RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 TSPYL4Q9UJ04 414 aa23.95■■□□□ 1.42
SYNGR3-205ENST00000568896 SBF1O95248 1867 aa23.95■■□□□ 1.42
SYNGR3-205ENST00000568896 NFKBIEO00221 500 aa23.94■■□□□ 1.42
SYNGR3-205ENST00000568896 SNRPA1P09661 255 aaKnown RBP23.94■■□□□ 1.42
SYNGR3-205ENST00000568896 EIF4A1P60842 406 aaKnown RBP23.94■■□□□ 1.42
SYNGR3-205ENST00000568896 ZNF622Q969S3 477 aaKnown RBP eCLIP23.94■■□□□ 1.42
SYNGR3-205ENST00000568896 ZNF219Q9P2Y4 722 aaPredicted RBP23.94■■□□□ 1.42
SYNGR3-205ENST00000568896 IL6STP40189 918 aaPredicted RBP23.93■■□□□ 1.42
SYNGR3-205ENST00000568896 PRR5LQ6MZQ0 368 aa23.93■■□□□ 1.42
SYNGR3-205ENST00000568896 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
SYNGR3-205ENST00000568896 BABAM1Q9NWV8 329 aa23.93■■□□□ 1.42
SYNGR3-205ENST00000568896 GLTPD2A6NH11 291 aa23.92■■□□□ 1.42
SYNGR3-205ENST00000568896 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
SYNGR3-205ENST00000568896 KLRG1Q96E93 195 aa23.92■■□□□ 1.42
SYNGR3-205ENST00000568896 BRIP1Q9BX63 1249 aa23.92■■□□□ 1.42
SYNGR3-205ENST00000568896 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
SYNGR3-205ENST00000568896 ZC3H4Q9UPT8 1303 aaKnown RBP23.91■■□□□ 1.42
SYNGR3-205ENST00000568896 CHL1O00533 1208 aa23.9■■□□□ 1.42
SYNGR3-205ENST00000568896 C21orf2O43822 256 aa23.9■■□□□ 1.42
SYNGR3-205ENST00000568896 CAMTA2O94983 1202 aa23.9■■□□□ 1.42
SYNGR3-205ENST00000568896 PIP4K2AP48426 406 aaPredicted RBP23.9■■□□□ 1.42
SYNGR3-205ENST00000568896 SMC1BQ8NDV3 1235 aa23.9■■□□□ 1.42
SYNGR3-205ENST00000568896 LAMB4A4D0S4 1761 aa23.9■■□□□ 1.42
SYNGR3-205ENST00000568896 PDE6BP35913 854 aa23.89■■□□□ 1.41
SYNGR3-205ENST00000568896 LAS1LQ9Y4W2 734 aaKnown RBP23.89■■□□□ 1.41
SYNGR3-205ENST00000568896 WDR90Q96KV7 1748 aa23.89■■□□□ 1.41
SYNGR3-205ENST00000568896 CCER2I3L3R5 266 aa23.88■■□□□ 1.41
SYNGR3-205ENST00000568896 VEGFAP15692 232 aaPredicted RBP23.88■■□□□ 1.41
SYNGR3-205ENST00000568896 SETDB2Q96T68 719 aa23.88■■□□□ 1.41
SYNGR3-205ENST00000568896 DLEC1Q9Y238 1755 aa23.88■■□□□ 1.41
SYNGR3-205ENST00000568896 CFAP44Q96MT7 982 aa23.87■■□□□ 1.41
SYNGR3-205ENST00000568896 POTECB2RU33 542 aa23.86■■□□□ 1.41
SYNGR3-205ENST00000568896 CALD1Q05682 793 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-205ENST00000568896 CCDC27Q2M243 656 aa23.86■■□□□ 1.41
SYNGR3-205ENST00000568896 NPM2Q86SE8 214 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-205ENST00000568896 DZIP3Q86Y13 1208 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-205ENST00000568896 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
SYNGR3-205ENST00000568896 NCBP3Q53F19 620 aaKnown RBP23.85■■□□□ 1.41
SYNGR3-205ENST00000568896 JMYQ8N9B5 988 aa23.85■■□□□ 1.41
SYNGR3-205ENST00000568896 CNBD1Q8NA66 436 aa23.85■■□□□ 1.41
SYNGR3-205ENST00000568896 PDZRN3Q9UPQ7 1066 aa23.85■■□□□ 1.41
SYNGR3-205ENST00000568896 ANKRD31Q8N7Z5 1873 aa23.85■■□□□ 1.41
SYNGR3-205ENST00000568896 ZNF853P0CG23 659 aa23.84■■□□□ 1.41
SYNGR3-205ENST00000568896 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
SYNGR3-205ENST00000568896 SCN7AQ01118 1682 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 NBPF26B4DH59 902 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 NPHP1O15259 732 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 ERFEQ4G0M1 354 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 NBPF10Q6P3W6 841 aaKnown RBP23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 WWC1Q8IX03 1113 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 NBPF15Q8N660 670 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 MBIPQ9NS73 344 aa23.83■■□□□ 1.41
SYNGR3-205ENST00000568896 GNAI1P63096 354 aa23.82■■□□□ 1.4
SYNGR3-205ENST00000568896 SRGNP10124 158 aa23.81■■□□□ 1.4
SYNGR3-205ENST00000568896 ST5P78524 1137 aa23.81■■□□□ 1.4
SYNGR3-205ENST00000568896 KRT24Q2M2I5 525 aa23.81■■□□□ 1.4
SYNGR3-205ENST00000568896 CNKSR1Q969H4 720 aa23.81■■□□□ 1.4
SYNGR3-205ENST00000568896 PCNTO95613 3336 aa23.81■■□□□ 1.4
SYNGR3-205ENST00000568896 COL11A2P13942 1736 aaPredicted RBP23.8■■□□□ 1.4
SYNGR3-205ENST00000568896 STYK1Q6J9G0 422 aa23.8■■□□□ 1.4
SYNGR3-205ENST00000568896 DPY19L2Q6NUT2 758 aa23.8■■□□□ 1.4
SYNGR3-205ENST00000568896 MIER1Q8N108 512 aa23.8■■□□□ 1.4
SYNGR3-205ENST00000568896 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
SYNGR3-205ENST00000568896 PRPF40BQ6NWY9 871 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-205ENST00000568896 MASTLQ96GX5 879 aa23.79■■□□□ 1.4
SYNGR3-205ENST00000568896 TAOK3Q9H2K8 898 aa23.79■■□□□ 1.4
SYNGR3-205ENST00000568896 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
SYNGR3-205ENST00000568896 COL13A1Q5TAT6 717 aaPredicted RBP23.78■■□□□ 1.4
SYNGR3-205ENST00000568896 NBPF5PQ86XG9 351 aaPredicted RBP23.78■■□□□ 1.4
SYNGR3-205ENST00000568896 TIAM2Q8IVF5 1701 aa23.78■■□□□ 1.4
SYNGR3-205ENST00000568896 ERBB4Q15303 1308 aa23.77■■□□□ 1.4
SYNGR3-205ENST00000568896 DDNO94850 711 aaPredicted RBP23.76■■□□□ 1.39
SYNGR3-205ENST00000568896 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
SYNGR3-205ENST00000568896 CLEC4GQ6UXB4 293 aa23.76■■□□□ 1.39
SYNGR3-205ENST00000568896 IL16Q14005 1332 aa23.76■■□□□ 1.39
SYNGR3-205ENST00000568896 LTBP3Q9NS15 1303 aa23.76■■□□□ 1.39
SYNGR3-205ENST00000568896 FAM177BA6PVY3 158 aa23.75■■□□□ 1.39
SYNGR3-205ENST00000568896 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
SYNGR3-205ENST00000568896 C7orf43Q8WVR3 580 aa23.75■■□□□ 1.39
SYNGR3-205ENST00000568896 BCORQ6W2J9 1755 aa23.75■■□□□ 1.39
SYNGR3-205ENST00000568896 SLX4Q8IY92 1834 aa23.75■■□□□ 1.39
SYNGR3-205ENST00000568896 HOXB7P09629 217 aa23.74■■□□□ 1.39
SYNGR3-205ENST00000568896 NIP7Q9Y221 180 aaKnown RBP eCLIP23.74■■□□□ 1.39
SYNGR3-205ENST00000568896 FER1L6Q2WGJ9 1857 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 POTEIP0CG38 1075 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 POTEJP0CG39 1038 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 MYL6BP14649 208 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 HLFQ16534 295 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 WDR63Q8IWG1 891 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 NECTIN2Q92692 538 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 ZNF652Q9Y2D9 606 aa23.73■■□□□ 1.39
SYNGR3-205ENST00000568896 PDIA6Q15084 440 aa23.72■■□□□ 1.39
SYNGR3-205ENST00000568896 OLFM4Q6UX06 510 aa23.72■■□□□ 1.39
SYNGR3-205ENST00000568896 KLRG2A4D1S0 409 aaPredicted RBP23.71■■□□□ 1.39
SYNGR3-205ENST00000568896 NPR1P16066 1061 aa23.71■■□□□ 1.39
SYNGR3-205ENST00000568896 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
SYNGR3-205ENST00000568896 TPTE2Q6XPS3 522 aa23.71■■□□□ 1.39
SYNGR3-205ENST00000568896 LRP10Q7Z4F1 713 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms