RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 USP17L12C9JPN9 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L11C9JVI0 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L21D6R901 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L18D6R9N7 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L22D6RA61 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L17D6RBQ6 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L19D6RCP7 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L20D6RJB6 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 C2CD2LO14523 706 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 ADH6P28332 368 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 USP17L24Q0WX57 530 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 PHLDB3Q6NSJ2 640 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 NIFKQ9BYG3 293 aaKnown RBP6.32□□□□□ -1.4
UBR1-211ENST00000569971 SLAIN2Q9P270 581 aa6.32□□□□□ -1.4
UBR1-211ENST00000569971 LZTS3O60299 673 aaPredicted RBP6.31□□□□□ -1.4
UBR1-211ENST00000569971 INHAP05111 366 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 ATP4AP20648 1035 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 GRIN2CQ14957 1233 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 B4GALNT3Q6L9W6 998 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 FAM200AQ8TCP9 573 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 BTBD6Q96KE9 485 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 ZDHHC3Q9NYG2 299 aa6.31□□□□□ -1.4
UBR1-211ENST00000569971 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 SCNN1DP51172 638 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 CTBSQ01459 385 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 FAM69CQ0P6D2 419 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 DPYDQ12882 1025 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 LAMC2Q13753 1193 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 EML3Q32P44 896 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 NBPF1Q3BBV0 1214 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 SAMD5Q5TGI4 173 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 ANKMY2Q8IV38 441 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 OGFOD1Q8N543 542 aa6.3□□□□□ -1.4
UBR1-211ENST00000569971 GNEQ9Y223 722 aaKnown RBP6.3□□□□□ -1.4
UBR1-211ENST00000569971 ATXN7O15265 892 aaPredicted RBP6.29□□□□□ -1.4
UBR1-211ENST00000569971 FAM157BP0CG42 384 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 SSFA2P28290 1259 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 GDF10P55107 478 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 CLDN10P78369 228 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 MTFR1Q15390 333 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 SND1Q7KZF4 910 aaKnown RBP eCLIP6.29□□□□□ -1.4
UBR1-211ENST00000569971 ZNF594Q96JF6 807 aaPredicted RBP6.29□□□□□ -1.4
UBR1-211ENST00000569971 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 ZCCHC2Q9C0B9 1178 aaKnown RBP6.29□□□□□ -1.4
UBR1-211ENST00000569971 NOD1Q9Y239 953 aa6.29□□□□□ -1.4
UBR1-211ENST00000569971 C1QTNF9BB2RNN3 333 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
UBR1-211ENST00000569971 SMTNP53814 917 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 CCDC27Q2M243 656 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 OXLD1Q5BKU9 147 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 CHSY3Q70JA7 882 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 TXNDC2Q86VQ3 553 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 TRIM50Q86XT4 487 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 ZNF295-AS1Q8N0V1 137 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 Q8N3U1 123 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 ZNF428Q96B54 188 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 SUV39H2Q9H5I1 410 aa6.28□□□□□ -1.4
UBR1-211ENST00000569971 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
UBR1-211ENST00000569971 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
UBR1-211ENST00000569971 NEURL1BA8MQ27 555 aa6.27□□□□□ -1.41
UBR1-211ENST00000569971 CDK2AP1O14519 115 aa6.27□□□□□ -1.41
UBR1-211ENST00000569971 TATP17735 454 aaPredicted RBP6.27□□□□□ -1.41
UBR1-211ENST00000569971 TNP2Q05952 138 aa6.27□□□□□ -1.41
UBR1-211ENST00000569971 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
UBR1-211ENST00000569971 CD163Q86VB7 1156 aa6.27□□□□□ -1.41
UBR1-211ENST00000569971 CCER1Q8TC90 406 aaPredicted RBP6.27□□□□□ -1.41
UBR1-211ENST00000569971 CLP1Q92989 425 aaKnown RBP6.27□□□□□ -1.41
UBR1-211ENST00000569971 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 FURINP09958 794 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 SPATA31C1P0DKV0 1188 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 MAPTP10636 758 aaKnown RBP6.26□□□□□ -1.41
UBR1-211ENST00000569971 ARID4AP29374 1257 aaPredicted RBP6.26□□□□□ -1.41
UBR1-211ENST00000569971 SCNN1AP37088 669 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 ATP1A2P50993 1020 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 GTF2IP78347 998 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 LARGE2Q8N3Y3 721 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 IQSEC3Q9UPP2 1182 aaPredicted RBP6.26□□□□□ -1.41
UBR1-211ENST00000569971 KIAA1024Q9UPX6 916 aa6.26□□□□□ -1.41
UBR1-211ENST00000569971 A0A1W2PNR3 127 aa6.25□□□□□ -1.41
UBR1-211ENST00000569971 DKK1O94907 266 aa6.25□□□□□ -1.41
UBR1-211ENST00000569971 ATP2B4P23634 1241 aa6.25□□□□□ -1.41
UBR1-211ENST00000569971 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
UBR1-211ENST00000569971 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
UBR1-211ENST00000569971 A6NJY4 79 aa6.24□□□□□ -1.41
UBR1-211ENST00000569971 EFSO43281 561 aa6.24□□□□□ -1.41
UBR1-211ENST00000569971 CHRNA4P43681 627 aa6.24□□□□□ -1.41
UBR1-211ENST00000569971 PSME1Q06323 249 aa6.24□□□□□ -1.41
UBR1-211ENST00000569971 ARSJQ5FYB0 599 aaPredicted RBP6.24□□□□□ -1.41
UBR1-211ENST00000569971 CCDC102BQ68D86 513 aa6.24□□□□□ -1.41
UBR1-211ENST00000569971 PCDHGA11Q9Y5H2 935 aa6.24□□□□□ -1.41
UBR1-211ENST00000569971 DCDC2BA2VCK2 349 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 SFI1A8K8P3 1242 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 BACH1O14867 736 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 LGR5O75473 907 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 SEC13P55735 322 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 SWI5Q1ZZU3 235 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 SIX5Q8N196 739 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 TPCN2Q8NHX9 752 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 AIDAQ96BJ3 306 aa6.23□□□□□ -1.41
UBR1-211ENST00000569971 PRIMPOLQ96LW4 560 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms