RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 AMIGO3Q86WK7 504 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
SCAPER-221ENST00000568549 FRAT1Q92837 279 aaPredicted RBP9.8□□□□□ -0.84
SCAPER-221ENST00000568549 ARXQ96QS3 562 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 NOB1Q9ULX3 412 aaKnown RBP9.8□□□□□ -0.84
SCAPER-221ENST00000568549 PTPRCP08575 1304 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
SCAPER-221ENST00000568549 IPO8O15397 1037 aaKnown RBP9.79□□□□□ -0.84
SCAPER-221ENST00000568549 DDX58O95786 925 aaKnown RBP9.79□□□□□ -0.84
SCAPER-221ENST00000568549 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
SCAPER-221ENST00000568549 TTLL7Q6ZT98 887 aa9.79□□□□□ -0.84
SCAPER-221ENST00000568549 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.79□□□□□ -0.84
SCAPER-221ENST00000568549 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
SCAPER-221ENST00000568549 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
SCAPER-221ENST00000568549 RFC4P35249 363 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 ZKSCAN2Q63HK3 967 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 PLBD2Q8NHP8 589 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 ZBTB3Q9H5J0 574 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 TBC1D2BQ9UPU7 963 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 MAP3K15Q6ZN16 1313 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 PNPLA7Q6ZV29 1317 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
SCAPER-221ENST00000568549 ADCY9O60503 1353 aa9.77□□□□□ -0.84
SCAPER-221ENST00000568549 PI4KAP2A4QPH2 592 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 ZPR1O75312 459 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 RRP1P56182 461 aaKnown RBP9.77□□□□□ -0.85
SCAPER-221ENST00000568549 KSR2Q6VAB6 950 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 ATF7IPQ6VMQ6 1270 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 ANKRD13DQ6ZTN6 518 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 PI4KAP1Q8N8J0 262 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
SCAPER-221ENST00000568549 NARFQ9UHQ1 456 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
SCAPER-221ENST00000568549 PXDNLA1KZ92 1463 aa9.77□□□□□ -0.85
SCAPER-221ENST00000568549 USP42Q9H9J4 1324 aaKnown RBP9.77□□□□□ -0.85
SCAPER-221ENST00000568549 ERVV-1B6SEH8 477 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 F6X3S4 739 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 SOCS7O14512 581 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 PLIN1O60240 522 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 CAMTA2O94983 1202 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 TRIM27P14373 513 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 USPL1Q5W0Q7 1092 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 COL23A1Q86Y22 540 aaPredicted RBP9.76□□□□□ -0.85
SCAPER-221ENST00000568549 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 SRP68Q9UHB9 627 aaKnown RBP9.76□□□□□ -0.85
SCAPER-221ENST00000568549 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 MAP3K2Q9Y2U5 619 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 COL24A1Q17RW2 1714 aa9.76□□□□□ -0.85
SCAPER-221ENST00000568549 RGL2O15211 777 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 MS4A1P11836 297 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 HLFQ16534 295 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 HSP90AB3PQ58FF7 597 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 SLC4A10Q6U841 1118 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
SCAPER-221ENST00000568549 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
SCAPER-221ENST00000568549 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 RNF123Q5XPI4 1314 aa9.75□□□□□ -0.85
SCAPER-221ENST00000568549 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 GYS1P13807 737 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 NEXNQ0ZGT2 675 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 R3HDM1Q15032 1099 aaKnown RBP9.74□□□□□ -0.85
SCAPER-221ENST00000568549 CLEC4GQ6UXB4 293 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
SCAPER-221ENST00000568549 CLUAP1Q96AJ1 413 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 MYD88Q99836 296 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 METTL22Q9BUU2 404 aaPredicted RBP9.74□□□□□ -0.85
SCAPER-221ENST00000568549 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 ABCC4O15439 1325 aa9.74□□□□□ -0.85
SCAPER-221ENST00000568549 TCIRG1Q13488 830 aa9.73□□□□□ -0.85
SCAPER-221ENST00000568549 PSDA5PKW4 1024 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-221ENST00000568549 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 GPTP24298 496 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
SCAPER-221ENST00000568549 FKBP8Q14318 412 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 BEND3Q5T5X7 828 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 TBC1D9BQ66K14 1250 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 TMEM57Q8N5G2 664 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 SRCIN1Q9C0H9 1055 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 PDGFDQ9GZP0 370 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-221ENST00000568549 NIP7Q9Y221 180 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCAPER-221ENST00000568549 LAMB2P55268 1798 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 MYH3P11055 1940 aa9.72□□□□□ -0.85
SCAPER-221ENST00000568549 NRXN2Q9P2S2 1712 aa9.71□□□□□ -0.85
SCAPER-221ENST00000568549 NEURL1BA8MQ27 555 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 IGKV5-2P06315 115 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 RLBP1P12271 317 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 CWF19L2Q2TBE0 894 aaKnown RBP9.71□□□□□ -0.86
SCAPER-221ENST00000568549 PARP10Q53GL7 1025 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 C20orf194Q5TEA3 1177 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 MSL1Q68DK7 614 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 INTS3Q68E01 1043 aaKnown RBP9.71□□□□□ -0.86
SCAPER-221ENST00000568549 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 ITPRIPQ8IWB1 547 aa9.71□□□□□ -0.86
SCAPER-221ENST00000568549 ZNF34Q8IZ26 560 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms