RNA–Protein interactions for RNA: ENST00000567019.1

EPB42-206, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best)

Gene EPB42, Length 1,628 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-206ENST00000567019 ALDH1L1O75891 902 aa19.38■□□□□ 0.69
EPB42-206ENST00000567019 INTS5Q6P9B9 1019 aaKnown RBP19.38■□□□□ 0.69
EPB42-206ENST00000567019 TTLL7Q6ZT98 887 aa19.38■□□□□ 0.69
EPB42-206ENST00000567019 RREB1Q92766 1687 aa19.37■□□□□ 0.69
EPB42-206ENST00000567019 ARXQ96QS3 562 aa19.37■□□□□ 0.69
EPB42-206ENST00000567019 PCDHB15Q9Y5E8 787 aa19.37■□□□□ 0.69
EPB42-206ENST00000567019 HMGB2P26583 209 aaKnown RBP19.36■□□□□ 0.69
EPB42-206ENST00000567019 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
EPB42-206ENST00000567019 MEIS3Q99687 375 aa19.36■□□□□ 0.69
EPB42-206ENST00000567019 CNTNAP4Q9C0A0 1308 aa19.36■□□□□ 0.69
EPB42-206ENST00000567019 NUP188Q5SRE5 1749 aa19.36■□□□□ 0.69
EPB42-206ENST00000567019 MYD88Q99836 296 aa19.36■□□□□ 0.69
EPB42-206ENST00000567019 RWDD1Q9H446 243 aaPredicted RBP19.36■□□□□ 0.69
EPB42-206ENST00000567019 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
EPB42-206ENST00000567019 MYH14Q7Z406 1995 aaKnown RBP19.35■□□□□ 0.69
EPB42-206ENST00000567019 TAF1LQ8IZX4 1826 aa19.35■□□□□ 0.69
EPB42-206ENST00000567019 KCNQ4P56696 695 aa19.35■□□□□ 0.69
EPB42-206ENST00000567019 SLC27A3Q5K4L6 730 aa19.35■□□□□ 0.69
EPB42-206ENST00000567019 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
EPB42-206ENST00000567019 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
EPB42-206ENST00000567019 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
EPB42-206ENST00000567019 USP44Q9H0E7 712 aa19.34■□□□□ 0.69
EPB42-206ENST00000567019 C1orf115Q9H7X2 142 aa19.34■□□□□ 0.69
EPB42-206ENST00000567019 C9orf78Q9NZ63 289 aaPredicted RBP19.34■□□□□ 0.69
EPB42-206ENST00000567019 HDAC5Q9UQL6 1122 aa19.34■□□□□ 0.69
EPB42-206ENST00000567019 AFDNP55196 1824 aaKnown RBP19.34■□□□□ 0.69
EPB42-206ENST00000567019 MAP3K15Q6ZN16 1313 aa19.34■□□□□ 0.69
EPB42-206ENST00000567019 GNAI2P04899 355 aa19.33■□□□□ 0.69
EPB42-206ENST00000567019 UBTFL1P0CB47 393 aaPredicted RBP19.33■□□□□ 0.69
EPB42-206ENST00000567019 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.69
EPB42-206ENST00000567019 DZIP3Q86Y13 1208 aaKnown RBP19.33■□□□□ 0.69
EPB42-206ENST00000567019 IBTKQ9P2D0 1353 aaPredicted RBP19.33■□□□□ 0.69
EPB42-206ENST00000567019 A0A087WZG4 1122 aa19.33■□□□□ 0.68
EPB42-206ENST00000567019 APBA3O96018 575 aa19.33■□□□□ 0.68
EPB42-206ENST00000567019 NEURL1BA8MQ27 555 aa19.32■□□□□ 0.68
EPB42-206ENST00000567019 PLSCR1O15162 318 aa19.32■□□□□ 0.68
EPB42-206ENST00000567019 IGKV5-2P06315 115 aa19.32■□□□□ 0.68
EPB42-206ENST00000567019 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
EPB42-206ENST00000567019 HDAC1Q13547 482 aaPredicted RBP19.31■□□□□ 0.68
EPB42-206ENST00000567019 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
EPB42-206ENST00000567019 RPAP2Q8IXW5 612 aaPredicted RBP19.31■□□□□ 0.68
EPB42-206ENST00000567019 EP400Q96L91 3159 aa19.31■□□□□ 0.68
EPB42-206ENST00000567019 IGHDP01880 384 aa19.3■□□□□ 0.68
EPB42-206ENST00000567019 GCKRQ14397 625 aa19.3■□□□□ 0.68
EPB42-206ENST00000567019 GIGYF2Q6Y7W6 1299 aaKnown RBP19.3■□□□□ 0.68
EPB42-206ENST00000567019 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
EPB42-206ENST00000567019 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
EPB42-206ENST00000567019 COL15A1P39059 1388 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 C4BP0C0L5 1744 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 GRM8O00222 908 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 TCIRG1Q13488 830 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 GNPATO15228 680 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
EPB42-206ENST00000567019 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 AK7Q96M32 723 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 LRRC4BQ9NT99 713 aa19.29■□□□□ 0.68
EPB42-206ENST00000567019 CWC25Q9NXE8 425 aaPredicted RBP19.29■□□□□ 0.68
EPB42-206ENST00000567019 RTCBQ9Y3I0 505 aaKnown RBP19.29■□□□□ 0.68
EPB42-206ENST00000567019 NUP98P52948 1817 aa19.28■□□□□ 0.68
EPB42-206ENST00000567019 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
EPB42-206ENST00000567019 TXNRD1Q16881 649 aa19.28■□□□□ 0.68
EPB42-206ENST00000567019 ANKRD44Q8N8A2 993 aa19.28■□□□□ 0.68
EPB42-206ENST00000567019 LRRFIP2Q9Y608 721 aaKnown RBP19.28■□□□□ 0.68
EPB42-206ENST00000567019 UTYO14607 1347 aa19.28■□□□□ 0.68
EPB42-206ENST00000567019 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
EPB42-206ENST00000567019 ANKRD36CQ5JPF3 1778 aa19.27■□□□□ 0.68
EPB42-206ENST00000567019 HMMRO75330 724 aa19.26■□□□□ 0.67
EPB42-206ENST00000567019 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
EPB42-206ENST00000567019 HLFQ16534 295 aa19.26■□□□□ 0.67
EPB42-206ENST00000567019 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
EPB42-206ENST00000567019 RGPD3A6NKT7 1758 aaPredicted RBP19.26■□□□□ 0.67
EPB42-206ENST00000567019 RGPD4Q7Z3J3 1758 aa19.26■□□□□ 0.67
EPB42-206ENST00000567019 ZNF652Q9Y2D9 606 aa19.25■□□□□ 0.67
EPB42-206ENST00000567019 CAMTA2O94983 1202 aa19.25■□□□□ 0.67
EPB42-206ENST00000567019 TSHZ2Q9NRE2 1034 aa19.25■□□□□ 0.67
EPB42-206ENST00000567019 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
EPB42-206ENST00000567019 PROM2Q8N271 834 aa19.24■□□□□ 0.67
EPB42-206ENST00000567019 RGL2O15211 777 aa19.23■□□□□ 0.67
EPB42-206ENST00000567019 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
EPB42-206ENST00000567019 SF3B2Q13435 895 aaKnown RBP19.23■□□□□ 0.67
EPB42-206ENST00000567019 TRAPPC3LQ5T215 181 aa19.23■□□□□ 0.67
EPB42-206ENST00000567019 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
EPB42-206ENST00000567019 BCORQ6W2J9 1755 aa19.23■□□□□ 0.67
EPB42-206ENST00000567019 ZPR1O75312 459 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 ADRA2BP18089 450 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 GCC1Q96CN9 775 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 H7C1W4 665 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 GPTP24298 496 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 NARFQ9UHQ1 456 aa19.22■□□□□ 0.67
EPB42-206ENST00000567019 RFC4P35249 363 aa19.21■□□□□ 0.67
EPB42-206ENST00000567019 NLRP10Q86W26 655 aa19.21■□□□□ 0.67
EPB42-206ENST00000567019 ZNF34Q8IZ26 560 aa19.21■□□□□ 0.67
EPB42-206ENST00000567019 UBR3Q6ZT12 1888 aa19.2■□□□□ 0.66
EPB42-206ENST00000567019 SMC5Q8IY18 1101 aa19.2■□□□□ 0.66
EPB42-206ENST00000567019 ARHGEF1Q92888 912 aaKnown RBP19.2■□□□□ 0.66
EPB42-206ENST00000567019 SUCLG2Q96I99 432 aa19.2■□□□□ 0.66
EPB42-206ENST00000567019 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms