RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
FANCA-231ENST00000568626 ARHGEF1Q92888 912 aaKnown RBP15.31■□□□□ 0.04
FANCA-231ENST00000568626 MAP3K15Q6ZN16 1313 aa15.31■□□□□ 0.04
FANCA-231ENST00000568626 PXDNLA1KZ92 1463 aa15.31■□□□□ 0.04
FANCA-231ENST00000568626 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
FANCA-231ENST00000568626 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
FANCA-231ENST00000568626 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
FANCA-231ENST00000568626 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
FANCA-231ENST00000568626 PLBD2Q8NHP8 589 aa15.3■□□□□ 0.04
FANCA-231ENST00000568626 ARHGAP45Q92619 1136 aa15.3■□□□□ 0.04
FANCA-231ENST00000568626 PHAXQ9H814 394 aaKnown RBP15.3■□□□□ 0.04
FANCA-231ENST00000568626 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
FANCA-231ENST00000568626 ATP10DQ9P241 1426 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 TTLL7Q6ZT98 887 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 G2E3Q7L622 706 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
FANCA-231ENST00000568626 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.29■□□□□ 0.04
FANCA-231ENST00000568626 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 ARXQ96QS3 562 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 API5Q9BZZ5 524 aaKnown RBP15.29■□□□□ 0.04
FANCA-231ENST00000568626 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
FANCA-231ENST00000568626 MSH5O43196 834 aa15.28■□□□□ 0.04
FANCA-231ENST00000568626 BCAR3O75815 825 aa15.28■□□□□ 0.04
FANCA-231ENST00000568626 KSR2Q6VAB6 950 aa15.28■□□□□ 0.04
FANCA-231ENST00000568626 RIC3Q7Z5B4 369 aa15.28■□□□□ 0.04
FANCA-231ENST00000568626 NUP98P52948 1817 aa15.28■□□□□ 0.04
FANCA-231ENST00000568626 ADCY9O60503 1353 aa15.27■□□□□ 0.04
FANCA-231ENST00000568626 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
FANCA-231ENST00000568626 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
FANCA-231ENST00000568626 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
FANCA-231ENST00000568626 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
FANCA-231ENST00000568626 PI4KAP2A4QPH2 592 aa15.26■□□□□ 0.03
FANCA-231ENST00000568626 MS4A1P11836 297 aa15.26■□□□□ 0.03
FANCA-231ENST00000568626 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
FANCA-231ENST00000568626 GIGYF2Q6Y7W6 1299 aaKnown RBP15.26■□□□□ 0.03
FANCA-231ENST00000568626 PI4KAP1Q8N8J0 262 aa15.26■□□□□ 0.03
FANCA-231ENST00000568626 SRP68Q9UHB9 627 aaKnown RBP15.26■□□□□ 0.03
FANCA-231ENST00000568626 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
FANCA-231ENST00000568626 GYS1P13807 737 aa15.25■□□□□ 0.03
FANCA-231ENST00000568626 NEXNQ0ZGT2 675 aa15.25■□□□□ 0.03
FANCA-231ENST00000568626 SMIM5Q71RC9 77 aa15.25■□□□□ 0.03
FANCA-231ENST00000568626 NLGN1Q8N2Q7 840 aa15.25■□□□□ 0.03
FANCA-231ENST00000568626 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
FANCA-231ENST00000568626 FRAT1Q92837 279 aaPredicted RBP15.25■□□□□ 0.03
FANCA-231ENST00000568626 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
FANCA-231ENST00000568626 IBTKQ9P2D0 1353 aaPredicted RBP15.24■□□□□ 0.03
FANCA-231ENST00000568626 METTL22Q9BUU2 404 aaPredicted RBP15.24■□□□□ 0.03
FANCA-231ENST00000568626 BCL2L12Q9HB09 334 aa15.24■□□□□ 0.03
FANCA-231ENST00000568626 ABCC4O15439 1325 aa15.23■□□□□ 0.03
FANCA-231ENST00000568626 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
FANCA-231ENST00000568626 TRIM27P14373 513 aa15.23■□□□□ 0.03
FANCA-231ENST00000568626 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
FANCA-231ENST00000568626 MTFR1LQ9H019 292 aa15.23■□□□□ 0.03
FANCA-231ENST00000568626 CARMIL3Q8ND23 1372 aa15.23■□□□□ 0.03
FANCA-231ENST00000568626 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
FANCA-231ENST00000568626 TRIM28Q13263 835 aaKnown RBP15.22■□□□□ 0.03
FANCA-231ENST00000568626 FKBP8Q14318 412 aa15.22■□□□□ 0.03
FANCA-231ENST00000568626 HLFQ16534 295 aa15.22■□□□□ 0.03
FANCA-231ENST00000568626 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
FANCA-231ENST00000568626 FTSJ3Q8IY81 847 aaKnown RBP15.22■□□□□ 0.03
FANCA-231ENST00000568626 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
FANCA-231ENST00000568626 F6X3S4 739 aa15.21■□□□□ 0.03
FANCA-231ENST00000568626 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
FANCA-231ENST00000568626 ZNF34Q8IZ26 560 aa15.21■□□□□ 0.03
FANCA-231ENST00000568626 SETDB2Q96T68 719 aa15.21■□□□□ 0.03
FANCA-231ENST00000568626 MYD88Q99836 296 aa15.21■□□□□ 0.03
FANCA-231ENST00000568626 ISCA1Q9BUE6 129 aa15.21■□□□□ 0.03
FANCA-231ENST00000568626 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.03
FANCA-231ENST00000568626 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 ALDH1L1O75891 902 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 TBC1D9BQ66K14 1250 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 SLC4A10Q6U841 1118 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 DZIP1LQ8IYY4 767 aaKnown RBP15.2■□□□□ 0.02
FANCA-231ENST00000568626 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
FANCA-231ENST00000568626 PDGFDQ9GZP0 370 aaPredicted RBP15.2■□□□□ 0.02
FANCA-231ENST00000568626 NFIXQ14938 502 aa15.19■□□□□ 0.02
FANCA-231ENST00000568626 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
FANCA-231ENST00000568626 NYXQ9GZU5 481 aa15.19■□□□□ 0.02
FANCA-231ENST00000568626 SPON1Q9HCB6 807 aa15.19■□□□□ 0.02
FANCA-231ENST00000568626 CWC25Q9NXE8 425 aaPredicted RBP15.19■□□□□ 0.02
FANCA-231ENST00000568626 PPP1R1BQ9UD71 204 aaPredicted RBP15.19■□□□□ 0.02
FANCA-231ENST00000568626 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
FANCA-231ENST00000568626 UBN2Q6ZU65 1347 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 NEURL1BA8MQ27 555 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 GPTP24298 496 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 POLD1P28340 1107 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 TM4SF1P30408 202 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
FANCA-231ENST00000568626 PPP1R42Q7Z4L9 355 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 NLRP10Q86W26 655 aa15.18■□□□□ 0.02
FANCA-231ENST00000568626 LAMB2P55268 1798 aa15.17■□□□□ 0.02
FANCA-231ENST00000568626 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
FANCA-231ENST00000568626 ZBTB7AO95365 584 aa15.17■□□□□ 0.02
FANCA-231ENST00000568626 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms