RNA–Protein interactions for RNA: ENST00000569997.1

COX4I1-217, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

Gene COX4I1, Length 3,946 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-217ENST00000569997 SSH2Q76I76 1423 aa11.34□□□□□ -0.59
COX4I1-217ENST00000569997 UBR1Q8IWV7 1749 aa11.34□□□□□ -0.59
COX4I1-217ENST00000569997 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
COX4I1-217ENST00000569997 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
COX4I1-217ENST00000569997 ARHGAP23Q9P227 1491 aa11.34□□□□□ -0.59
COX4I1-217ENST00000569997 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
COX4I1-217ENST00000569997 BLOC1S2Q6QNY1 142 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 ZSCAN31Q96LW9 406 aaPredicted RBP11.33□□□□□ -0.6
COX4I1-217ENST00000569997 BICC1Q9H694 974 aaKnown RBP11.33□□□□□ -0.6
COX4I1-217ENST00000569997 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 SLIT1O75093 1534 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 CCDC173Q0VFZ6 552 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 PROSER3Q2NL68 480 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
COX4I1-217ENST00000569997 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 H3BQV1 296 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
COX4I1-217ENST00000569997 FIBPO43427 364 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 UNC5CLQ8IV45 518 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 SGSM2O43147 1006 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
COX4I1-217ENST00000569997 CCDC83Q8IWF9 413 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 SYTL4Q96C24 671 aaPredicted RBP11.32□□□□□ -0.6
COX4I1-217ENST00000569997 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 ANKRD1Q15327 319 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
COX4I1-217ENST00000569997 SUCLG2Q96I99 432 aa11.32□□□□□ -0.6
COX4I1-217ENST00000569997 PDCP20941 246 aa11.31□□□□□ -0.6
COX4I1-217ENST00000569997 ZNF496Q96IT1 587 aaPredicted RBP11.31□□□□□ -0.6
COX4I1-217ENST00000569997 PALD1Q9ULE6 856 aa11.31□□□□□ -0.6
COX4I1-217ENST00000569997 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.31□□□□□ -0.6
COX4I1-217ENST00000569997 ERBB3P21860 1342 aa11.31□□□□□ -0.6
COX4I1-217ENST00000569997 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
COX4I1-217ENST00000569997 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
COX4I1-217ENST00000569997 AXIN2Q9Y2T1 843 aa11.31□□□□□ -0.6
COX4I1-217ENST00000569997 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
COX4I1-217ENST00000569997 SYCE3A1L190 88 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 POLA2Q14181 598 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 ZCRB1Q8TBF4 217 aaKnown RBP11.3□□□□□ -0.6
COX4I1-217ENST00000569997 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
COX4I1-217ENST00000569997 MON2Q7Z3U7 1717 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 RGS12O14924 1447 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 PHKG2P15735 406 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 HSPA2P54652 639 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 C3P01024 1663 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 HSPA4P34932 840 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 LARP1BQ659C4 914 aaKnown RBP11.3□□□□□ -0.6
COX4I1-217ENST00000569997 KIF6Q6ZMV9 814 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
COX4I1-217ENST00000569997 RAD50Q92878 1312 aa11.3□□□□□ -0.6
COX4I1-217ENST00000569997 SETD1BQ9UPS6 1966 aaKnown RBP11.29□□□□□ -0.6
COX4I1-217ENST00000569997 EPB41L2O43491 1005 aaKnown RBP11.29□□□□□ -0.6
COX4I1-217ENST00000569997 TSPY26PQ9H489 355 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
COX4I1-217ENST00000569997 ESPNB1AK53 854 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 STK3Q13188 491 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 PKP1Q13835 747 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 KRT32Q14532 448 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 ZSCAN23Q3MJ62 389 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 RBM8AQ9Y5S9 174 aaKnown RBP11.29□□□□□ -0.6
COX4I1-217ENST00000569997 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 AK2P54819 239 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 GCKRQ14397 625 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 CWC25Q9NXE8 425 aaPredicted RBP11.29□□□□□ -0.6
COX4I1-217ENST00000569997 SNX14Q9Y5W7 946 aa11.29□□□□□ -0.6
COX4I1-217ENST00000569997 STX6O43752 255 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
COX4I1-217ENST00000569997 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 CHMP4CQ96CF2 233 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
COX4I1-217ENST00000569997 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.6
COX4I1-217ENST00000569997 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.6
COX4I1-217ENST00000569997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.6
COX4I1-217ENST00000569997 FSD2A1L4K1 749 aa11.27□□□□□ -0.61
COX4I1-217ENST00000569997 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
COX4I1-217ENST00000569997 CPA1P15085 419 aa11.27□□□□□ -0.61
COX4I1-217ENST00000569997 GJB2P29033 226 aa11.27□□□□□ -0.61
COX4I1-217ENST00000569997 NCAPD2Q15021 1401 aa11.27□□□□□ -0.61
COX4I1-217ENST00000569997 CCDC85AQ96PX6 553 aaPredicted RBP11.27□□□□□ -0.61
COX4I1-217ENST00000569997 LMBRD1Q9NUN5 540 aa11.27□□□□□ -0.61
COX4I1-217ENST00000569997 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
COX4I1-217ENST00000569997 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
COX4I1-217ENST00000569997 KRT85P78386 507 aa11.26□□□□□ -0.61
COX4I1-217ENST00000569997 FKBP4Q02790 459 aaKnown RBP eCLIP11.26□□□□□ -0.61
COX4I1-217ENST00000569997 TTC39AQ5SRH9 613 aa11.26□□□□□ -0.61
COX4I1-217ENST00000569997 BICD2Q8TD16 824 aa11.26□□□□□ -0.61
COX4I1-217ENST00000569997 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms