RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ERVV-1B6SEH8 477 aa33.68■■■□□ 2.98
NME3-209ENST00000566600 ANXA1P04083 346 aa33.68■■■□□ 2.98
NME3-209ENST00000566600 SLFN5Q08AF3 891 aa33.67■■■□□ 2.98
NME3-209ENST00000566600 MAP3K15Q6ZN16 1313 aa33.67■■■□□ 2.98
NME3-209ENST00000566600 NFIXQ14938 502 aa33.66■■■□□ 2.98
NME3-209ENST00000566600 TTLL7Q6ZT98 887 aa33.66■■■□□ 2.98
NME3-209ENST00000566600 FHDC1Q9C0D6 1143 aaPredicted RBP33.66■■■□□ 2.98
NME3-209ENST00000566600 COPS6Q7L5N1 327 aa33.64■■■□□ 2.98
NME3-209ENST00000566600 XAGE3Q8WTP9 111 aa33.64■■■□□ 2.98
NME3-209ENST00000566600 STK31Q9BXU1 1019 aa33.64■■■□□ 2.98
NME3-209ENST00000566600 POLRMTO00411 1230 aaKnown RBP33.63■■■□□ 2.97
NME3-209ENST00000566600 DDR1Q08345 913 aa33.63■■■□□ 2.97
NME3-209ENST00000566600 TBC1D9BQ66K14 1250 aa33.63■■■□□ 2.97
NME3-209ENST00000566600 KLHL34Q8N239 644 aa33.63■■■□□ 2.97
NME3-209ENST00000566600 SETDB2Q96T68 719 aa33.63■■■□□ 2.97
NME3-209ENST00000566600 CD2APQ9Y5K6 639 aa33.63■■■□□ 2.97
NME3-209ENST00000566600 VAMP4O75379 141 aa33.62■■■□□ 2.97
NME3-209ENST00000566600 BICDL1Q6ZP65 573 aa33.62■■■□□ 2.97
NME3-209ENST00000566600 AIMP1Q12904 312 aaKnown RBP33.61■■■□□ 2.97
NME3-209ENST00000566600 SYT17Q9BSW7 474 aa33.61■■■□□ 2.97
NME3-209ENST00000566600 CDCA7LQ96GN5 454 aa33.6■■■□□ 2.97
NME3-209ENST00000566600 ZBTB3Q9H5J0 574 aa33.6■■■□□ 2.97
NME3-209ENST00000566600 CARMIL3Q8ND23 1372 aa33.6■■■□□ 2.97
NME3-209ENST00000566600 HLFQ16534 295 aa33.59■■■□□ 2.97
NME3-209ENST00000566600 SERPINB2P05120 415 aa33.58■■■□□ 2.97
NME3-209ENST00000566600 TRMT2AQ8IZ69 625 aaKnown RBP33.58■■■□□ 2.97
NME3-209ENST00000566600 GIGYF2Q6Y7W6 1299 aaKnown RBP33.57■■■□□ 2.96
NME3-209ENST00000566600 NUP98P52948 1817 aa33.56■■■□□ 2.96
NME3-209ENST00000566600 NIP7Q9Y221 180 aaKnown RBP eCLIP33.56■■■□□ 2.96
NME3-209ENST00000566600 ATP10DQ9P241 1426 aa33.55■■■□□ 2.96
NME3-209ENST00000566600 ANKRD13DQ6ZTN6 518 aa33.55■■■□□ 2.96
NME3-209ENST00000566600 PLBD2Q8NHP8 589 aa33.55■■■□□ 2.96
NME3-209ENST00000566600 C10orf71Q711Q0 1435 aa33.54■■■□□ 2.96
NME3-209ENST00000566600 HSP90AB3PQ58FF7 597 aa33.54■■■□□ 2.96
NME3-209ENST00000566600 ZBED9Q6R2W3 1325 aa33.53■■■□□ 2.96
NME3-209ENST00000566600 SLC4A2P04920 1241 aa33.53■■■□□ 2.96
NME3-209ENST00000566600 PHAXQ9H814 394 aaKnown RBP33.53■■■□□ 2.96
NME3-209ENST00000566600 NRXN2Q9P2S2 1712 aa33.53■■■□□ 2.96
NME3-209ENST00000566600 DDX58O95786 925 aaKnown RBP33.52■■■□□ 2.96
NME3-209ENST00000566600 AFDNP55196 1824 aaKnown RBP33.51■■■□□ 2.96
NME3-209ENST00000566600 CACNA1FO60840 1977 aa33.51■■■□□ 2.96
NME3-209ENST00000566600 TCERG1O14776 1098 aaKnown RBP33.51■■■□□ 2.95
NME3-209ENST00000566600 KIF13BQ9NQT8 1826 aa33.51■■■□□ 2.95
NME3-209ENST00000566600 NBPF5PQ86XG9 351 aaPredicted RBP33.5■■■□□ 2.95
NME3-209ENST00000566600 ZNF428Q96B54 188 aa33.5■■■□□ 2.95
NME3-209ENST00000566600 NPHP1O15259 732 aa33.49■■■□□ 2.95
NME3-209ENST00000566600 CT47B1P0C2W7 299 aaPredicted RBP33.49■■■□□ 2.95
NME3-209ENST00000566600 ZNF34Q8IZ26 560 aa33.49■■■□□ 2.95
NME3-209ENST00000566600 TGFB2P61812 414 aa33.48■■■□□ 2.95
NME3-209ENST00000566600 TPTE2Q6XPS3 522 aa33.48■■■□□ 2.95
NME3-209ENST00000566600 RIC3Q7Z5B4 369 aa33.48■■■□□ 2.95
NME3-209ENST00000566600 CNBD1Q8NA66 436 aa33.48■■■□□ 2.95
NME3-209ENST00000566600 NLGN2Q8NFZ4 835 aa33.48■■■□□ 2.95
NME3-209ENST00000566600 TCIRG1Q13488 830 aa33.47■■■□□ 2.95
NME3-209ENST00000566600 PARP10Q53GL7 1025 aa33.47■■■□□ 2.95
NME3-209ENST00000566600 NYXQ9GZU5 481 aa33.47■■■□□ 2.95
NME3-209ENST00000566600 GPTP24298 496 aa33.46■■■□□ 2.95
NME3-209ENST00000566600 PRR5LQ6MZQ0 368 aa33.46■■■□□ 2.95
NME3-209ENST00000566600 ST5P78524 1137 aa33.45■■■□□ 2.95
NME3-209ENST00000566600 IBTKQ9P2D0 1353 aaPredicted RBP33.45■■■□□ 2.94
NME3-209ENST00000566600 ANKRD36CQ5JPF3 1778 aa33.44■■■□□ 2.94
NME3-209ENST00000566600 FLIIQ13045 1269 aa33.43■■■□□ 2.94
NME3-209ENST00000566600 PPP1R42Q7Z4L9 355 aa33.43■■■□□ 2.94
NME3-209ENST00000566600 DCAF8L1A6NGE4 600 aa33.42■■■□□ 2.94
NME3-209ENST00000566600 KSR2Q6VAB6 950 aa33.42■■■□□ 2.94
NME3-209ENST00000566600 G2E3Q7L622 706 aa33.42■■■□□ 2.94
NME3-209ENST00000566600 UBN2Q6ZU65 1347 aa33.42■■■□□ 2.94
NME3-209ENST00000566600 ARFGEF2Q9Y6D5 1785 aa33.42■■■□□ 2.94
NME3-209ENST00000566600 FAM177BA6PVY3 158 aa33.41■■■□□ 2.94
NME3-209ENST00000566600 GTF2E1P29083 439 aaPredicted RBP33.41■■■□□ 2.94
NME3-209ENST00000566600 BRIP1Q9BX63 1249 aa33.41■■■□□ 2.94
NME3-209ENST00000566600 PDZRN3Q9UPQ7 1066 aa33.41■■■□□ 2.94
NME3-209ENST00000566600 PXDNLA1KZ92 1463 aa33.4■■■□□ 2.94
NME3-209ENST00000566600 PDE6BP35913 854 aa33.39■■■□□ 2.94
NME3-209ENST00000566600 FKBP5Q13451 457 aaPredicted RBP33.39■■■□□ 2.94
NME3-209ENST00000566600 SUSD4Q5VX71 490 aa33.39■■■□□ 2.94
NME3-209ENST00000566600 RNF123Q5XPI4 1314 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 PI4KAP2A4QPH2 592 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 ALDH1L2Q3SY69 923 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 NLRP10Q86W26 655 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 PI4KAP1Q8N8J0 262 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 ISCA1Q9BUE6 129 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 UTP14AQ9BVJ6 771 aaKnown RBP33.38■■■□□ 2.93
NME3-209ENST00000566600 MAP3K2Q9Y2U5 619 aa33.38■■■□□ 2.93
NME3-209ENST00000566600 TRIM28Q13263 835 aaKnown RBP33.37■■■□□ 2.93
NME3-209ENST00000566600 METTL22Q9BUU2 404 aaPredicted RBP33.37■■■□□ 2.93
NME3-209ENST00000566600 A0A0G2JLW4 131 aa33.36■■■□□ 2.93
NME3-209ENST00000566600 DPEP1P16444 411 aa33.36■■■□□ 2.93
NME3-209ENST00000566600 KIAA1551Q9HCM1 1747 aa33.36■■■□□ 2.93
NME3-209ENST00000566600 ADCY9O60503 1353 aa33.35■■■□□ 2.93
NME3-209ENST00000566600 NTSR2O95665 410 aa33.35■■■□□ 2.93
NME3-209ENST00000566600 NEXNQ0ZGT2 675 aa33.35■■■□□ 2.93
NME3-209ENST00000566600 CCDC24Q8N4L8 307 aa33.35■■■□□ 2.93
NME3-209ENST00000566600 MYD88Q99836 296 aa33.35■■■□□ 2.93
NME3-209ENST00000566600 ATP5J2-PTCD1G3V325 749 aa33.34■■■□□ 2.93
NME3-209ENST00000566600 H0YIN7 160 aa33.34■■■□□ 2.93
NME3-209ENST00000566600 SSH1Q8WYL5 1049 aa33.34■■■□□ 2.93
NME3-209ENST00000566600 N4BP2Q86UW6 1770 aaPredicted RBP33.34■■■□□ 2.93
NME3-209ENST00000566600 MRPL50Q8N5N7 158 aaKnown RBP33.33■■■□□ 2.93
NME3-209ENST00000566600 NUTM1Q86Y26 1132 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms