RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
CAPN3-219ENST00000569136 TATDN2Q93075 761 aa12.34□□□□□ -0.43
CAPN3-219ENST00000569136 AK7Q96M32 723 aa12.34□□□□□ -0.43
CAPN3-219ENST00000569136 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
CAPN3-219ENST00000569136 SEPT9Q9UHD8 586 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-219ENST00000569136 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
CAPN3-219ENST00000569136 MYOM1P52179 1685 aa12.33□□□□□ -0.44
CAPN3-219ENST00000569136 CYP27B1O15528 508 aa12.33□□□□□ -0.44
CAPN3-219ENST00000569136 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-219ENST00000569136 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.44
CAPN3-219ENST00000569136 PTF1AQ7RTS3 328 aa12.33□□□□□ -0.44
CAPN3-219ENST00000569136 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
CAPN3-219ENST00000569136 SYTL4Q96C24 671 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-219ENST00000569136 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
CAPN3-219ENST00000569136 OATP04181 439 aa12.32□□□□□ -0.44
CAPN3-219ENST00000569136 TXNRD1Q16881 649 aa12.32□□□□□ -0.44
CAPN3-219ENST00000569136 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
CAPN3-219ENST00000569136 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
CAPN3-219ENST00000569136 RALBP1Q15311 655 aa12.31□□□□□ -0.44
CAPN3-219ENST00000569136 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
CAPN3-219ENST00000569136 BRWD3Q6RI45 1802 aa12.31□□□□□ -0.44
CAPN3-219ENST00000569136 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
CAPN3-219ENST00000569136 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
CAPN3-219ENST00000569136 C3orf80F5H4A9 247 aa12.3□□□□□ -0.44
CAPN3-219ENST00000569136 PHKG2P15735 406 aa12.3□□□□□ -0.44
CAPN3-219ENST00000569136 PPP2R1AP30153 589 aa12.3□□□□□ -0.44
CAPN3-219ENST00000569136 SMARCC1Q92922 1105 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-219ENST00000569136 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
CAPN3-219ENST00000569136 MEGF6O75095 1541 aa12.29□□□□□ -0.44
CAPN3-219ENST00000569136 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
CAPN3-219ENST00000569136 R3HDM1Q15032 1099 aaKnown RBP12.29□□□□□ -0.44
CAPN3-219ENST00000569136 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
CAPN3-219ENST00000569136 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
CAPN3-219ENST00000569136 LTN1O94822 1766 aa12.28□□□□□ -0.44
CAPN3-219ENST00000569136 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-219ENST00000569136 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
CAPN3-219ENST00000569136 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
CAPN3-219ENST00000569136 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
CAPN3-219ENST00000569136 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
CAPN3-219ENST00000569136 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.45
CAPN3-219ENST00000569136 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
CAPN3-219ENST00000569136 TMOD3Q9NYL9 352 aa12.27□□□□□ -0.45
CAPN3-219ENST00000569136 RGPD5Q99666 1765 aa12.27□□□□□ -0.45
CAPN3-219ENST00000569136 KDRP35968 1356 aa12.27□□□□□ -0.45
CAPN3-219ENST00000569136 KIF20BQ96Q89 1820 aa12.26□□□□□ -0.45
CAPN3-219ENST00000569136 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
CAPN3-219ENST00000569136 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
CAPN3-219ENST00000569136 PIGBQ92521 554 aa12.26□□□□□ -0.45
CAPN3-219ENST00000569136 TRIM66O15016 1216 aa12.25□□□□□ -0.45
CAPN3-219ENST00000569136 HRO43593 1189 aa12.25□□□□□ -0.45
CAPN3-219ENST00000569136 HMOX1P09601 288 aa12.25□□□□□ -0.45
CAPN3-219ENST00000569136 SLC15A2Q16348 729 aa12.25□□□□□ -0.45
CAPN3-219ENST00000569136 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
CAPN3-219ENST00000569136 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
CAPN3-219ENST00000569136 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
CAPN3-219ENST00000569136 BHMG1C9JSJ3 638 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
CAPN3-219ENST00000569136 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 CABP4P57796 275 aa12.24□□□□□ -0.45
CAPN3-219ENST00000569136 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
CAPN3-219ENST00000569136 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 FAM208AQ9UK61 1670 aaKnown RBP12.24□□□□□ -0.45
CAPN3-219ENST00000569136 SRCAPQ6ZRS2 3230 aa12.24□□□□□ -0.45
CAPN3-219ENST00000569136 DNAJB2P25686 324 aa12.23□□□□□ -0.45
CAPN3-219ENST00000569136 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
CAPN3-219ENST00000569136 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
CAPN3-219ENST00000569136 NEFMP07197 916 aa12.22□□□□□ -0.45
CAPN3-219ENST00000569136 MDM2Q00987 491 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-219ENST00000569136 MTHFSDQ2M296 383 aaKnown RBP12.22□□□□□ -0.45
CAPN3-219ENST00000569136 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
CAPN3-219ENST00000569136 PHOX2BQ99453 314 aa12.22□□□□□ -0.45
CAPN3-219ENST00000569136 RGPD1P0DJD0 1748 aa12.22□□□□□ -0.45
CAPN3-219ENST00000569136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
CAPN3-219ENST00000569136 RNF40O75150 1001 aa12.21□□□□□ -0.45
CAPN3-219ENST00000569136 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
CAPN3-219ENST00000569136 SPON1Q9HCB6 807 aa12.21□□□□□ -0.45
CAPN3-219ENST00000569136 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
CAPN3-219ENST00000569136 SIK1P57059 783 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 ZFRQ96KR1 1074 aaKnown RBP12.2□□□□□ -0.46
CAPN3-219ENST00000569136 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 ASAP1Q9ULH1 1129 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
CAPN3-219ENST00000569136 PRKAR2BP31323 418 aa12.19□□□□□ -0.46
CAPN3-219ENST00000569136 PDE4DQ08499 809 aa12.19□□□□□ -0.46
CAPN3-219ENST00000569136 RSPH6AQ9H0K4 717 aa12.19□□□□□ -0.46
CAPN3-219ENST00000569136 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
CAPN3-219ENST00000569136 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
CAPN3-219ENST00000569136 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
CAPN3-219ENST00000569136 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
CAPN3-219ENST00000569136 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
CAPN3-219ENST00000569136 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms