RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 G2E3Q7L622 706 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 PLBD2Q8NHP8 589 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 API5Q9BZZ5 524 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
HERPUD1-216ENST00000568814 PNPLA7Q6ZV29 1317 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
HERPUD1-216ENST00000568814 ZPR1O75312 459 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 MS4A1P11836 297 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 KSR2Q6VAB6 950 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 ANKRD13DQ6ZTN6 518 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
HERPUD1-216ENST00000568814 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
HERPUD1-216ENST00000568814 ARXQ96QS3 562 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 NARFQ9UHQ1 456 aa13□□□□□ -0.33
HERPUD1-216ENST00000568814 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
HERPUD1-216ENST00000568814 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 CLEC4GQ6UXB4 293 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
HERPUD1-216ENST00000568814 ADCY9O60503 1353 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
HERPUD1-216ENST00000568814 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
HERPUD1-216ENST00000568814 MSH5O43196 834 aa12.97□□□□□ -0.33
HERPUD1-216ENST00000568814 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
HERPUD1-216ENST00000568814 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-216ENST00000568814 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
HERPUD1-216ENST00000568814 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
HERPUD1-216ENST00000568814 ABCC4O15439 1325 aa12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 TRIM27P14373 513 aa12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 METTL22Q9BUU2 404 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 NUP98P52948 1817 aa12.96□□□□□ -0.33
HERPUD1-216ENST00000568814 ANKRD36CQ5JPF3 1778 aa12.96□□□□□ -0.34
HERPUD1-216ENST00000568814 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.34
HERPUD1-216ENST00000568814 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
HERPUD1-216ENST00000568814 TCIRG1Q13488 830 aa12.95□□□□□ -0.34
HERPUD1-216ENST00000568814 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
HERPUD1-216ENST00000568814 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-216ENST00000568814 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
HERPUD1-216ENST00000568814 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 F6X3S4 739 aa12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 GYS1P13807 737 aa12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-216ENST00000568814 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 HLFQ16534 295 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 SLC4A10Q6U841 1118 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 MYD88Q99836 296 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 SUPT16HQ9Y5B9 1047 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
HERPUD1-216ENST00000568814 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 PLIN1O60240 522 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 C1QTNF8P60827 252 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 ISCA1Q9BUE6 129 aa12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 NIP7Q9Y221 180 aaKnown RBP eCLIP12.92□□□□□ -0.34
HERPUD1-216ENST00000568814 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
HERPUD1-216ENST00000568814 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-216ENST00000568814 FKBP8Q14318 412 aa12.91□□□□□ -0.34
HERPUD1-216ENST00000568814 MTFR1LQ9H019 292 aa12.91□□□□□ -0.34
HERPUD1-216ENST00000568814 CWC25Q9NXE8 425 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-216ENST00000568814 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 GPTP24298 496 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 NFIXQ14938 502 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
HERPUD1-216ENST00000568814 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms