4 767 aaKnown RBP9.89□□□□□ -0.83
TCF4-246ENST00000570287 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
TCF4-246ENST00000570287 ADAMTS13Q76LX8 1427 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 MTMR3Q13615 1198 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 BECN1Q14457 450 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 JAZF1Q86VZ6 243 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 C3P01024 1663 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 PLEKHG1Q9ULL1 1385 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 ABL1P00519 1130 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 SLFNL1Q499Z3 407 aa9.88□□□□□ -0.83
TCF4-246ENST00000570287 RBM33Q96EV2 1170 aaKnown RBP9.88□□□□□ -0.83
TCF4-246ENST00000570287 RWDD1Q9H446 243 aaPredicted RBP9.88□□□□□ -0.83
TCF4-246ENST00000570287 LILRB3O75022 631 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 TERF1P54274 439 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 WASHC4Q2M389 1173 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 NME9Q86XW9 330 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 COG3Q96JB2 828 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 IL13P35225 146 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 SSH1Q8WYL5 1049 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 G3BP2Q9UN86 482 aaKnown RBP9.87□□□□□ -0.83
TCF4-246ENST00000570287 ROBO2Q9HCK4 1378 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 ZSWIM4Q9H7M6 989 aa9.87□□□□□ -0.83
TCF4-246ENST00000570287 ALDH1L2Q3SY69 923 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 PMM1Q92871 262 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 EMILIN1Q9Y6C2 1016 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
TCF4-246ENST00000570287 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
TCF4-246ENST00000570287 FBLN1P23142 703 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 ATF7IPQ6VMQ6 1270 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
TCF4-246ENST00000570287 KIF16BQ96L93 1317 aa9.86□□□□□ -0.83
TCF4-246ENST00000570287 H3BRB1 525 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 LGR5O75473 907 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 TRIM27P14373 513 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 NOP9Q86U38 636 aaKnown RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 DDX19BQ9UMR2 479 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 PRR36Q9H6K5 1346 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 IPO8O15397 1037 aaKnown RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 DNAJA1P31689 397 aaKnown RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 ATP9BO43861 1147 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 MCM4P33991 863 aa9.85□□□□□ -0.83
TCF4-246ENST00000570287 L3MBTL3Q96JM7 780 aaPredicted RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 MRPL42Q9Y6G3 142 aaKnown RBP9.85□□□□□ -0.83
TCF4-246ENST00000570287 METTL16Q86W50 562 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms