RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 L1TD1Q5T7N2 865 aaKnown RBP28.62■■■□□ 2.17
LINC00543-201ENST00000567234 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.62■■■□□ 2.17
LINC00543-201ENST00000567234 SRGAP3O43295 1099 aa28.62■■■□□ 2.17
LINC00543-201ENST00000567234 RIC3Q7Z5B4 369 aa28.62■■■□□ 2.17
LINC00543-201ENST00000567234 SDSP20132 328 aa28.61■■■□□ 2.17
LINC00543-201ENST00000567234 AIMP1Q12904 312 aaKnown RBP28.61■■■□□ 2.17
LINC00543-201ENST00000567234 DDX54Q8TDD1 881 aaKnown RBP28.61■■■□□ 2.17
LINC00543-201ENST00000567234 STAP2Q9UGK3 403 aa28.61■■■□□ 2.17
LINC00543-201ENST00000567234 NEXNQ0ZGT2 675 aa28.6■■■□□ 2.17
LINC00543-201ENST00000567234 XAGE3Q8WTP9 111 aa28.6■■■□□ 2.17
LINC00543-201ENST00000567234 AOX1Q06278 1338 aa28.6■■■□□ 2.17
LINC00543-201ENST00000567234 GRM8O00222 908 aa28.59■■■□□ 2.17
LINC00543-201ENST00000567234 MYL6BP14649 208 aa28.59■■■□□ 2.17
LINC00543-201ENST00000567234 CASC1Q6TDU7 716 aa28.59■■■□□ 2.17
LINC00543-201ENST00000567234 COPS6Q7L5N1 327 aa28.59■■■□□ 2.17
LINC00543-201ENST00000567234 METTL22Q9BUU2 404 aaPredicted RBP28.59■■■□□ 2.17
LINC00543-201ENST00000567234 USP21Q9UK80 565 aa28.59■■■□□ 2.17
LINC00543-201ENST00000567234 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.59■■■□□ 2.17
LINC00543-201ENST00000567234 KCPQ6ZWJ8 1503 aa28.59■■■□□ 2.17
LINC00543-201ENST00000567234 SURF6O75683 361 aaKnown RBP28.58■■■□□ 2.17
LINC00543-201ENST00000567234 CWF19L2Q2TBE0 894 aaKnown RBP28.58■■■□□ 2.17
LINC00543-201ENST00000567234 TNS2Q63HR2 1409 aa28.58■■■□□ 2.17
LINC00543-201ENST00000567234 MX1P20591 662 aa28.57■■■□□ 2.16
LINC00543-201ENST00000567234 ANKRD13DQ6ZTN6 518 aa28.57■■■□□ 2.16
LINC00543-201ENST00000567234 KIF1BPQ96EK5 621 aa28.57■■■□□ 2.16
LINC00543-201ENST00000567234 TBC1D2Q9BYX2 928 aa28.57■■■□□ 2.16
LINC00543-201ENST00000567234 TOGARAM1Q9Y4F4 1720 aa28.56■■■□□ 2.16
LINC00543-201ENST00000567234 ARFGEF2Q9Y6D5 1785 aa28.56■■■□□ 2.16
LINC00543-201ENST00000567234 IGKV5-2P06315 115 aa28.55■■■□□ 2.16
LINC00543-201ENST00000567234 AFF2P51816 1311 aa28.55■■■□□ 2.16
LINC00543-201ENST00000567234 NEURL1BA8MQ27 555 aa28.55■■■□□ 2.16
LINC00543-201ENST00000567234 VPS72Q15906 364 aa28.55■■■□□ 2.16
LINC00543-201ENST00000567234 RHPN1Q8TCX5 695 aa28.54■■■□□ 2.16
LINC00543-201ENST00000567234 THRAP3Q9Y2W1 955 aaKnown RBP28.54■■■□□ 2.16
LINC00543-201ENST00000567234 AFDNP55196 1824 aaKnown RBP28.52■■■□□ 2.16
LINC00543-201ENST00000567234 GCKRQ14397 625 aa28.52■■■□□ 2.16
LINC00543-201ENST00000567234 PLBD2Q8NHP8 589 aa28.51■■■□□ 2.15
LINC00543-201ENST00000567234 SNX21Q969T3 373 aa28.51■■■□□ 2.15
LINC00543-201ENST00000567234 FRAT2O75474 233 aaPredicted RBP28.5■■■□□ 2.15
LINC00543-201ENST00000567234 FAM98CQ17RN3 349 aaKnown RBP28.5■■■□□ 2.15
LINC00543-201ENST00000567234 COL15A1P39059 1388 aa28.5■■■□□ 2.15
LINC00543-201ENST00000567234 EXOC5O00471 708 aa28.5■■■□□ 2.15
LINC00543-201ENST00000567234 ERC1Q8IUD2 1116 aa28.5■■■□□ 2.15
LINC00543-201ENST00000567234 SUCLG2Q96I99 432 aa28.5■■■□□ 2.15
LINC00543-201ENST00000567234 MYD88Q99836 296 aa28.5■■■□□ 2.15
LINC00543-201ENST00000567234 BARGINQ6ZT62 677 aa28.49■■■□□ 2.15
LINC00543-201ENST00000567234 TMOD3Q9NYL9 352 aa28.49■■■□□ 2.15
LINC00543-201ENST00000567234 ITGB4P16144 1822 aa28.49■■■□□ 2.15
LINC00543-201ENST00000567234 KAZALD1Q96I82 304 aa28.48■■■□□ 2.15
LINC00543-201ENST00000567234 KIF2CQ99661 725 aa28.48■■■□□ 2.15
LINC00543-201ENST00000567234 REC8O95072 547 aa28.47■■■□□ 2.15
LINC00543-201ENST00000567234 IL1RAPL2Q9NP60 686 aa28.47■■■□□ 2.15
LINC00543-201ENST00000567234 NUP188Q5SRE5 1749 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 NBPF26B4DH59 902 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 GLIPR1L2Q4G1C9 344 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 NBPF14Q5TI25 921 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 NBPF10Q6P3W6 841 aaKnown RBP28.46■■■□□ 2.15
LINC00543-201ENST00000567234 NBPF15Q8N660 670 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 CDCA7Q9BWT1 371 aaPredicted RBP28.46■■■□□ 2.15
LINC00543-201ENST00000567234 USP26Q9BXU7 913 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 BICC1Q9H694 974 aaKnown RBP28.46■■■□□ 2.15
LINC00543-201ENST00000567234 USP42Q9H9J4 1324 aaKnown RBP28.46■■■□□ 2.15
LINC00543-201ENST00000567234 DDB1Q16531 1140 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 HSCBQ8IWL3 235 aa28.46■■■□□ 2.15
LINC00543-201ENST00000567234 AK9Q5TCS8 1911 aa28.45■■■□□ 2.14
LINC00543-201ENST00000567234 VSIG10Q8N0Z9 540 aa28.45■■■□□ 2.14
LINC00543-201ENST00000567234 TEX13AQ9BXU3 409 aaPredicted RBP28.45■■■□□ 2.14
LINC00543-201ENST00000567234 ERC2O15083 957 aa28.44■■■□□ 2.14
LINC00543-201ENST00000567234 PIP4K2AP48426 406 aaPredicted RBP28.43■■■□□ 2.14
LINC00543-201ENST00000567234 OS9Q13438 667 aaPredicted RBP28.43■■■□□ 2.14
LINC00543-201ENST00000567234 KAT6BQ8WYB5 2073 aa28.43■■■□□ 2.14
LINC00543-201ENST00000567234 FBXO41Q8TF61 875 aa28.43■■■□□ 2.14
LINC00543-201ENST00000567234 ATRNO75882 1429 aa28.42■■■□□ 2.14
LINC00543-201ENST00000567234 PTCD1O75127 700 aaKnown RBP28.42■■■□□ 2.14
LINC00543-201ENST00000567234 ANTXR1Q9H6X2 564 aa28.42■■■□□ 2.14
LINC00543-201ENST00000567234 TTC41PQ6P2S7 1318 aa28.42■■■□□ 2.14
LINC00543-201ENST00000567234 NUTM1Q86Y26 1132 aa28.41■■■□□ 2.14
LINC00543-201ENST00000567234 CLASRPQ8N2M8 674 aaKnown RBP28.41■■■□□ 2.14
LINC00543-201ENST00000567234 TSHZ3Q63HK5 1081 aa28.41■■■□□ 2.14
LINC00543-201ENST00000567234 GJD4Q96KN9 370 aaPredicted RBP28.41■■■□□ 2.14
LINC00543-201ENST00000567234 DOT1LQ8TEK3 1739 aa28.41■■■□□ 2.14
LINC00543-201ENST00000567234 MARCH10Q8NA82 808 aaPredicted RBP28.4■■■□□ 2.14
LINC00543-201ENST00000567234 PI4K2BQ8TCG2 481 aa28.4■■■□□ 2.14
LINC00543-201ENST00000567234 PIGBQ92521 554 aa28.4■■■□□ 2.14
LINC00543-201ENST00000567234 THSD7AQ9UPZ6 1657 aa28.4■■■□□ 2.14
LINC00543-201ENST00000567234 A0A0G2JS52 829 aa28.39■■■□□ 2.13
LINC00543-201ENST00000567234 TRIM6-TRIM34B2RNG4 842 aa28.39■■■□□ 2.13
LINC00543-201ENST00000567234 A1BGP04217 495 aa28.39■■■□□ 2.13
LINC00543-201ENST00000567234 G3BP1Q13283 466 aaKnown RBP eCLIP28.38■■■□□ 2.13
LINC00543-201ENST00000567234 RABL6Q3YEC7 729 aaPredicted RBP28.38■■■□□ 2.13
LINC00543-201ENST00000567234 BCL9O00512 1426 aa28.37■■■□□ 2.13
LINC00543-201ENST00000567234 CHMLP26374 656 aa28.37■■■□□ 2.13
LINC00543-201ENST00000567234 TRPC5Q9UL62 973 aaPredicted RBP28.37■■■□□ 2.13
LINC00543-201ENST00000567234 RABEP1Q15276 862 aa28.36■■■□□ 2.13
LINC00543-201ENST00000567234 RILPL2Q969X0 211 aa28.36■■■□□ 2.13
LINC00543-201ENST00000567234 ESYT1Q9BSJ8 1104 aa28.36■■■□□ 2.13
LINC00543-201ENST00000567234 PA2G4Q9UQ80 394 aaKnown RBP28.36■■■□□ 2.13
LINC00543-201ENST00000567234 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
LINC00543-201ENST00000567234 A0A087WZG4 1122 aa28.35■■■□□ 2.13
LINC00543-201ENST00000567234 EPB41L2O43491 1005 aaKnown RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms