RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
SF3B3-208ENST00000567250 PDIA6Q15084 440 aa15.64■□□□□ 0.09
SF3B3-208ENST00000567250 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
SF3B3-208ENST00000567250 NRXN2Q9P2S2 1712 aa15.64■□□□□ 0.09
SF3B3-208ENST00000567250 PPP1R1BQ9UD71 204 aaPredicted RBP15.64■□□□□ 0.09
SF3B3-208ENST00000567250 SRP68Q9UHB9 627 aaKnown RBP15.64■□□□□ 0.09
SF3B3-208ENST00000567250 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
SF3B3-208ENST00000567250 CLEC4GQ6UXB4 293 aa15.63■□□□□ 0.09
SF3B3-208ENST00000567250 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
SF3B3-208ENST00000567250 KIF13BQ9NQT8 1826 aa15.63■□□□□ 0.09
SF3B3-208ENST00000567250 MAP3K15Q6ZN16 1313 aa15.63■□□□□ 0.09
SF3B3-208ENST00000567250 ERVV-1B6SEH8 477 aa15.62■□□□□ 0.09
SF3B3-208ENST00000567250 VAMP4O75379 141 aa15.62■□□□□ 0.09
SF3B3-208ENST00000567250 CAMTA2O94983 1202 aa15.62■□□□□ 0.09
SF3B3-208ENST00000567250 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
SF3B3-208ENST00000567250 LRP10Q7Z4F1 713 aa15.62■□□□□ 0.09
SF3B3-208ENST00000567250 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
SF3B3-208ENST00000567250 CARMIL3Q8ND23 1372 aa15.62■□□□□ 0.09
SF3B3-208ENST00000567250 ATP10DQ9P241 1426 aa15.61■□□□□ 0.09
SF3B3-208ENST00000567250 ANXA1P04083 346 aa15.61■□□□□ 0.09
SF3B3-208ENST00000567250 MMP10P09238 476 aa15.61■□□□□ 0.09
SF3B3-208ENST00000567250 PTGER2P43116 358 aa15.61■□□□□ 0.09
SF3B3-208ENST00000567250 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
SF3B3-208ENST00000567250 DDX58O95786 925 aaKnown RBP15.6■□□□□ 0.09
SF3B3-208ENST00000567250 AIMP1Q12904 312 aaKnown RBP15.6■□□□□ 0.09
SF3B3-208ENST00000567250 FKBP8Q14318 412 aa15.6■□□□□ 0.09
SF3B3-208ENST00000567250 HSP90AB3PQ58FF7 597 aa15.6■□□□□ 0.09
SF3B3-208ENST00000567250 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
SF3B3-208ENST00000567250 XAGE3Q8WTP9 111 aa15.6■□□□□ 0.09
SF3B3-208ENST00000567250 PARP3Q9Y6F1 533 aa15.6■□□□□ 0.09
SF3B3-208ENST00000567250 TTLL7Q6ZT98 887 aa15.59■□□□□ 0.09
SF3B3-208ENST00000567250 ZBTB3Q9H5J0 574 aa15.59■□□□□ 0.09
SF3B3-208ENST00000567250 BCL2L12Q9HB09 334 aa15.59■□□□□ 0.09
SF3B3-208ENST00000567250 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
SF3B3-208ENST00000567250 GIGYF2Q6Y7W6 1299 aaKnown RBP15.58■□□□□ 0.08
SF3B3-208ENST00000567250 PLBD2Q8NHP8 589 aa15.58■□□□□ 0.08
SF3B3-208ENST00000567250 C10orf71Q711Q0 1435 aa15.58■□□□□ 0.08
SF3B3-208ENST00000567250 NFIXQ14938 502 aa15.57■□□□□ 0.08
SF3B3-208ENST00000567250 ALDH1L2Q3SY69 923 aa15.57■□□□□ 0.08
SF3B3-208ENST00000567250 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
SF3B3-208ENST00000567250 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
SF3B3-208ENST00000567250 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
SF3B3-208ENST00000567250 N4BP2Q86UW6 1770 aaPredicted RBP15.57■□□□□ 0.08
SF3B3-208ENST00000567250 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
SF3B3-208ENST00000567250 NPHP1O15259 732 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 TM4SF1P30408 202 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 BICDL1Q6ZP65 573 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 RIC3Q7Z5B4 369 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 PHAXQ9H814 394 aaKnown RBP15.56■□□□□ 0.08
SF3B3-208ENST00000567250 NIP7Q9Y221 180 aaKnown RBP eCLIP15.56■□□□□ 0.08
SF3B3-208ENST00000567250 LAMB2P55268 1798 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 DLEC1Q9Y238 1755 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 SRCAPQ6ZRS2 3230 aa15.56■□□□□ 0.08
SF3B3-208ENST00000567250 TCERG1O14776 1098 aaKnown RBP15.55■□□□□ 0.08
SF3B3-208ENST00000567250 DDR1Q08345 913 aa15.55■□□□□ 0.08
SF3B3-208ENST00000567250 FLIIQ13045 1269 aa15.55■□□□□ 0.08
SF3B3-208ENST00000567250 HLFQ16534 295 aa15.55■□□□□ 0.08
SF3B3-208ENST00000567250 PARP10Q53GL7 1025 aa15.55■□□□□ 0.08
SF3B3-208ENST00000567250 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
SF3B3-208ENST00000567250 ANKRD31Q8N7Z5 1873 aa15.54■□□□□ 0.08
SF3B3-208ENST00000567250 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
SF3B3-208ENST00000567250 SERPINB2P05120 415 aa15.54■□□□□ 0.08
SF3B3-208ENST00000567250 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
SF3B3-208ENST00000567250 SMC4Q9NTJ3 1288 aa15.54■□□□□ 0.08
SF3B3-208ENST00000567250 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
SF3B3-208ENST00000567250 PTPRCP08575 1304 aa15.53■□□□□ 0.08
SF3B3-208ENST00000567250 ST5P78524 1137 aa15.53■□□□□ 0.08
SF3B3-208ENST00000567250 NEXNQ0ZGT2 675 aa15.53■□□□□ 0.08
SF3B3-208ENST00000567250 NBPF5PQ86XG9 351 aaPredicted RBP15.53■□□□□ 0.08
SF3B3-208ENST00000567250 CNBD1Q8NA66 436 aa15.53■□□□□ 0.08
SF3B3-208ENST00000567250 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
SF3B3-208ENST00000567250 NYXQ9GZU5 481 aa15.53■□□□□ 0.08
SF3B3-208ENST00000567250 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
SF3B3-208ENST00000567250 PXDNLA1KZ92 1463 aa15.52■□□□□ 0.08
SF3B3-208ENST00000567250 KIF16BQ96L93 1317 aa15.52■□□□□ 0.08
SF3B3-208ENST00000567250 TCIRG1Q13488 830 aa15.52■□□□□ 0.08
SF3B3-208ENST00000567250 KSR2Q6VAB6 950 aa15.52■□□□□ 0.08
SF3B3-208ENST00000567250 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
SF3B3-208ENST00000567250 FHDC1Q9C0D6 1143 aaPredicted RBP15.52■□□□□ 0.08
SF3B3-208ENST00000567250 BRCA1P38398 1863 aaKnown RBP15.52■□□□□ 0.07
SF3B3-208ENST00000567250 ADCY9O60503 1353 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 GPTP24298 496 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 ZNF34Q8IZ26 560 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 SSH1Q8WYL5 1049 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 MAP3K2Q9Y2U5 619 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
SF3B3-208ENST00000567250 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
SF3B3-208ENST00000567250 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
SF3B3-208ENST00000567250 GTF2E1P29083 439 aaPredicted RBP15.5■□□□□ 0.07
SF3B3-208ENST00000567250 G2E3Q7L622 706 aa15.5■□□□□ 0.07
SF3B3-208ENST00000567250 MRPL50Q8N5N7 158 aaKnown RBP15.5■□□□□ 0.07
SF3B3-208ENST00000567250 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
SF3B3-208ENST00000567250 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
SF3B3-208ENST00000567250 DDX60Q8IY21 1712 aaKnown RBP15.49■□□□□ 0.07
SF3B3-208ENST00000567250 TNRC6CQ9HCJ0 1690 aaKnown RBP15.49■□□□□ 0.07
SF3B3-208ENST00000567250 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
SF3B3-208ENST00000567250 BRPF1P55201 1214 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms