RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 ARAFP10398 606 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 CD33P20138 364 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 DPYDQ12882 1025 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 EDARADDQ8WWZ3 215 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
CCP110-208ENST00000566523 PPP1R12BO60237 982 aaPredicted RBP12.38□□□□□ -0.43
CCP110-208ENST00000566523 KANK3Q6NY19 840 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 LRRC69Q6ZNQ3 347 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 SLCO4C1Q6ZQN7 724 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 HCN4Q9Y3Q4 1203 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
CCP110-208ENST00000566523 LAMC2Q13753 1193 aa12.37□□□□□ -0.43
CCP110-208ENST00000566523 ANKMY2Q8IV38 441 aa12.37□□□□□ -0.43
CCP110-208ENST00000566523 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
CCP110-208ENST00000566523 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
CCP110-208ENST00000566523 PHACTR1Q9C0D0 580 aa12.37□□□□□ -0.43
CCP110-208ENST00000566523 DNMT3AQ9Y6K1 912 aaPredicted RBP12.37□□□□□ -0.43
CCP110-208ENST00000566523 C2orf49Q9BVC5 232 aaPredicted RBP12.36□□□□□ -0.43
CCP110-208ENST00000566523 MARK1Q9P0L2 795 aa12.36□□□□□ -0.43
CCP110-208ENST00000566523 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
CCP110-208ENST00000566523 SCG3Q8WXD2 468 aaKnown RBP12.35□□□□□ -0.43
CCP110-208ENST00000566523 ARXQ96QS3 562 aa12.35□□□□□ -0.43
CCP110-208ENST00000566523 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
CCP110-208ENST00000566523 KCTD17Q8N5Z5 321 aa12.34□□□□□ -0.43
CCP110-208ENST00000566523 AVENQ9NQS1 362 aaPredicted RBP12.34□□□□□ -0.43
CCP110-208ENST00000566523 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
CCP110-208ENST00000566523 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
CCP110-208ENST00000566523 EPXP11678 715 aa12.33□□□□□ -0.44
CCP110-208ENST00000566523 SNRPNP63162 240 aaKnown RBP12.33□□□□□ -0.44
CCP110-208ENST00000566523 HINFPQ9BQA5 517 aa12.33□□□□□ -0.44
CCP110-208ENST00000566523 NEUROD4Q9HD90 331 aa12.33□□□□□ -0.44
CCP110-208ENST00000566523 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
CCP110-208ENST00000566523 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
CCP110-208ENST00000566523 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
CCP110-208ENST00000566523 ZNF468Q5VIY5 522 aaPredicted RBP12.31□□□□□ -0.44
CCP110-208ENST00000566523 HSH2DQ96JZ2 352 aa12.31□□□□□ -0.44
CCP110-208ENST00000566523 LGR5O75473 907 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 ADH6P28332 368 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 FCHSD1Q86WN1 690 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
CCP110-208ENST00000566523 BTBD6Q96KE9 485 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 SUSD3Q96L08 255 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 ZMYND15Q9H091 742 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
CCP110-208ENST00000566523 IGFBP4P22692 258 aa12.29□□□□□ -0.44
CCP110-208ENST00000566523 SFSWAPQ12872 951 aaKnown RBP12.29□□□□□ -0.44
CCP110-208ENST00000566523 GRIN2CQ14957 1233 aa12.29□□□□□ -0.44
CCP110-208ENST00000566523 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
CCP110-208ENST00000566523 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
CCP110-208ENST00000566523 PCBP4P57723 403 aaKnown RBP12.27□□□□□ -0.45
CCP110-208ENST00000566523 RFX1P22670 979 aa12.26□□□□□ -0.45
CCP110-208ENST00000566523 LINC00114Q6XXX2 140 aa12.26□□□□□ -0.45
CCP110-208ENST00000566523 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
CCP110-208ENST00000566523 MKL2Q9ULH7 1088 aa12.26□□□□□ -0.45
CCP110-208ENST00000566523 WEE1P30291 646 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 KCNQ4P56696 695 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 TYRO3Q06418 890 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 DCAF5Q96JK2 942 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 CEP63Q96MT8 703 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 SLC30A3Q99726 388 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 BRD7Q9NPI1 651 aa12.25□□□□□ -0.45
CCP110-208ENST00000566523 AMPD1P23109 780 aa12.24□□□□□ -0.45
CCP110-208ENST00000566523 MDFIQ99750 246 aa12.24□□□□□ -0.45
CCP110-208ENST00000566523 SRPK2P78362 688 aaKnown RBP12.23□□□□□ -0.45
CCP110-208ENST00000566523 RTN1Q16799 776 aa12.23□□□□□ -0.45
CCP110-208ENST00000566523 CHSY3Q70JA7 882 aa12.23□□□□□ -0.45
CCP110-208ENST00000566523 SYT9Q86SS6 491 aa12.23□□□□□ -0.45
CCP110-208ENST00000566523 DGKGP49619 791 aa12.22□□□□□ -0.45
CCP110-208ENST00000566523 HIF1AQ16665 826 aa12.22□□□□□ -0.45
CCP110-208ENST00000566523 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
CCP110-208ENST00000566523 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
CCP110-208ENST00000566523 BTLAQ7Z6A9 289 aa12.21□□□□□ -0.45
CCP110-208ENST00000566523 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.45
CCP110-208ENST00000566523 FOXO3O43524 673 aa12.2□□□□□ -0.46
CCP110-208ENST00000566523 SIN3BO75182 1162 aa12.2□□□□□ -0.46
CCP110-208ENST00000566523 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
CCP110-208ENST00000566523 IER5Q5VY09 327 aa12.2□□□□□ -0.46
CCP110-208ENST00000566523 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
CCP110-208ENST00000566523 ELOAQ14241 798 aaKnown RBP12.19□□□□□ -0.46
CCP110-208ENST00000566523 DMGDHQ9UI17 866 aaKnown RBP12.19□□□□□ -0.46
CCP110-208ENST00000566523 ZMIZ1Q9ULJ6 1067 aa12.19□□□□□ -0.46
CCP110-208ENST00000566523 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
CCP110-208ENST00000566523 ELOA3DA6NLF2 546 aaPredicted RBP12.18□□□□□ -0.46
CCP110-208ENST00000566523 ITGB2P05107 769 aa12.18□□□□□ -0.46
CCP110-208ENST00000566523 COL8A1P27658 744 aa12.18□□□□□ -0.46
CCP110-208ENST00000566523 ELOA3BQ3SY89 546 aa12.18□□□□□ -0.46
CCP110-208ENST00000566523 ELOA3Q8NG57 546 aa12.18□□□□□ -0.46
CCP110-208ENST00000566523 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms