RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
COX4I1-215ENST00000568339 HSP90AB4PQ58FF6 505 aa20.6■□□□□ 0.89
COX4I1-215ENST00000568339 STAP2Q9UGK3 403 aa20.6■□□□□ 0.89
COX4I1-215ENST00000568339 AOX1Q06278 1338 aa20.6■□□□□ 0.89
COX4I1-215ENST00000568339 NEURL1BA8MQ27 555 aa20.6■□□□□ 0.89
COX4I1-215ENST00000568339 TOM1O60784 492 aa20.6■□□□□ 0.89
COX4I1-215ENST00000568339 COL15A1P39059 1388 aa20.59■□□□□ 0.89
COX4I1-215ENST00000568339 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
COX4I1-215ENST00000568339 CDCA7Q9BWT1 371 aaPredicted RBP20.58■□□□□ 0.89
COX4I1-215ENST00000568339 SURF6O75683 361 aaKnown RBP20.58■□□□□ 0.88
COX4I1-215ENST00000568339 SDSP20132 328 aa20.58■□□□□ 0.88
COX4I1-215ENST00000568339 PLBD2Q8NHP8 589 aa20.58■□□□□ 0.88
COX4I1-215ENST00000568339 SLKQ9H2G2 1235 aaPredicted RBP20.58■□□□□ 0.88
COX4I1-215ENST00000568339 FSD2A1L4K1 749 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 XRCC6P12956 609 aaKnown RBP eCLIP20.57■□□□□ 0.88
COX4I1-215ENST00000568339 GCKRQ14397 625 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 NBPF14Q5TI25 921 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
COX4I1-215ENST00000568339 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 KIF1BPQ96EK5 621 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
COX4I1-215ENST00000568339 MX1P20591 662 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 KAZALD1Q96I82 304 aa20.57■□□□□ 0.88
COX4I1-215ENST00000568339 RHPN1Q8TCX5 695 aa20.56■□□□□ 0.88
COX4I1-215ENST00000568339 SUCLG2Q96I99 432 aa20.56■□□□□ 0.88
COX4I1-215ENST00000568339 MYD88Q99836 296 aa20.56■□□□□ 0.88
COX4I1-215ENST00000568339 BCL9O00512 1426 aa20.55■□□□□ 0.88
COX4I1-215ENST00000568339 TEX13AQ9BXU3 409 aaPredicted RBP20.55■□□□□ 0.88
COX4I1-215ENST00000568339 SLIT2O94813 1529 aa20.54■□□□□ 0.88
COX4I1-215ENST00000568339 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
COX4I1-215ENST00000568339 EXOC5O00471 708 aa20.54■□□□□ 0.88
COX4I1-215ENST00000568339 PIGBQ92521 554 aa20.54■□□□□ 0.88
COX4I1-215ENST00000568339 CLCN1P35523 988 aa20.52■□□□□ 0.88
COX4I1-215ENST00000568339 PIP4K2AP48426 406 aaPredicted RBP20.52■□□□□ 0.88
COX4I1-215ENST00000568339 CASC1Q6TDU7 716 aa20.52■□□□□ 0.88
COX4I1-215ENST00000568339 ERC1Q8IUD2 1116 aa20.52■□□□□ 0.88
COX4I1-215ENST00000568339 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
COX4I1-215ENST00000568339 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.88
COX4I1-215ENST00000568339 ATG3Q9NT62 314 aa20.52■□□□□ 0.88
COX4I1-215ENST00000568339 USP42Q9H9J4 1324 aaKnown RBP20.51■□□□□ 0.87
COX4I1-215ENST00000568339 TBC1D2Q9BYX2 928 aa20.51■□□□□ 0.87
COX4I1-215ENST00000568339 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
COX4I1-215ENST00000568339 TJP1Q07157 1748 aa20.5■□□□□ 0.87
COX4I1-215ENST00000568339 A1BGP04217 495 aa20.5■□□□□ 0.87
COX4I1-215ENST00000568339 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
COX4I1-215ENST00000568339 PKNOX2Q96KN3 472 aa20.5■□□□□ 0.87
COX4I1-215ENST00000568339 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
COX4I1-215ENST00000568339 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
COX4I1-215ENST00000568339 GOLGA6L3A6NEY3 463 aa20.49■□□□□ 0.87
COX4I1-215ENST00000568339 RABL6Q3YEC7 729 aaPredicted RBP20.49■□□□□ 0.87
COX4I1-215ENST00000568339 SPATA31A5Q5VU36 1347 aa20.49■□□□□ 0.87
COX4I1-215ENST00000568339 SPATA31A7Q8IWB4 1347 aa20.49■□□□□ 0.87
COX4I1-215ENST00000568339 CASP7P55210 303 aa20.48■□□□□ 0.87
COX4I1-215ENST00000568339 KIF2CQ99661 725 aa20.48■□□□□ 0.87
COX4I1-215ENST00000568339 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.48■□□□□ 0.87
COX4I1-215ENST00000568339 BARGINQ6ZT62 677 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 TTLL7Q6ZT98 887 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 SNX21Q969T3 373 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 PANK2Q9BZ23 570 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 TTC41PQ6P2S7 1318 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 AK9Q5TCS8 1911 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 MCM4P33991 863 aa20.47■□□□□ 0.87
COX4I1-215ENST00000568339 H7C1W4 665 aa20.46■□□□□ 0.87
COX4I1-215ENST00000568339 PIP4K2BP78356 416 aa20.46■□□□□ 0.87
COX4I1-215ENST00000568339 PI4K2BQ8TCG2 481 aa20.46■□□□□ 0.87
COX4I1-215ENST00000568339 USP26Q9BXU7 913 aa20.46■□□□□ 0.87
COX4I1-215ENST00000568339 CICQ96RK0 1608 aaPredicted RBP20.46■□□□□ 0.87
COX4I1-215ENST00000568339 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
COX4I1-215ENST00000568339 NUTM1Q86Y26 1132 aa20.46■□□□□ 0.87
COX4I1-215ENST00000568339 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
COX4I1-215ENST00000568339 STARD3NLO95772 234 aa20.45■□□□□ 0.86
COX4I1-215ENST00000568339 OS9Q13438 667 aaPredicted RBP20.45■□□□□ 0.86
COX4I1-215ENST00000568339 EPHA10Q5JZY3 1008 aa20.45■□□□□ 0.86
COX4I1-215ENST00000568339 TSHZ3Q63HK5 1081 aa20.45■□□□□ 0.86
COX4I1-215ENST00000568339 REC8O95072 547 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 CCDC191Q8NCU4 936 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 NAP1L5Q96NT1 182 aaPredicted RBP20.44■□□□□ 0.86
COX4I1-215ENST00000568339 COPRSQ9NQ92 184 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 PA2G4Q9UQ80 394 aaKnown RBP20.44■□□□□ 0.86
COX4I1-215ENST00000568339 A0A087WZG4 1122 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 ATP5J2-PTCD1G3V325 749 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 ERC2O15083 957 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 DDB1Q16531 1140 aa20.44■□□□□ 0.86
COX4I1-215ENST00000568339 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
COX4I1-215ENST00000568339 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
COX4I1-215ENST00000568339 G3BP1Q13283 466 aaKnown RBP eCLIP20.43■□□□□ 0.861e-8■□□□□ 9.8
COX4I1-215ENST00000568339 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
COX4I1-215ENST00000568339 JCADQ9P266 1359 aa20.42■□□□□ 0.86
COX4I1-215ENST00000568339 SASH1O94885 1247 aa20.42■□□□□ 0.86
COX4I1-215ENST00000568339 TRIM28Q13263 835 aaKnown RBP20.42■□□□□ 0.86
COX4I1-215ENST00000568339 ISCA1Q9BUE6 129 aa20.42■□□□□ 0.86
COX4I1-215ENST00000568339 NUTM2BA6NNL0 878 aaPredicted RBP20.42■□□□□ 0.86
COX4I1-215ENST00000568339 NUTM2EB1AL46 878 aaPredicted RBP20.42■□□□□ 0.86
COX4I1-215ENST00000568339 UBAP1LF5GYI3 381 aa20.42■□□□□ 0.86
COX4I1-215ENST00000568339 NUTM2AQ8IVF1 878 aaPredicted RBP20.42■□□□□ 0.86
COX4I1-215ENST00000568339 CHMLP26374 656 aa20.41■□□□□ 0.86
COX4I1-215ENST00000568339 SLC4A9Q96Q91 983 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms