RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 SETDB2Q96T68 719 aa19.5■□□□□ 0.71
COMMD4-219ENST00000567399 ZBTB3Q9H5J0 574 aa19.5■□□□□ 0.71
COMMD4-219ENST00000567399 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
COMMD4-219ENST00000567399 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
COMMD4-219ENST00000567399 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
COMMD4-219ENST00000567399 NFIXQ14938 502 aa19.49■□□□□ 0.71
COMMD4-219ENST00000567399 CLEC4GQ6UXB4 293 aa19.49■□□□□ 0.71
COMMD4-219ENST00000567399 CDCA7LQ96GN5 454 aa19.49■□□□□ 0.71
COMMD4-219ENST00000567399 FHDC1Q9C0D6 1143 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-219ENST00000567399 MAP3K15Q6ZN16 1313 aa19.49■□□□□ 0.71
COMMD4-219ENST00000567399 ERVV-1B6SEH8 477 aa19.48■□□□□ 0.71
COMMD4-219ENST00000567399 TM4SF1P30408 202 aa19.48■□□□□ 0.71
COMMD4-219ENST00000567399 TBC1D9BQ66K14 1250 aa19.48■□□□□ 0.71
COMMD4-219ENST00000567399 VAMP4O75379 141 aa19.46■□□□□ 0.71
COMMD4-219ENST00000567399 SERPINB2P05120 415 aa19.46■□□□□ 0.71
COMMD4-219ENST00000567399 HLFQ16534 295 aa19.46■□□□□ 0.71
COMMD4-219ENST00000567399 NIP7Q9Y221 180 aaKnown RBP eCLIP19.46■□□□□ 0.71
COMMD4-219ENST00000567399 SLC4A2P04920 1241 aa19.45■□□□□ 0.7
COMMD4-219ENST00000567399 DDR1Q08345 913 aa19.45■□□□□ 0.7
COMMD4-219ENST00000567399 SYT17Q9BSW7 474 aa19.45■□□□□ 0.7
COMMD4-219ENST00000567399 DCAF8L1A6NGE4 600 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 FAM177BA6PVY3 158 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
COMMD4-219ENST00000567399 RGL2O15211 777 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
COMMD4-219ENST00000567399 ANKRD13DQ6ZTN6 518 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 LRP10Q7Z4F1 713 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
COMMD4-219ENST00000567399 GTF2E1P29083 439 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-219ENST00000567399 HSP90AB3PQ58FF7 597 aa19.43■□□□□ 0.7
COMMD4-219ENST00000567399 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
COMMD4-219ENST00000567399 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
COMMD4-219ENST00000567399 COL24A1Q17RW2 1714 aa19.42■□□□□ 0.7
COMMD4-219ENST00000567399 GPTP24298 496 aa19.42■□□□□ 0.7
COMMD4-219ENST00000567399 GIGYF2Q6Y7W6 1299 aaKnown RBP19.42■□□□□ 0.7
COMMD4-219ENST00000567399 NBPF5PQ86XG9 351 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-219ENST00000567399 PLBD2Q8NHP8 589 aa19.42■□□□□ 0.7
COMMD4-219ENST00000567399 SCN7AQ01118 1682 aa19.42■□□□□ 0.7
COMMD4-219ENST00000567399 ST5P78524 1137 aa19.41■□□□□ 0.7
COMMD4-219ENST00000567399 TPTE2Q6XPS3 522 aa19.41■□□□□ 0.7
COMMD4-219ENST00000567399 CNBD1Q8NA66 436 aa19.4■□□□□ 0.7
COMMD4-219ENST00000567399 BCORQ6W2J9 1755 aa19.39■□□□□ 0.7
COMMD4-219ENST00000567399 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
COMMD4-219ENST00000567399 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
COMMD4-219ENST00000567399 NYXQ9GZU5 481 aa19.39■□□□□ 0.69
COMMD4-219ENST00000567399 ZBED9Q6R2W3 1325 aa19.39■□□□□ 0.69
COMMD4-219ENST00000567399 TCIRG1Q13488 830 aa19.38■□□□□ 0.69
COMMD4-219ENST00000567399 PPP1R42Q7Z4L9 355 aa19.38■□□□□ 0.69
COMMD4-219ENST00000567399 NLGN2Q8NFZ4 835 aa19.38■□□□□ 0.69
COMMD4-219ENST00000567399 TGFB2P61812 414 aa19.37■□□□□ 0.69
COMMD4-219ENST00000567399 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-219ENST00000567399 PARP10Q53GL7 1025 aa19.37■□□□□ 0.69
COMMD4-219ENST00000567399 ZNF34Q8IZ26 560 aa19.37■□□□□ 0.69
COMMD4-219ENST00000567399 CCDC24Q8N4L8 307 aa19.37■□□□□ 0.69
COMMD4-219ENST00000567399 FLIIQ13045 1269 aa19.36■□□□□ 0.69
COMMD4-219ENST00000567399 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
COMMD4-219ENST00000567399 G2E3Q7L622 706 aa19.36■□□□□ 0.69
COMMD4-219ENST00000567399 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
COMMD4-219ENST00000567399 A0A0G2JLW4 131 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 ATP5J2-PTCD1G3V325 749 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-219ENST00000567399 PDE6BP35913 854 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 NEXNQ0ZGT2 675 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 GPR162Q16538 588 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 SUSD4Q5VX71 490 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 KSR2Q6VAB6 950 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 MYD88Q99836 296 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 UTP14AQ9BVJ6 771 aaKnown RBP19.35■□□□□ 0.69
COMMD4-219ENST00000567399 MAP3K2Q9Y2U5 619 aa19.35■□□□□ 0.69
COMMD4-219ENST00000567399 C10orf71Q711Q0 1435 aa19.34■□□□□ 0.69
COMMD4-219ENST00000567399 ATP10DQ9P241 1426 aa19.34■□□□□ 0.69
COMMD4-219ENST00000567399 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
COMMD4-219ENST00000567399 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
COMMD4-219ENST00000567399 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
COMMD4-219ENST00000567399 WWC3Q9ULE0 1092 aa19.34■□□□□ 0.69
COMMD4-219ENST00000567399 H0YIN7 160 aa19.33■□□□□ 0.68
COMMD4-219ENST00000567399 DPEP1P16444 411 aa19.33■□□□□ 0.68
COMMD4-219ENST00000567399 NUTM1Q86Y26 1132 aa19.33■□□□□ 0.68
COMMD4-219ENST00000567399 C2CD5Q86YS7 1000 aa19.33■□□□□ 0.68
COMMD4-219ENST00000567399 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
COMMD4-219ENST00000567399 SMC4Q9NTJ3 1288 aa19.33■□□□□ 0.68
COMMD4-219ENST00000567399 TRMT112Q9UI30 125 aaKnown RBP19.33■□□□□ 0.68
COMMD4-219ENST00000567399 NUP98P52948 1817 aa19.32■□□□□ 0.68
COMMD4-219ENST00000567399 UBN2Q6ZU65 1347 aa19.32■□□□□ 0.68
COMMD4-219ENST00000567399 NLRP10Q86W26 655 aa19.32■□□□□ 0.68
COMMD4-219ENST00000567399 METTL22Q9BUU2 404 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-219ENST00000567399 BCL2L13Q9BXK5 485 aa19.32■□□□□ 0.68
COMMD4-219ENST00000567399 CHRNA5P30532 468 aa19.31■□□□□ 0.68
COMMD4-219ENST00000567399 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
COMMD4-219ENST00000567399 ERFEQ4G0M1 354 aa19.31■□□□□ 0.68
COMMD4-219ENST00000567399 SSH1Q8WYL5 1049 aa19.31■□□□□ 0.68
COMMD4-219ENST00000567399 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
COMMD4-219ENST00000567399 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
COMMD4-219ENST00000567399 ZNF622Q969S3 477 aaKnown RBP eCLIP19.3■□□□□ 0.68
COMMD4-219ENST00000567399 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
COMMD4-219ENST00000567399 PIM2Q9P1W9 311 aa19.3■□□□□ 0.68
COMMD4-219ENST00000567399 AFDNP55196 1824 aaKnown RBP19.3■□□□□ 0.68
COMMD4-219ENST00000567399 DNAAF4Q8WXU2 420 aa19.29■□□□□ 0.68
COMMD4-219ENST00000567399 NTSR2O95665 410 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms