RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 FOXR1Q6PIV2 292 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 COL25A1Q9BXS0 654 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-217ENST00000567817 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
CAPN3-217ENST00000567817 CABP1Q9NZU7 370 aa8.23□□□□□ -1.09
CAPN3-217ENST00000567817 PTPRGP23470 1445 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 CSB-PGBD3P0DP91 1061 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 SEC13P55735 322 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 NBPF1Q3BBV0 1214 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 TNS4Q8IZW8 715 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 PGBD3Q8N328 593 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 CRISPLD1Q9H336 500 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 ZDHHC3Q9NYG2 299 aa8.22□□□□□ -1.09
CAPN3-217ENST00000567817 CARMIL2Q6F5E8 1435 aa8.21□□□□□ -1.09
CAPN3-217ENST00000567817 COL17A1Q9UMD9 1497 aaPredicted RBP8.21□□□□□ -1.09
CAPN3-217ENST00000567817 SFI1A8K8P3 1242 aa8.21□□□□□ -1.1
CAPN3-217ENST00000567817 KRT76Q01546 638 aa8.21□□□□□ -1.1
CAPN3-217ENST00000567817 TEAD4Q15561 434 aa8.21□□□□□ -1.1
CAPN3-217ENST00000567817 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.1
CAPN3-217ENST00000567817 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-217ENST00000567817 EPRSP07814 1512 aaKnown RBP8.2□□□□□ -1.1
CAPN3-217ENST00000567817 ATP4AP20648 1035 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
CAPN3-217ENST00000567817 EFHC2Q5JST6 749 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 ANKMY2Q8IV38 441 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 TSEN2Q8NCE0 465 aaKnown RBP8.2□□□□□ -1.1
CAPN3-217ENST00000567817 GTPBP3Q969Y2 492 aaKnown RBP8.2□□□□□ -1.1
CAPN3-217ENST00000567817 CNTNAP3BQ96NU0 1288 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 CNTNAP3Q9BZ76 1288 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 SERPINA10Q9UK55 444 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 TNIKQ9UKE5 1360 aa8.2□□□□□ -1.1
CAPN3-217ENST00000567817 THBS1P07996 1170 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 TATP17735 454 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-217ENST00000567817 RFX1P22670 979 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 DPYDQ12882 1025 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 TRIM26Q12899 539 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-217ENST00000567817 RNFT1Q5M7Z0 435 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 ZSCAN1Q8NBB4 408 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 ZDHHC1Q8WTX9 485 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 TSPAN10Q9H1Z9 355 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-217ENST00000567817 RUBCNLQ9H714 662 aa8.19□□□□□ -1.1
CAPN3-217ENST00000567817 NOS2P35228 1153 aa8.18□□□□□ -1.1
CAPN3-217ENST00000567817 GAS6Q14393 721 aa8.18□□□□□ -1.1
CAPN3-217ENST00000567817 AIDAQ96BJ3 306 aa8.18□□□□□ -1.1
CAPN3-217ENST00000567817 PCGF6Q9BYE7 350 aa8.18□□□□□ -1.1
CAPN3-217ENST00000567817 CHMP3Q9Y3E7 222 aa8.18□□□□□ -1.1
CAPN3-217ENST00000567817 KDM5BQ9UGL1 1544 aa8.18□□□□□ -1.1
CAPN3-217ENST00000567817 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 ARID3CA6NKF2 412 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 GPR25O00155 361 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-217ENST00000567817 TBCELQ5QJ74 424 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 POTEAQ6S8J7 498 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 NLRP8Q86W28 1048 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 GAS2L2Q8NHY3 880 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 L3MBTL2Q969R5 705 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 ARXQ96QS3 562 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 MBIPQ9NS73 344 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 STK17AQ9UEE5 414 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 PHF24Q9UPV7 400 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 MAGI3Q5TCQ9 1506 aa8.17□□□□□ -1.1
CAPN3-217ENST00000567817 PCF11O94913 1555 aaKnown RBP8.17□□□□□ -1.1
CAPN3-217ENST00000567817 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-217ENST00000567817 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
CAPN3-217ENST00000567817 CUL7Q14999 1698 aa8.16□□□□□ -1.1
CAPN3-217ENST00000567817 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
CAPN3-217ENST00000567817 UACAQ9BZF9 1416 aa8.16□□□□□ -1.1
CAPN3-217ENST00000567817 DISP3Q9P2K9 1392 aa8.16□□□□□ -1.1
CAPN3-217ENST00000567817 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
CAPN3-217ENST00000567817 GPC6Q9Y625 555 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-217ENST00000567817 PTPRMP28827 1452 aa8.15□□□□□ -1.1
CAPN3-217ENST00000567817 EML1O00423 815 aa8.15□□□□□ -1.1
CAPN3-217ENST00000567817 TXLNAP40222 546 aa8.15□□□□□ -1.1
CAPN3-217ENST00000567817 SRSF11Q05519 484 aaKnown RBP8.15□□□□□ -1.1
CAPN3-217ENST00000567817 ELOAQ14241 798 aaKnown RBP8.15□□□□□ -1.1
CAPN3-217ENST00000567817 FIGNL1Q6PIW4 674 aa8.15□□□□□ -1.1
CAPN3-217ENST00000567817 STAG2Q8N3U4 1231 aa8.15□□□□□ -1.1
CAPN3-217ENST00000567817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-217ENST00000567817 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 C21orf2O43822 256 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 PPP1R12BO60237 982 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-217ENST00000567817 SLURP2P0DP57 97 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 SRPK2P78362 688 aaKnown RBP8.14□□□□□ -1.11
CAPN3-217ENST00000567817 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 ARSJQ5FYB0 599 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-217ENST00000567817 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 HINFPQ9BQA5 517 aa8.14□□□□□ -1.11
CAPN3-217ENST00000567817 ATXN7L1Q9ULK2 861 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-217ENST00000567817 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
CAPN3-217ENST00000567817 WDR7Q9Y4E6 1490 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 EEA1Q15075 1411 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 ATAD2Q6PL18 1390 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-217ENST00000567817 SH3PXD2AQ5TCZ1 1133 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms