RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 G3BP1Q13283 466 aaKnown RBP eCLIP7.41□□□□□ -1.22
CYLD-216ENST00000569891 JCADQ9P266 1359 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 BRCA1P38398 1863 aaKnown RBP7.41□□□□□ -1.22
CYLD-216ENST00000569891 ANKRD13DQ6ZTN6 518 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 MEIS3Q99687 375 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 MAP3K2Q9Y2U5 619 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 SPATA31A6Q5VVP1 1343 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 DDB1Q16531 1140 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 CLASRPQ8N2M8 674 aaKnown RBP7.41□□□□□ -1.22
CYLD-216ENST00000569891 HEG1Q9ULI3 1381 aa7.41□□□□□ -1.22
CYLD-216ENST00000569891 F6X3S4 739 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 PLBD2Q8NHP8 589 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 RGS12O14924 1447 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 CYP27B1O15528 508 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 SCN11AQ9UI33 1791 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 HIP1O00291 1037 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 LRRFIP1Q32MZ4 808 aaKnown RBP7.4□□□□□ -1.22
CYLD-216ENST00000569891 MEX3CQ5U5Q3 659 aaKnown RBP7.4□□□□□ -1.22
CYLD-216ENST00000569891 G2E3Q7L622 706 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 RUFY2Q8WXA3 655 aa7.4□□□□□ -1.22
CYLD-216ENST00000569891 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.22
CYLD-216ENST00000569891 GRM8O00222 908 aa7.4□□□□□ -1.23
CYLD-216ENST00000569891 PIP4K2BP78356 416 aa7.4□□□□□ -1.23
CYLD-216ENST00000569891 SURF6O75683 361 aaKnown RBP7.39□□□□□ -1.23
CYLD-216ENST00000569891 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
CYLD-216ENST00000569891 SRGAP3O43295 1099 aa7.39□□□□□ -1.23
CYLD-216ENST00000569891 AIMP1Q12904 312 aaKnown RBP7.39□□□□□ -1.23
CYLD-216ENST00000569891 HSCBQ8IWL3 235 aa7.39□□□□□ -1.23
CYLD-216ENST00000569891 ZNF496Q96IT1 587 aaPredicted RBP7.39□□□□□ -1.23
CYLD-216ENST00000569891 KDM6AO15550 1401 aaPredicted RBP7.39□□□□□ -1.23
CYLD-216ENST00000569891 EPB41L2O43491 1005 aaKnown RBP7.39□□□□□ -1.23
CYLD-216ENST00000569891 BEND3Q5T5X7 828 aa7.39□□□□□ -1.23
CYLD-216ENST00000569891 USP35Q9P2H5 1018 aa7.39□□□□□ -1.23
CYLD-216ENST00000569891 A0A087WZG4 1122 aa7.39□□□□□ -1.23
CYLD-216ENST00000569891 BARGINQ6ZT62 677 aa7.39□□□□□ -1.23
CYLD-216ENST00000569891 IFIT2P09913 472 aaKnown RBP7.38□□□□□ -1.23
CYLD-216ENST00000569891 SSH3Q8TE77 659 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 XAGE3Q8WTP9 111 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 NGLY1Q96IV0 654 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 LAMA5O15230 3695 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 NUTM2BA6NNL0 878 aaPredicted RBP7.38□□□□□ -1.23
CYLD-216ENST00000569891 NUTM2EB1AL46 878 aaPredicted RBP7.38□□□□□ -1.23
CYLD-216ENST00000569891 MYL6BP14649 208 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 NUTM2AQ8IVF1 878 aaPredicted RBP7.38□□□□□ -1.23
CYLD-216ENST00000569891 CWC25Q9NXE8 425 aaPredicted RBP7.38□□□□□ -1.23
CYLD-216ENST00000569891 LAMA1P25391 3075 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 A0A0G2JS52 829 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 ADAMTS2O95450 1211 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 SLC39A6Q13433 755 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 MTX1Q13505 466 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 COPS6Q7L5N1 327 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 CNTROBQ8N137 903 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 PHAXQ9H814 394 aaKnown RBP7.38□□□□□ -1.23
CYLD-216ENST00000569891 SLIT2O94813 1529 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 TJP1Q07157 1748 aa7.38□□□□□ -1.23
CYLD-216ENST00000569891 CCDC191Q8NCU4 936 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 ZNF652Q9Y2D9 606 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 TTC22Q5TAA0 569 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 TNS2Q63HR2 1409 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 TTC41PQ6P2S7 1318 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 KIAA1211Q6ZU35 1233 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 RBM42Q9BTD8 480 aaKnown RBP7.37□□□□□ -1.23
CYLD-216ENST00000569891 C22orf23Q9BZE7 217 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 USP44Q9H0E7 712 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 GLRX3O76003 335 aaKnown RBP7.37□□□□□ -1.23
CYLD-216ENST00000569891 MX1P20591 662 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 TICAM2Q86XR7 235 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 MYD88Q99836 296 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 HSP90AA1P07900 732 aaKnown RBP7.37□□□□□ -1.23
CYLD-216ENST00000569891 MFAP1P55081 439 aaKnown RBP7.37□□□□□ -1.23
CYLD-216ENST00000569891 PPP1R42Q7Z4L9 355 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 UNC5CLQ8IV45 518 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 SYTL4Q96C24 671 aaPredicted RBP7.37□□□□□ -1.23
CYLD-216ENST00000569891 FBXO3Q9UK99 471 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 CHD7Q9P2D1 2997 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 LRP6O75581 1613 aa7.37□□□□□ -1.23
CYLD-216ENST00000569891 BSNQ9UPA5 3926 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 ZNF831Q5JPB2 1677 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 KCNQ3O43525 872 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 TAF7LQ5H9L4 462 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 ANP32EQ9BTT0 268 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 COL15A1P39059 1388 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 ARXQ96QS3 562 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 C4AP0C0L4 1744 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 C4BP0C0L5 1744 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 LOC400499M0QZD8 3231 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 UTYO14607 1347 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 SPATA31A1Q5TZJ5 1347 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 APBB1O00213 710 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 PTMSP20962 102 aa7.36□□□□□ -1.23
CYLD-216ENST00000569891 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
CYLD-216ENST00000569891 GCKRQ14397 625 aa7.35□□□□□ -1.23
CYLD-216ENST00000569891 ST18O60284 1047 aa7.35□□□□□ -1.23
CYLD-216ENST00000569891 POLA2Q14181 598 aa7.35□□□□□ -1.23
CYLD-216ENST00000569891 RHPN1Q8TCX5 695 aa7.35□□□□□ -1.23
CYLD-216ENST00000569891 NEURL1BA8MQ27 555 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms