RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
SMPD3-208ENST00000566723 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
SMPD3-208ENST00000566723 NPHP1O15259 732 aa20.1■□□□□ 0.81
SMPD3-208ENST00000566723 ST5P78524 1137 aa20.1■□□□□ 0.81
SMPD3-208ENST00000566723 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
SMPD3-208ENST00000566723 KDM2BQ8NHM5 1336 aa20.09■□□□□ 0.81
SMPD3-208ENST00000566723 RGL2O15211 777 aa20.09■□□□□ 0.81
SMPD3-208ENST00000566723 LMNB1P20700 586 aa20.09■□□□□ 0.81
SMPD3-208ENST00000566723 TOMM70O94826 608 aa20.08■□□□□ 0.81
SMPD3-208ENST00000566723 ZNF622Q969S3 477 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMPD3-208ENST00000566723 THUMPD2Q9BTF0 503 aaKnown RBP20.08■□□□□ 0.81
SMPD3-208ENST00000566723 NFKBIEO00221 500 aa20.06■□□□□ 0.8
SMPD3-208ENST00000566723 PRELPP51888 382 aa20.06■□□□□ 0.8
SMPD3-208ENST00000566723 NBPF5PQ86XG9 351 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-208ENST00000566723 EIF4A1P60842 406 aaKnown RBP20.05■□□□□ 0.8
SMPD3-208ENST00000566723 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
SMPD3-208ENST00000566723 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
SMPD3-208ENST00000566723 SRGNP10124 158 aa20.04■□□□□ 0.8
SMPD3-208ENST00000566723 STYK1Q6J9G0 422 aa20.04■□□□□ 0.8
SMPD3-208ENST00000566723 CNKSR1Q969H4 720 aa20.04■□□□□ 0.8
SMPD3-208ENST00000566723 NIP7Q9Y221 180 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMPD3-208ENST00000566723 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
SMPD3-208ENST00000566723 C21orf2O43822 256 aa20.03■□□□□ 0.8
SMPD3-208ENST00000566723 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-208ENST00000566723 RBM46Q8TBY0 533 aaKnown RBP20.03■□□□□ 0.8
SMPD3-208ENST00000566723 MASTLQ96GX5 879 aa20.03■□□□□ 0.8
SMPD3-208ENST00000566723 HLFQ16534 295 aa20.01■□□□□ 0.79
SMPD3-208ENST00000566723 PRPF40BQ6NWY9 871 aaKnown RBP20.01■□□□□ 0.79
SMPD3-208ENST00000566723 ZNF219Q9P2Y4 722 aaPredicted RBP20.01■□□□□ 0.79
SMPD3-208ENST00000566723 LTBP3Q9NS15 1303 aa20.01■□□□□ 0.79
SMPD3-208ENST00000566723 RIPK4P57078 832 aa20■□□□□ 0.79
SMPD3-208ENST00000566723 LMOD3Q0VAK6 560 aa20■□□□□ 0.79
SMPD3-208ENST00000566723 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
SMPD3-208ENST00000566723 RRAGCQ9HB90 399 aa20■□□□□ 0.79
SMPD3-208ENST00000566723 TSPYL4Q9UJ04 414 aa20■□□□□ 0.79
SMPD3-208ENST00000566723 MAP3K15Q6ZN16 1313 aa20■□□□□ 0.79
SMPD3-208ENST00000566723 GLTPD2A6NH11 291 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
SMPD3-208ENST00000566723 APLP1P51693 650 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 SOGA3Q5TF21 947 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 TAOK3Q9H2K8 898 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 ERBB4Q15303 1308 aa19.99■□□□□ 0.79
SMPD3-208ENST00000566723 KLRG2A4D1S0 409 aaPredicted RBP19.98■□□□□ 0.79
SMPD3-208ENST00000566723 KIF6Q6ZMV9 814 aa19.98■□□□□ 0.79
SMPD3-208ENST00000566723 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
SMPD3-208ENST00000566723 ANKRD36CQ5JPF3 1778 aa19.98■□□□□ 0.79
SMPD3-208ENST00000566723 FAM177BA6PVY3 158 aa19.97■□□□□ 0.79
SMPD3-208ENST00000566723 MYL6BP14649 208 aa19.97■□□□□ 0.79
SMPD3-208ENST00000566723 NPR1P16066 1061 aa19.97■□□□□ 0.79
SMPD3-208ENST00000566723 FSTL1Q12841 308 aa19.97■□□□□ 0.79
SMPD3-208ENST00000566723 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
SMPD3-208ENST00000566723 BABAM1Q9NWV8 329 aa19.97■□□□□ 0.79
SMPD3-208ENST00000566723 ABCC12Q96J65 1359 aa19.96■□□□□ 0.79
SMPD3-208ENST00000566723 IBTKQ9P2D0 1353 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-208ENST00000566723 NYXQ9GZU5 481 aa19.96■□□□□ 0.79
SMPD3-208ENST00000566723 ERFEQ4G0M1 354 aa19.95■□□□□ 0.78
SMPD3-208ENST00000566723 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
SMPD3-208ENST00000566723 RIC1Q4ADV7 1423 aa19.94■□□□□ 0.78
SMPD3-208ENST00000566723 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
SMPD3-208ENST00000566723 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMPD3-208ENST00000566723 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
SMPD3-208ENST00000566723 C7orf43Q8WVR3 580 aa19.94■□□□□ 0.78
SMPD3-208ENST00000566723 ZBTB3Q9H5J0 574 aa19.94■□□□□ 0.78
SMPD3-208ENST00000566723 VEGFAP15692 232 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-208ENST00000566723 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
SMPD3-208ENST00000566723 DPY19L2Q6NUT2 758 aa19.92■□□□□ 0.78
SMPD3-208ENST00000566723 LRP10Q7Z4F1 713 aa19.92■□□□□ 0.78
SMPD3-208ENST00000566723 NUTM1Q86Y26 1132 aa19.92■□□□□ 0.78
SMPD3-208ENST00000566723 SMC1BQ8NDV3 1235 aa19.92■□□□□ 0.78
SMPD3-208ENST00000566723 RUNDC1Q96C34 613 aa19.92■□□□□ 0.78
SMPD3-208ENST00000566723 EIF2S2P20042 333 aaKnown RBP19.91■□□□□ 0.78
SMPD3-208ENST00000566723 GPTP24298 496 aa19.91■□□□□ 0.78
SMPD3-208ENST00000566723 NEUROD2Q15784 382 aa19.91■□□□□ 0.78
SMPD3-208ENST00000566723 CRY2Q49AN0 593 aa19.91■□□□□ 0.78
SMPD3-208ENST00000566723 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
SMPD3-208ENST00000566723 ALDH1B1P30837 517 aa19.9■□□□□ 0.78
SMPD3-208ENST00000566723 PDIA6Q15084 440 aa19.9■□□□□ 0.78
SMPD3-208ENST00000566723 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
SMPD3-208ENST00000566723 PRKRIP1Q9H875 184 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-208ENST00000566723 SCN4AP35499 1836 aa19.9■□□□□ 0.78
SMPD3-208ENST00000566723 LAMB2P55268 1798 aa19.89■□□□□ 0.77
SMPD3-208ENST00000566723 FKBP4Q02790 459 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMPD3-208ENST00000566723 PROSER3Q2NL68 480 aa19.89■□□□□ 0.77
SMPD3-208ENST00000566723 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
SMPD3-208ENST00000566723 TRIM35Q9UPQ4 493 aa19.89■□□□□ 0.77
SMPD3-208ENST00000566723 SNED1Q8TER0 1413 aa19.88■□□□□ 0.77
SMPD3-208ENST00000566723 POTECB2RU33 542 aa19.88■□□□□ 0.77
SMPD3-208ENST00000566723 NTSR2O95665 410 aa19.88■□□□□ 0.77
SMPD3-208ENST00000566723 SUSD4Q5VX71 490 aa19.88■□□□□ 0.77
SMPD3-208ENST00000566723 CHL1O00533 1208 aa19.87■□□□□ 0.77
SMPD3-208ENST00000566723 ANXA1P04083 346 aa19.87■□□□□ 0.77
SMPD3-208ENST00000566723 PARP10Q53GL7 1025 aa19.87■□□□□ 0.77
SMPD3-208ENST00000566723 OLFM4Q6UX06 510 aa19.87■□□□□ 0.77
SMPD3-208ENST00000566723 RTKN2Q8IZC4 609 aa19.87■□□□□ 0.77
SMPD3-208ENST00000566723 DNAJC5GQ8N7S2 189 aa19.87■□□□□ 0.77
SMPD3-208ENST00000566723 PPP1R42Q7Z4L9 355 aa19.86■□□□□ 0.77
SMPD3-208ENST00000566723 RPGRQ92834 1020 aaKnown RBP19.86■□□□□ 0.77
SMPD3-208ENST00000566723 ZNF277Q9NRM2 450 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms