RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 NPHP1O15259 732 aa20.85■□□□□ 0.93
PALB2-205ENST00000567003 DPY19L2Q6NUT2 758 aa20.85■□□□□ 0.93
PALB2-205ENST00000567003 SETDB2Q96T68 719 aa20.85■□□□□ 0.93
PALB2-205ENST00000567003 TAOK3Q9H2K8 898 aa20.85■□□□□ 0.93
PALB2-205ENST00000567003 CEMIPQ8WUJ3 1361 aa20.85■□□□□ 0.93
PALB2-205ENST00000567003 DDNO94850 711 aaPredicted RBP20.84■□□□□ 0.93
PALB2-205ENST00000567003 PRPF40BQ6NWY9 871 aaKnown RBP20.84■□□□□ 0.93
PALB2-205ENST00000567003 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
PALB2-205ENST00000567003 BTBD11A6QL63 1104 aa20.83■□□□□ 0.93
PALB2-205ENST00000567003 ST5P78524 1137 aa20.83■□□□□ 0.93
PALB2-205ENST00000567003 DZIP3Q86Y13 1208 aaKnown RBP20.83■□□□□ 0.93
PALB2-205ENST00000567003 LTBP3Q9NS15 1303 aa20.82■□□□□ 0.92
PALB2-205ENST00000567003 SRGNP10124 158 aa20.82■□□□□ 0.92
PALB2-205ENST00000567003 PRKAR2BP31323 418 aa20.82■□□□□ 0.92
PALB2-205ENST00000567003 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
PALB2-205ENST00000567003 STYK1Q6J9G0 422 aa20.81■□□□□ 0.92
PALB2-205ENST00000567003 CHADLQ6NUI6 762 aa20.81■□□□□ 0.92
PALB2-205ENST00000567003 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
PALB2-205ENST00000567003 CNKSR1Q969H4 720 aa20.81■□□□□ 0.92
PALB2-205ENST00000567003 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
PALB2-205ENST00000567003 MKRN1Q9UHC7 482 aaKnown RBP20.81■□□□□ 0.92
PALB2-205ENST00000567003 MASTLQ96GX5 879 aa20.8■□□□□ 0.92
PALB2-205ENST00000567003 NPC1L1Q9UHC9 1359 aa20.8■□□□□ 0.92
PALB2-205ENST00000567003 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
PALB2-205ENST00000567003 MCM10Q7L590 875 aa20.78■□□□□ 0.92
PALB2-205ENST00000567003 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
PALB2-205ENST00000567003 FAM177BA6PVY3 158 aa20.77■□□□□ 0.92
PALB2-205ENST00000567003 DCTN1Q14203 1278 aa20.76■□□□□ 0.91
PALB2-205ENST00000567003 C7orf43Q8WVR3 580 aa20.76■□□□□ 0.91
PALB2-205ENST00000567003 CREBZFQ9NS37 354 aa20.76■□□□□ 0.91
PALB2-205ENST00000567003 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
PALB2-205ENST00000567003 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
PALB2-205ENST00000567003 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
PALB2-205ENST00000567003 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
PALB2-205ENST00000567003 ZNF277Q9NRM2 450 aaPredicted RBP20.75■□□□□ 0.91
PALB2-205ENST00000567003 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
PALB2-205ENST00000567003 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
PALB2-205ENST00000567003 SCN4AP35499 1836 aa20.74■□□□□ 0.91
PALB2-205ENST00000567003 SNRPA1P09661 255 aaKnown RBP20.73■□□□□ 0.91
PALB2-205ENST00000567003 TAF1DQ9H5J8 278 aaPredicted RBP20.73■□□□□ 0.91
PALB2-205ENST00000567003 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
PALB2-205ENST00000567003 NPR1P16066 1061 aa20.72■□□□□ 0.91
PALB2-205ENST00000567003 EAPPQ56P03 285 aaPredicted RBP20.72■□□□□ 0.91
PALB2-205ENST00000567003 CLEC4GQ6UXB4 293 aa20.72■□□□□ 0.91
PALB2-205ENST00000567003 L3MBTL3Q96JM7 780 aaPredicted RBP20.72■□□□□ 0.91
PALB2-205ENST00000567003 CFAP53Q96M91 514 aa20.72■□□□□ 0.91
PALB2-205ENST00000567003 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
PALB2-205ENST00000567003 PASKQ96RG2 1323 aa20.72■□□□□ 0.91
PALB2-205ENST00000567003 CNTNAP1P78357 1384 aa20.72■□□□□ 0.91
PALB2-205ENST00000567003 U2AF1L5P0DN76 240 aaPredicted RBP20.71■□□□□ 0.91
PALB2-205ENST00000567003 U2AF1Q01081 240 aaKnown RBP eCLIP20.71■□□□□ 0.91
PALB2-205ENST00000567003 FKBP4Q02790 459 aaKnown RBP eCLIP20.71■□□□□ 0.91
PALB2-205ENST00000567003 HLFQ16534 295 aa20.71■□□□□ 0.91
PALB2-205ENST00000567003 LDHDQ86WU2 507 aa20.71■□□□□ 0.91
PALB2-205ENST00000567003 RTF1Q92541 710 aaKnown RBP20.71■□□□□ 0.91
PALB2-205ENST00000567003 IQCA1LA6NCM1 817 aa20.7■□□□□ 0.9
PALB2-205ENST00000567003 FOXN1O15353 648 aa20.7■□□□□ 0.9
PALB2-205ENST00000567003 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
PALB2-205ENST00000567003 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
PALB2-205ENST00000567003 LAMB4A4D0S4 1761 aa20.69■□□□□ 0.9
PALB2-205ENST00000567003 ADAMTSL1Q8N6G6 1762 aa20.68■□□□□ 0.9
PALB2-205ENST00000567003 TPTE2Q6XPS3 522 aa20.68■□□□□ 0.9
PALB2-205ENST00000567003 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
PALB2-205ENST00000567003 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
PALB2-205ENST00000567003 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
PALB2-205ENST00000567003 SLC51AQ86UW1 340 aa20.67■□□□□ 0.9
PALB2-205ENST00000567003 NGEFQ8N5V2 710 aa20.67■□□□□ 0.9
PALB2-205ENST00000567003 CLEC11AQ9Y240 323 aa20.67■□□□□ 0.9
PALB2-205ENST00000567003 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
PALB2-205ENST00000567003 ITGBL1O95965 494 aaPredicted RBP20.66■□□□□ 0.9
PALB2-205ENST00000567003 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
PALB2-205ENST00000567003 VEGFBP49765 207 aa20.66■□□□□ 0.9
PALB2-205ENST00000567003 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
PALB2-205ENST00000567003 HACL1Q9UJ83 578 aa20.66■□□□□ 0.9
PALB2-205ENST00000567003 COL4A5P29400 1685 aa20.65■□□□□ 0.9
PALB2-205ENST00000567003 EPHX2P34913 555 aa20.65■□□□□ 0.9
PALB2-205ENST00000567003 NUTM1Q86Y26 1132 aa20.65■□□□□ 0.9
PALB2-205ENST00000567003 RTKN2Q8IZC4 609 aa20.65■□□□□ 0.9
PALB2-205ENST00000567003 NUP98P52948 1817 aa20.64■□□□□ 0.9
PALB2-205ENST00000567003 SNED1Q8TER0 1413 aa20.64■□□□□ 0.89
PALB2-205ENST00000567003 TMEM88BA6NKF7 163 aa20.64■□□□□ 0.89
PALB2-205ENST00000567003 GTF2E1P29083 439 aaPredicted RBP20.64■□□□□ 0.89
PALB2-205ENST00000567003 MAP1SQ66K74 1059 aaPredicted RBP20.64■□□□□ 0.89
PALB2-205ENST00000567003 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.89
PALB2-205ENST00000567003 KDM3BQ7LBC6 1761 aa20.63■□□□□ 0.89
PALB2-205ENST00000567003 LTBP1Q14766 1721 aa20.62■□□□□ 0.89
PALB2-205ENST00000567003 FZD9O00144 591 aa20.62■□□□□ 0.89
PALB2-205ENST00000567003 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
PALB2-205ENST00000567003 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
PALB2-205ENST00000567003 TTLL7Q6ZT98 887 aa20.61■□□□□ 0.89
PALB2-205ENST00000567003 RGL2O15211 777 aa20.6■□□□□ 0.89
PALB2-205ENST00000567003 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
PALB2-205ENST00000567003 GPTP24298 496 aa20.6■□□□□ 0.89
PALB2-205ENST00000567003 CNTROBQ8N137 903 aa20.6■□□□□ 0.89
PALB2-205ENST00000567003 AIDAQ96BJ3 306 aa20.6■□□□□ 0.89
PALB2-205ENST00000567003 RRP7AQ9Y3A4 280 aaKnown RBP20.6■□□□□ 0.89
PALB2-205ENST00000567003 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
PALB2-205ENST00000567003 CRY2Q49AN0 593 aa20.59■□□□□ 0.89
PALB2-205ENST00000567003 THUMPD2Q9BTF0 503 aaKnown RBP20.59■□□□□ 0.89
PALB2-205ENST00000567003 MAP3K15Q6ZN16 1313 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms