RNA–Protein interactions for RNA: ENST00000567232.1

TNRC6A-212, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-212ENST00000567232 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
TNRC6A-212ENST00000567232 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
TNRC6A-212ENST00000567232 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
TNRC6A-212ENST00000567232 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
TNRC6A-212ENST00000567232 DLEC1Q9Y238 1755 aa12.02□□□□□ -0.48
TNRC6A-212ENST00000567232 USP50Q70EL3 339 aaPredicted RBP12.02□□□□□ -0.49
TNRC6A-212ENST00000567232 DPF3Q92784 378 aa12.02□□□□□ -0.49
TNRC6A-212ENST00000567232 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
TNRC6A-212ENST00000567232 AKAP11Q9UKA4 1901 aa12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 FZD9O00144 591 aa12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 CYP27B1O15528 508 aa12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 ZNF157P51786 506 aaPredicted RBP12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 LAMA2P24043 3122 aaKnown RBP12.01□□□□□ -0.49
TNRC6A-212ENST00000567232 GPR25O00155 361 aa12□□□□□ -0.49
TNRC6A-212ENST00000567232 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
TNRC6A-212ENST00000567232 SCNN1DP51172 638 aa12□□□□□ -0.49
TNRC6A-212ENST00000567232 DLK2Q6UY11 383 aa12□□□□□ -0.49
TNRC6A-212ENST00000567232 USHBP1Q8N6Y0 703 aa12□□□□□ -0.49
TNRC6A-212ENST00000567232 SERPINB2P05120 415 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 NFIXQ14938 502 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 IP6K1Q92551 441 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 ITGB4P16144 1822 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 EYSQ5T1H1 3165 aa11.99□□□□□ -0.49
TNRC6A-212ENST00000567232 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
TNRC6A-212ENST00000567232 ALYREFQ86V81 257 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-212ENST00000567232 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
TNRC6A-212ENST00000567232 FAM208AQ9UK61 1670 aaKnown RBP11.97□□□□□ -0.49
TNRC6A-212ENST00000567232 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
TNRC6A-212ENST00000567232 TNFRSF10AO00220 468 aa11.97□□□□□ -0.49
TNRC6A-212ENST00000567232 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
TNRC6A-212ENST00000567232 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
TNRC6A-212ENST00000567232 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
TNRC6A-212ENST00000567232 PRUNE2Q8WUY3 3088 aa11.96□□□□□ -0.49
TNRC6A-212ENST00000567232 RAPGEF4Q8WZA2 1011 aa11.96□□□□□ -0.49
TNRC6A-212ENST00000567232 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
TNRC6A-212ENST00000567232 TRIM17Q9Y577 477 aa11.96□□□□□ -0.49
TNRC6A-212ENST00000567232 LTN1O94822 1766 aa11.96□□□□□ -0.49
TNRC6A-212ENST00000567232 RBBP6Q7Z6E9 1792 aaKnown RBP11.96□□□□□ -0.49
TNRC6A-212ENST00000567232 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 WTIPA6NIX2 430 aaPredicted RBP11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 SLC10A3P09131 477 aa11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 TATP17735 454 aaPredicted RBP11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 PRPF40BQ6NWY9 871 aaKnown RBP11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
TNRC6A-212ENST00000567232 KDRP35968 1356 aa11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 CGNL1Q0VF96 1302 aa11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 FKTNO75072 461 aa11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 SOGA3Q5TF21 947 aa11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
TNRC6A-212ENST00000567232 RPTORQ8N122 1335 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 ZPR1O75312 459 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 FKBP4Q02790 459 aaKnown RBP eCLIP11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 OLFM4Q6UX06 510 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 ARMC5Q96C12 935 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 R3HDMLQ9H3Y0 253 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
TNRC6A-212ENST00000567232 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 OTOP1Q7RTM1 612 aa11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 NME9Q86XW9 330 aa11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 GBA2Q9HCG7 927 aaPredicted RBP11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 MYH14Q7Z406 1995 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-212ENST00000567232 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 PKD1L2Q7Z442 2459 aa11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 CRKLP46109 303 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 CCDC93Q567U6 631 aa11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 C7orf43Q8WVR3 580 aa11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 CNKSR1Q969H4 720 aa11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 ADARB2Q9NS39 739 aaKnown RBP11.91□□□□□ -0.5
TNRC6A-212ENST00000567232 RGPD2P0DJD1 1756 aa11.9□□□□□ -0.5
TNRC6A-212ENST00000567232 PDE6BP35913 854 aa11.9□□□□□ -0.5
TNRC6A-212ENST00000567232 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
TNRC6A-212ENST00000567232 C2orf69Q8N8R5 385 aa11.9□□□□□ -0.5
TNRC6A-212ENST00000567232 PGAP2Q9UHJ9 254 aa11.9□□□□□ -0.5
TNRC6A-212ENST00000567232 NRXN2Q9P2S2 1712 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 MYCP01106 439 aaPredicted RBP11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 SLC4A8Q2Y0W8 1093 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 GUCD1Q96NT3 240 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 BRIP1Q9BX63 1249 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 CACNA1SQ13698 1873 aa11.89□□□□□ -0.51
TNRC6A-212ENST00000567232 ZBTB7BO15156 539 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms