RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 CCDC93Q567U6 631 aa11.12□□□□□ -0.63
SIN3A-210ENST00000568309 PRR5LQ6MZQ0 368 aa11.12□□□□□ -0.63
SIN3A-210ENST00000568309 DNAJC10Q8IXB1 793 aa11.12□□□□□ -0.63
SIN3A-210ENST00000568309 C7orf43Q8WVR3 580 aa11.12□□□□□ -0.63
SIN3A-210ENST00000568309 SRGNP10124 158 aa11.11□□□□□ -0.63
SIN3A-210ENST00000568309 NOGQ13253 232 aa11.11□□□□□ -0.63
SIN3A-210ENST00000568309 BICDL1Q6ZP65 573 aa11.11□□□□□ -0.63
SIN3A-210ENST00000568309 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
SIN3A-210ENST00000568309 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
SIN3A-210ENST00000568309 WASHC2AQ641Q2 1341 aa11.1□□□□□ -0.63
SIN3A-210ENST00000568309 KIF20BQ96Q89 1820 aa11.1□□□□□ -0.63
SIN3A-210ENST00000568309 CYP19A1P11511 503 aaPredicted RBP11.1□□□□□ -0.63
SIN3A-210ENST00000568309 LMOD1P29536 600 aaPredicted RBP11.1□□□□□ -0.63
SIN3A-210ENST00000568309 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
SIN3A-210ENST00000568309 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
SIN3A-210ENST00000568309 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
SIN3A-210ENST00000568309 ZBTB1Q9Y2K1 713 aa11.1□□□□□ -0.63
SIN3A-210ENST00000568309 BCORQ6W2J9 1755 aa11.09□□□□□ -0.63
SIN3A-210ENST00000568309 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
SIN3A-210ENST00000568309 USP50Q70EL3 339 aaPredicted RBP11.09□□□□□ -0.63
SIN3A-210ENST00000568309 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
SIN3A-210ENST00000568309 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
SIN3A-210ENST00000568309 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
SIN3A-210ENST00000568309 IARSP41252 1262 aaKnown RBP11.08□□□□□ -0.64
SIN3A-210ENST00000568309 EPS15P42566 896 aa11.08□□□□□ -0.64
SIN3A-210ENST00000568309 SCNN1DP51172 638 aa11.08□□□□□ -0.64
SIN3A-210ENST00000568309 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
SIN3A-210ENST00000568309 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
SIN3A-210ENST00000568309 CUL9Q8IWT3 2517 aa11.07□□□□□ -0.64
SIN3A-210ENST00000568309 ST20-MTHFSA0A0A6YYL1 179 aa11.07□□□□□ -0.64
SIN3A-210ENST00000568309 PPM1GO15355 546 aaPredicted RBP11.07□□□□□ -0.64
SIN3A-210ENST00000568309 MTHFSP49914 203 aa11.07□□□□□ -0.64
SIN3A-210ENST00000568309 PLEKHO1Q53GL0 409 aaPredicted RBP11.07□□□□□ -0.64
SIN3A-210ENST00000568309 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
SIN3A-210ENST00000568309 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
SIN3A-210ENST00000568309 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
SIN3A-210ENST00000568309 SCN7AQ01118 1682 aa11.06□□□□□ -0.64
SIN3A-210ENST00000568309 EIF6P56537 245 aaKnown RBP11.06□□□□□ -0.64
SIN3A-210ENST00000568309 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
SIN3A-210ENST00000568309 CNBD1Q8NA66 436 aa11.06□□□□□ -0.64
SIN3A-210ENST00000568309 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
SIN3A-210ENST00000568309 GJA3Q9Y6H8 435 aa11.06□□□□□ -0.64
SIN3A-210ENST00000568309 A0A087WZG4 1122 aa11.05□□□□□ -0.64
SIN3A-210ENST00000568309 EIF5P55010 431 aaKnown RBP11.05□□□□□ -0.64
SIN3A-210ENST00000568309 ST5P78524 1137 aa11.05□□□□□ -0.64
SIN3A-210ENST00000568309 PKN2Q16513 984 aaKnown RBP11.05□□□□□ -0.64
SIN3A-210ENST00000568309 SYNE4Q8N205 404 aa11.05□□□□□ -0.64
SIN3A-210ENST00000568309 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
SIN3A-210ENST00000568309 FAM155AB1AL88 458 aaPredicted RBP11.04□□□□□ -0.64
SIN3A-210ENST00000568309 OLFM4Q6UX06 510 aa11.04□□□□□ -0.64
SIN3A-210ENST00000568309 TESK2Q96S53 571 aa11.04□□□□□ -0.64
SIN3A-210ENST00000568309 RNF186Q9NXI6 227 aa11.04□□□□□ -0.64
SIN3A-210ENST00000568309 COL4A5P29400 1685 aa11.04□□□□□ -0.64
SIN3A-210ENST00000568309 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
SIN3A-210ENST00000568309 TRPA1O75762 1119 aa11.03□□□□□ -0.64
SIN3A-210ENST00000568309 NPR1P16066 1061 aa11.03□□□□□ -0.64
SIN3A-210ENST00000568309 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
SIN3A-210ENST00000568309 EIF4A2Q14240 407 aaKnown RBP11.03□□□□□ -0.64
SIN3A-210ENST00000568309 PSMD1Q99460 953 aa11.03□□□□□ -0.64
SIN3A-210ENST00000568309 GLIS2Q9BZE0 524 aaPredicted RBP11.03□□□□□ -0.64
SIN3A-210ENST00000568309 PGAP2Q9UHJ9 254 aa11.03□□□□□ -0.64
SIN3A-210ENST00000568309 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
SIN3A-210ENST00000568309 NPHP1O15259 732 aa11.02□□□□□ -0.65
SIN3A-210ENST00000568309 HUNKP57058 714 aa11.02□□□□□ -0.65
SIN3A-210ENST00000568309 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.65
SIN3A-210ENST00000568309 C1orf141Q5JVX7 400 aa11.02□□□□□ -0.65
SIN3A-210ENST00000568309 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
SIN3A-210ENST00000568309 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
SIN3A-210ENST00000568309 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
SIN3A-210ENST00000568309 KLRG2A4D1S0 409 aaPredicted RBP11.01□□□□□ -0.65
SIN3A-210ENST00000568309 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
SIN3A-210ENST00000568309 SLC17A8Q8NDX2 589 aa11.01□□□□□ -0.65
SIN3A-210ENST00000568309 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
SIN3A-210ENST00000568309 POLKQ9UBT6 870 aa11.01□□□□□ -0.65
SIN3A-210ENST00000568309 SLC24A1O60721 1099 aa11□□□□□ -0.65
SIN3A-210ENST00000568309 CCDC102AQ96A19 550 aa11□□□□□ -0.65
SIN3A-210ENST00000568309 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
SIN3A-210ENST00000568309 GPRC5DQ9NZD1 345 aa11□□□□□ -0.65
SIN3A-210ENST00000568309 TRIOBPQ9H2D6 2365 aa10.99□□□□□ -0.65
SIN3A-210ENST00000568309 CDC37L1Q7L3B6 337 aa10.99□□□□□ -0.65
SIN3A-210ENST00000568309 ZC3H15Q8WU90 426 aaKnown RBP10.99□□□□□ -0.65
SIN3A-210ENST00000568309 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
SIN3A-210ENST00000568309 MRC1P22897 1456 aa10.99□□□□□ -0.65
SIN3A-210ENST00000568309 SLC39A6Q13433 755 aa10.98□□□□□ -0.65
SIN3A-210ENST00000568309 FBXO46Q6PJ61 603 aaPredicted RBP10.98□□□□□ -0.65
SIN3A-210ENST00000568309 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
SIN3A-210ENST00000568309 CAMTA2O94983 1202 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 STARD3NLO95772 234 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 ALDH1B1P30837 517 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 LARGE2Q8N3Y3 721 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 SIN3AQ96ST3 1273 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
SIN3A-210ENST00000568309 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
SIN3A-210ENST00000568309 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
SIN3A-210ENST00000568309 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
SIN3A-210ENST00000568309 CDHR2Q9BYE9 1310 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms