RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
SF3B3-211ENST00000568291 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.41
SF3B3-211ENST00000568291 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
SF3B3-211ENST00000568291 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
SF3B3-211ENST00000568291 ANP32CO43423 234 aa12.51□□□□□ -0.41
SF3B3-211ENST00000568291 BICDL1Q6ZP65 573 aa12.51□□□□□ -0.41
SF3B3-211ENST00000568291 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
SF3B3-211ENST00000568291 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
SF3B3-211ENST00000568291 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
SF3B3-211ENST00000568291 APAF1O14727 1248 aa12.5□□□□□ -0.41
SF3B3-211ENST00000568291 SERPINB2P05120 415 aa12.5□□□□□ -0.41
SF3B3-211ENST00000568291 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
SF3B3-211ENST00000568291 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
SF3B3-211ENST00000568291 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
SF3B3-211ENST00000568291 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
SF3B3-211ENST00000568291 EIF4A1P60842 406 aaKnown RBP12.49□□□□□ -0.41
SF3B3-211ENST00000568291 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
SF3B3-211ENST00000568291 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
SF3B3-211ENST00000568291 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-211ENST00000568291 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
SF3B3-211ENST00000568291 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
SF3B3-211ENST00000568291 A0A087WZG4 1122 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 FSTL1Q12841 308 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
SF3B3-211ENST00000568291 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
SF3B3-211ENST00000568291 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
SF3B3-211ENST00000568291 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
SF3B3-211ENST00000568291 MYL6BP14649 208 aa12.46□□□□□ -0.41
SF3B3-211ENST00000568291 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
SF3B3-211ENST00000568291 LMNB1P20700 586 aa12.46□□□□□ -0.41
SF3B3-211ENST00000568291 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.41
SF3B3-211ENST00000568291 DNAJC5GQ8N7S2 189 aa12.46□□□□□ -0.41
SF3B3-211ENST00000568291 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
SF3B3-211ENST00000568291 RRAGCQ9HB90 399 aa12.46□□□□□ -0.41
SF3B3-211ENST00000568291 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-211ENST00000568291 DLG5Q8TDM6 1919 aa12.45□□□□□ -0.42
SF3B3-211ENST00000568291 H0YIN7 160 aa12.45□□□□□ -0.42
SF3B3-211ENST00000568291 ANXA1P04083 346 aa12.45□□□□□ -0.42
SF3B3-211ENST00000568291 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-211ENST00000568291 PRELPP51888 382 aa12.45□□□□□ -0.42
SF3B3-211ENST00000568291 HTRA3P83110 453 aa12.45□□□□□ -0.42
SF3B3-211ENST00000568291 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
SF3B3-211ENST00000568291 NFKBIEO00221 500 aa12.44□□□□□ -0.42
SF3B3-211ENST00000568291 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
SF3B3-211ENST00000568291 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
SF3B3-211ENST00000568291 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
SF3B3-211ENST00000568291 SMC1BQ8NDV3 1235 aa12.44□□□□□ -0.42
SF3B3-211ENST00000568291 GLTPD2A6NH11 291 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 CHL1O00533 1208 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 PROSER3Q2NL68 480 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.424e-20■□□□□ 8.5
SF3B3-211ENST00000568291 KLRG1Q96E93 195 aa12.43□□□□□ -0.42
SF3B3-211ENST00000568291 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-211ENST00000568291 NPHP1O15259 732 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 PDE6BP35913 854 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 HLFQ16534 295 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 TTLL7Q6ZT98 887 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-211ENST00000568291 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 KDM3BQ7LBC6 1761 aa12.42□□□□□ -0.42
SF3B3-211ENST00000568291 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
SF3B3-211ENST00000568291 MBIPQ9NS73 344 aa12.41□□□□□ -0.42
SF3B3-211ENST00000568291 C21orf2O43822 256 aa12.4□□□□□ -0.42
SF3B3-211ENST00000568291 VEGFAP15692 232 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-211ENST00000568291 ST5P78524 1137 aa12.4□□□□□ -0.42
SF3B3-211ENST00000568291 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
SF3B3-211ENST00000568291 SETDB2Q96T68 719 aa12.4□□□□□ -0.42
SF3B3-211ENST00000568291 ZBTB3Q9H5J0 574 aa12.4□□□□□ -0.42
SF3B3-211ENST00000568291 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
SF3B3-211ENST00000568291 NUP98P52948 1817 aa12.39□□□□□ -0.43
SF3B3-211ENST00000568291 AIMP1Q12904 312 aaKnown RBP12.39□□□□□ -0.43
SF3B3-211ENST00000568291 PDIA6Q15084 440 aa12.39□□□□□ -0.43
SF3B3-211ENST00000568291 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
SF3B3-211ENST00000568291 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
SF3B3-211ENST00000568291 SCN4AP35499 1836 aa12.39□□□□□ -0.43
SF3B3-211ENST00000568291 GPTP24298 496 aa12.38□□□□□ -0.43
SF3B3-211ENST00000568291 ERFEQ4G0M1 354 aa12.38□□□□□ -0.43
SF3B3-211ENST00000568291 STYK1Q6J9G0 422 aa12.38□□□□□ -0.43
SF3B3-211ENST00000568291 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
SF3B3-211ENST00000568291 CNKSR1Q969H4 720 aa12.38□□□□□ -0.43
SF3B3-211ENST00000568291 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
SF3B3-211ENST00000568291 NIP7Q9Y221 180 aaKnown RBP eCLIP12.38□□□□□ -0.43
SF3B3-211ENST00000568291 TCERG1O14776 1098 aaKnown RBP12.37□□□□□ -0.43
SF3B3-211ENST00000568291 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
SF3B3-211ENST00000568291 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
SF3B3-211ENST00000568291 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
SF3B3-211ENST00000568291 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
SF3B3-211ENST00000568291 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
SF3B3-211ENST00000568291 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
SF3B3-211ENST00000568291 POTECB2RU33 542 aa12.36□□□□□ -0.43
SF3B3-211ENST00000568291 SRGNP10124 158 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms