RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 BCL2L13Q9BXK5 485 aa12.99□□□□□ -0.33
PKM-221ENST00000568743 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
PKM-221ENST00000568743 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
PKM-221ENST00000568743 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
PKM-221ENST00000568743 SPON1Q9HCB6 807 aa12.98□□□□□ -0.33
PKM-221ENST00000568743 MMP10P09238 476 aa12.97□□□□□ -0.33
PKM-221ENST00000568743 PTGER2P43116 358 aa12.97□□□□□ -0.33
PKM-221ENST00000568743 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
PKM-221ENST00000568743 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
PKM-221ENST00000568743 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
PKM-221ENST00000568743 SCN7AQ01118 1682 aa12.96□□□□□ -0.33
PKM-221ENST00000568743 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
PKM-221ENST00000568743 POLD1P28340 1107 aa12.96□□□□□ -0.33
PKM-221ENST00000568743 FLIIQ13045 1269 aa12.96□□□□□ -0.33
PKM-221ENST00000568743 NFIXQ14938 502 aa12.96□□□□□ -0.33
PKM-221ENST00000568743 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
PKM-221ENST00000568743 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
PKM-221ENST00000568743 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
PKM-221ENST00000568743 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 GPTP24298 496 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
PKM-221ENST00000568743 DDR1Q08345 913 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
PKM-221ENST00000568743 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
PKM-221ENST00000568743 FAM177BA6PVY3 158 aa12.94□□□□□ -0.34
PKM-221ENST00000568743 TM4SF1P30408 202 aa12.94□□□□□ -0.34
PKM-221ENST00000568743 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
PKM-221ENST00000568743 ALDH1L2Q3SY69 923 aa12.94□□□□□ -0.34
PKM-221ENST00000568743 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
PKM-221ENST00000568743 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
PKM-221ENST00000568743 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
PKM-221ENST00000568743 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
PKM-221ENST00000568743 BCAR3O75815 825 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
PKM-221ENST00000568743 CLEC4GQ6UXB4 293 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 ADCY9O60503 1353 aa12.93□□□□□ -0.34
PKM-221ENST00000568743 SRCAPQ6ZRS2 3230 aa12.92□□□□□ -0.34
PKM-221ENST00000568743 F6X3S4 739 aa12.92□□□□□ -0.34
PKM-221ENST00000568743 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
PKM-221ENST00000568743 KSR2Q6VAB6 950 aa12.92□□□□□ -0.34
PKM-221ENST00000568743 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
PKM-221ENST00000568743 MYD88Q99836 296 aa12.92□□□□□ -0.34
PKM-221ENST00000568743 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 SERPINB2P05120 415 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 PPP1R1BQ9UD71 204 aaPredicted RBP12.91□□□□□ -0.34
PKM-221ENST00000568743 CARMIL3Q8ND23 1372 aa12.91□□□□□ -0.34
PKM-221ENST00000568743 RGL2O15211 777 aa12.9□□□□□ -0.34
PKM-221ENST00000568743 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
PKM-221ENST00000568743 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
PKM-221ENST00000568743 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
PKM-221ENST00000568743 COL24A1Q17RW2 1714 aa12.9□□□□□ -0.34
PKM-221ENST00000568743 NPHP1O15259 732 aa12.89□□□□□ -0.35
PKM-221ENST00000568743 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
PKM-221ENST00000568743 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
PKM-221ENST00000568743 SLC4A10Q6U841 1118 aa12.89□□□□□ -0.35
PKM-221ENST00000568743 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
PKM-221ENST00000568743 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
PKM-221ENST00000568743 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
PKM-221ENST00000568743 ARFGEF2Q9Y6D5 1785 aa12.89□□□□□ -0.35
PKM-221ENST00000568743 PTPRCP08575 1304 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 LRP5O75197 1615 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 NUP98P52948 1817 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
PKM-221ENST00000568743 PRR5LQ6MZQ0 368 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
PKM-221ENST00000568743 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
PKM-221ENST00000568743 NTSR2O95665 410 aa12.87□□□□□ -0.35
PKM-221ENST00000568743 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
PKM-221ENST00000568743 NEXNQ0ZGT2 675 aa12.87□□□□□ -0.35
PKM-221ENST00000568743 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
PKM-221ENST00000568743 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
PKM-221ENST00000568743 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
PKM-221ENST00000568743 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
PKM-221ENST00000568743 GTF2E1P29083 439 aaPredicted RBP12.86□□□□□ -0.35
PKM-221ENST00000568743 ERFEQ4G0M1 354 aa12.86□□□□□ -0.35
PKM-221ENST00000568743 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
PKM-221ENST00000568743 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
PKM-221ENST00000568743 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
PKM-221ENST00000568743 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
PKM-221ENST00000568743 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
PKM-221ENST00000568743 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
PKM-221ENST00000568743 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
PKM-221ENST00000568743 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
PKM-221ENST00000568743 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
PKM-221ENST00000568743 NEURL1BA8MQ27 555 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms