RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 NUDCQ9Y266 331 aa20.76■□□□□ 0.91
NME3-211ENST00000568561 DLG5Q8TDM6 1919 aa20.76■□□□□ 0.91
NME3-211ENST00000568561 KLRG1Q96E93 195 aa20.75■□□□□ 0.91
NME3-211ENST00000568561 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
NME3-211ENST00000568561 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
NME3-211ENST00000568561 VEGFAP15692 232 aaPredicted RBP20.73■□□□□ 0.91
NME3-211ENST00000568561 ST5P78524 1137 aa20.73■□□□□ 0.91
NME3-211ENST00000568561 PDZRN3Q9UPQ7 1066 aa20.72■□□□□ 0.91
NME3-211ENST00000568561 PCNTO95613 3336 aa20.71■□□□□ 0.91
NME3-211ENST00000568561 POTECB2RU33 542 aa20.71■□□□□ 0.91
NME3-211ENST00000568561 SNRPA1P09661 255 aaKnown RBP20.71■□□□□ 0.91
NME3-211ENST00000568561 ERFEQ4G0M1 354 aa20.71■□□□□ 0.91
NME3-211ENST00000568561 PRPF40BQ6NWY9 871 aaKnown RBP20.71■□□□□ 0.91
NME3-211ENST00000568561 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
NME3-211ENST00000568561 NBPF26B4DH59 902 aa20.7■□□□□ 0.9
NME3-211ENST00000568561 SRGNP10124 158 aa20.7■□□□□ 0.9
NME3-211ENST00000568561 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.9
NME3-211ENST00000568561 NBPF5PQ86XG9 351 aaPredicted RBP20.7■□□□□ 0.9
NME3-211ENST00000568561 NBPF15Q8N660 670 aa20.7■□□□□ 0.9
NME3-211ENST00000568561 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
NME3-211ENST00000568561 STYK1Q6J9G0 422 aa20.69■□□□□ 0.9
NME3-211ENST00000568561 CNKSR1Q969H4 720 aa20.69■□□□□ 0.9
NME3-211ENST00000568561 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
NME3-211ENST00000568561 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
NME3-211ENST00000568561 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
NME3-211ENST00000568561 MASTLQ96GX5 879 aa20.68■□□□□ 0.9
NME3-211ENST00000568561 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
NME3-211ENST00000568561 ZNF652Q9Y2D9 606 aa20.67■□□□□ 0.9
NME3-211ENST00000568561 LTBP3Q9NS15 1303 aa20.67■□□□□ 0.9
NME3-211ENST00000568561 NIP7Q9Y221 180 aaKnown RBP eCLIP20.66■□□□□ 0.9
NME3-211ENST00000568561 NUP98P52948 1817 aa20.65■□□□□ 0.9
NME3-211ENST00000568561 OLFM4Q6UX06 510 aa20.65■□□□□ 0.9
NME3-211ENST00000568561 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
NME3-211ENST00000568561 DDNO94850 711 aaPredicted RBP20.64■□□□□ 0.89
NME3-211ENST00000568561 POTEIP0CG38 1075 aa20.64■□□□□ 0.89
NME3-211ENST00000568561 POTEJP0CG39 1038 aa20.64■□□□□ 0.89
NME3-211ENST00000568561 HLFQ16534 295 aa20.64■□□□□ 0.89
NME3-211ENST00000568561 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
NME3-211ENST00000568561 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
NME3-211ENST00000568561 NGEFQ8N5V2 710 aa20.63■□□□□ 0.89
NME3-211ENST00000568561 NPR1P16066 1061 aa20.62■□□□□ 0.89
NME3-211ENST00000568561 COL13A1Q5TAT6 717 aaPredicted RBP20.62■□□□□ 0.89
NME3-211ENST00000568561 SOGA3Q5TF21 947 aa20.62■□□□□ 0.89
NME3-211ENST00000568561 C7orf43Q8WVR3 580 aa20.62■□□□□ 0.89
NME3-211ENST00000568561 THUMPD2Q9BTF0 503 aaKnown RBP20.62■□□□□ 0.89
NME3-211ENST00000568561 CCDC93Q567U6 631 aa20.61■□□□□ 0.89
NME3-211ENST00000568561 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
NME3-211ENST00000568561 ABCC12Q96J65 1359 aa20.6■□□□□ 0.89
NME3-211ENST00000568561 SCN4AP35499 1836 aa20.6■□□□□ 0.89
NME3-211ENST00000568561 KLRG2A4D1S0 409 aaPredicted RBP20.59■□□□□ 0.89
NME3-211ENST00000568561 ZNF277Q9NRM2 450 aaPredicted RBP20.59■□□□□ 0.89
NME3-211ENST00000568561 ZNF541Q9H0D2 1346 aa20.58■□□□□ 0.89
NME3-211ENST00000568561 CHADLQ6NUI6 762 aa20.58■□□□□ 0.89
NME3-211ENST00000568561 NUTM1Q86Y26 1132 aa20.58■□□□□ 0.89
NME3-211ENST00000568561 RRP7AQ9Y3A4 280 aaKnown RBP20.58■□□□□ 0.89
NME3-211ENST00000568561 NEFMP07197 916 aa20.57■□□□□ 0.88
NME3-211ENST00000568561 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
NME3-211ENST00000568561 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
NME3-211ENST00000568561 TTLL7Q6ZT98 887 aa20.57■□□□□ 0.88
NME3-211ENST00000568561 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
NME3-211ENST00000568561 RGL2O15211 777 aa20.56■□□□□ 0.88
NME3-211ENST00000568561 MYL6BP14649 208 aa20.56■□□□□ 0.88
NME3-211ENST00000568561 NFE2L2Q16236 605 aa20.56■□□□□ 0.88
NME3-211ENST00000568561 HSPA1AP0DMV8 641 aaKnown RBP20.55■□□□□ 0.88
NME3-211ENST00000568561 HSPA1BP0DMV9 641 aaKnown RBP20.55■□□□□ 0.88
NME3-211ENST00000568561 GPTP24298 496 aa20.55■□□□□ 0.88
NME3-211ENST00000568561 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
NME3-211ENST00000568561 ZBTB3Q9H5J0 574 aa20.55■□□□□ 0.88
NME3-211ENST00000568561 MAP3K15Q6ZN16 1313 aa20.54■□□□□ 0.88
NME3-211ENST00000568561 SLC51AQ86UW1 340 aa20.54■□□□□ 0.88
NME3-211ENST00000568561 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
NME3-211ENST00000568561 MKRN1Q9UHC7 482 aaKnown RBP20.54■□□□□ 0.88
NME3-211ENST00000568561 UBN2Q6ZU65 1347 aa20.53■□□□□ 0.88
NME3-211ENST00000568561 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
NME3-211ENST00000568561 SNED1Q8TER0 1413 aa20.53■□□□□ 0.88
NME3-211ENST00000568561 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
NME3-211ENST00000568561 L3MBTL3Q96JM7 780 aaPredicted RBP20.53■□□□□ 0.88
NME3-211ENST00000568561 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
NME3-211ENST00000568561 COL4A5P29400 1685 aa20.53■□□□□ 0.88
NME3-211ENST00000568561 ADAMTSL1Q8N6G6 1762 aa20.52■□□□□ 0.88
NME3-211ENST00000568561 IQCA1LA6NCM1 817 aa20.52■□□□□ 0.88
NME3-211ENST00000568561 CAPN15O75808 1086 aa20.52■□□□□ 0.88
NME3-211ENST00000568561 RTKN2Q8IZC4 609 aa20.52■□□□□ 0.88
NME3-211ENST00000568561 ERVV-1B6SEH8 477 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 IARSP41252 1262 aaKnown RBP20.51■□□□□ 0.87
NME3-211ENST00000568561 CRY2Q49AN0 593 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 EAPPQ56P03 285 aaPredicted RBP20.51■□□□□ 0.87
NME3-211ENST00000568561 SYNE4Q8N205 404 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 NYXQ9GZU5 481 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 CREBZFQ9NS37 354 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
NME3-211ENST00000568561 LDHDQ86WU2 507 aa20.5■□□□□ 0.87
NME3-211ENST00000568561 TNS4Q8IZW8 715 aa20.5■□□□□ 0.87
NME3-211ENST00000568561 SUSD4Q5VX71 490 aa20.49■□□□□ 0.87
NME3-211ENST00000568561 PASKQ96RG2 1323 aa20.49■□□□□ 0.87
NME3-211ENST00000568561 RIC1Q4ADV7 1423 aa20.48■□□□□ 0.87
NME3-211ENST00000568561 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
NME3-211ENST00000568561 C3orf67Q6ZVT6 689 aa20.48■□□□□ 0.87
NME3-211ENST00000568561 RPGRQ92834 1020 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms