RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 PIBF1Q8WXW3 757 aa17.12■□□□□ 0.33
GCOM1-213ENST00000569945 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
GCOM1-213ENST00000569945 CGNQ9P2M7 1197 aaKnown RBP17.11■□□□□ 0.33
GCOM1-213ENST00000569945 RBM27Q9P2N5 1060 aaKnown RBP17.11■□□□□ 0.33
GCOM1-213ENST00000569945 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
GCOM1-213ENST00000569945 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
GCOM1-213ENST00000569945 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
GCOM1-213ENST00000569945 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
GCOM1-213ENST00000569945 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
GCOM1-213ENST00000569945 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 TMEM63CQ9P1W3 806 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 RGS12O14924 1447 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 NUCB2P80303 420 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 ANKRD7Q92527 254 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 ACSBG1Q96GR2 724 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 CEMIPQ8WUJ3 1361 aa17.09■□□□□ 0.33
GCOM1-213ENST00000569945 TOGARAM1Q9Y4F4 1720 aa17.08■□□□□ 0.33
GCOM1-213ENST00000569945 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.33
GCOM1-213ENST00000569945 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.33
GCOM1-213ENST00000569945 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.33
GCOM1-213ENST00000569945 TSR2Q969E8 191 aaKnown RBP17.08■□□□□ 0.33
GCOM1-213ENST00000569945 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
GCOM1-213ENST00000569945 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.32
GCOM1-213ENST00000569945 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
GCOM1-213ENST00000569945 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
GCOM1-213ENST00000569945 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
GCOM1-213ENST00000569945 IGSF3O75054 1194 aa17.07■□□□□ 0.32
GCOM1-213ENST00000569945 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
GCOM1-213ENST00000569945 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
GCOM1-213ENST00000569945 SPTLC3Q9NUV7 552 aa17.07■□□□□ 0.32
GCOM1-213ENST00000569945 SYCE3A1L190 88 aa17.07■□□□□ 0.32
GCOM1-213ENST00000569945 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
GCOM1-213ENST00000569945 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
GCOM1-213ENST00000569945 ADAMTS7Q9UKP4 1686 aa17.06■□□□□ 0.32
GCOM1-213ENST00000569945 KCNQ3O43525 872 aa17.06■□□□□ 0.32
GCOM1-213ENST00000569945 U2AF2P26368 475 aaKnown RBP eCLIP17.06■□□□□ 0.32
GCOM1-213ENST00000569945 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
GCOM1-213ENST00000569945 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
GCOM1-213ENST00000569945 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
GCOM1-213ENST00000569945 KCNQ2O43526 872 aa17.05■□□□□ 0.32
GCOM1-213ENST00000569945 NUCB1Q02818 461 aa17.05■□□□□ 0.32
GCOM1-213ENST00000569945 SLC20A2Q08357 652 aa17.05■□□□□ 0.32
GCOM1-213ENST00000569945 DZIP1LQ8IYY4 767 aaKnown RBP17.05■□□□□ 0.32
GCOM1-213ENST00000569945 FEZ1Q99689 392 aa17.05■□□□□ 0.32
GCOM1-213ENST00000569945 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
GCOM1-213ENST00000569945 PKP1Q13835 747 aa17.05■□□□□ 0.32
GCOM1-213ENST00000569945 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
GCOM1-213ENST00000569945 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
GCOM1-213ENST00000569945 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
GCOM1-213ENST00000569945 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
GCOM1-213ENST00000569945 PTMAP06454 111 aaKnown RBP17.04■□□□□ 0.32
GCOM1-213ENST00000569945 TEFQ10587 303 aa17.04■□□□□ 0.32
GCOM1-213ENST00000569945 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
GCOM1-213ENST00000569945 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
GCOM1-213ENST00000569945 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
GCOM1-213ENST00000569945 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
GCOM1-213ENST00000569945 CABP4P57796 275 aa17.03■□□□□ 0.32
GCOM1-213ENST00000569945 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
GCOM1-213ENST00000569945 TAF7Q15545 349 aaPredicted RBP17.03■□□□□ 0.32
GCOM1-213ENST00000569945 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
GCOM1-213ENST00000569945 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
GCOM1-213ENST00000569945 GABPB1Q06547 395 aaPredicted RBP17.02■□□□□ 0.32
GCOM1-213ENST00000569945 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
GCOM1-213ENST00000569945 PIGBQ92521 554 aa17.02■□□□□ 0.32
GCOM1-213ENST00000569945 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
GCOM1-213ENST00000569945 CHL1O00533 1208 aa17.02■□□□□ 0.31
GCOM1-213ENST00000569945 CTIFO43310 598 aaKnown RBP17.02■□□□□ 0.31
GCOM1-213ENST00000569945 IFT57Q9NWB7 429 aa17.02■□□□□ 0.31
GCOM1-213ENST00000569945 OGFRQ9NZT2 677 aa17.02■□□□□ 0.31
GCOM1-213ENST00000569945 ZDHHC9Q9Y397 364 aa17.02■□□□□ 0.31
GCOM1-213ENST00000569945 ITGB4P16144 1822 aa17.01■□□□□ 0.31
GCOM1-213ENST00000569945 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
GCOM1-213ENST00000569945 BTBD11A6QL63 1104 aa17.01■□□□□ 0.31
GCOM1-213ENST00000569945 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
GCOM1-213ENST00000569945 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
GCOM1-213ENST00000569945 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
GCOM1-213ENST00000569945 TBC1D9Q6ZT07 1266 aa17.01■□□□□ 0.31
GCOM1-213ENST00000569945 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
GCOM1-213ENST00000569945 MRC1P22897 1456 aa17■□□□□ 0.31
GCOM1-213ENST00000569945 IL16Q14005 1332 aa17■□□□□ 0.31
GCOM1-213ENST00000569945 SLFN14P0C7P3 912 aa17■□□□□ 0.31
GCOM1-213ENST00000569945 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
GCOM1-213ENST00000569945 GNAI1P63096 354 aa16.99■□□□□ 0.31
GCOM1-213ENST00000569945 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
GCOM1-213ENST00000569945 C17orf53Q8N3J3 647 aaPredicted RBP16.99■□□□□ 0.31
GCOM1-213ENST00000569945 TMOD3Q9NYL9 352 aa16.99■□□□□ 0.31
GCOM1-213ENST00000569945 CHD1LQ86WJ1 897 aa16.99■□□□□ 0.31
GCOM1-213ENST00000569945 LNPKQ9C0E8 428 aa16.99■□□□□ 0.31
GCOM1-213ENST00000569945 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
GCOM1-213ENST00000569945 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
GCOM1-213ENST00000569945 TRIM27P14373 513 aa16.98■□□□□ 0.31
GCOM1-213ENST00000569945 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
GCOM1-213ENST00000569945 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
GCOM1-213ENST00000569945 CWC22Q9HCG8 908 aaKnown RBP16.98■□□□□ 0.31
GCOM1-213ENST00000569945 ZBTB40Q9NUA8 1239 aa16.98■□□□□ 0.31
GCOM1-213ENST00000569945 RIOK3O14730 519 aaKnown RBP16.97■□□□□ 0.31
GCOM1-213ENST00000569945 KCNJ4P48050 445 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms