RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 ATXN7O15265 892 aaPredicted RBP6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 LZTS3O60299 673 aaPredicted RBP6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 PRSS36Q5K4E3 855 aa6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 ARID3AQ99856 593 aa6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 NOD1Q9Y239 953 aa6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 PCDHGA11Q9Y5H2 935 aa6.35□□□□□ -1.39
CNEP1R1-207ENST00000566093 BTBD11A6QL63 1104 aa6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 ZBTB7BO15156 539 aaPredicted RBP6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 CD33P20138 364 aa6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 C1orf216Q8TAB5 229 aa6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 SIRT1Q96EB6 747 aa6.34□□□□□ -1.39
CNEP1R1-207ENST00000566093 GTF2E1P29083 439 aaPredicted RBP6.33□□□□□ -1.4
CNEP1R1-207ENST00000566093 PCBP4P57723 403 aaKnown RBP6.33□□□□□ -1.4
CNEP1R1-207ENST00000566093 GTF2IP78347 998 aa6.33□□□□□ -1.4
CNEP1R1-207ENST00000566093 CLDN10P78369 228 aa6.33□□□□□ -1.4
CNEP1R1-207ENST00000566093 ESCO1Q5FWF5 840 aa6.33□□□□□ -1.4
CNEP1R1-207ENST00000566093 VRTNQ9H8Y1 702 aa6.33□□□□□ -1.4
CNEP1R1-207ENST00000566093 DCDC2BA2VCK2 349 aa6.32□□□□□ -1.4
CNEP1R1-207ENST00000566093 PLA2G4AP47712 749 aa6.32□□□□□ -1.4
CNEP1R1-207ENST00000566093 OGFOD1Q8N543 542 aa6.32□□□□□ -1.4
CNEP1R1-207ENST00000566093 STRN4Q9NRL3 753 aa6.32□□□□□ -1.4
CNEP1R1-207ENST00000566093 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 ELOA3CA0A087WX78 387 aaPredicted RBP6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 ELOA3DA6NLF2 546 aaPredicted RBP6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 EFSO43281 561 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 FAM157BP0CG42 384 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 RASA1P20936 1047 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 SCNN1DP51172 638 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 SRPK2P78362 688 aaKnown RBP6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 TLR1Q15399 786 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 ELOA3BQ3SY89 546 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 ELOA3Q8NG57 546 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 GOLGA2P5Q9HBQ8 144 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 KIAA1024Q9UPX6 916 aa6.31□□□□□ -1.4
CNEP1R1-207ENST00000566093 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 TMEM229AB2RXF0 380 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 HYAL3O43820 417 aaPredicted RBP6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 GDF10P55107 478 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 PSME1Q06323 249 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 ZIC5Q96T25 663 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 SERTAD1Q9UHV2 236 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 STARD13Q9Y3M8 1113 aa6.3□□□□□ -1.4
CNEP1R1-207ENST00000566093 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 KHNYNO15037 678 aaKnown RBP6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 H2AFB1P0C5Y9 115 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 H2AFB2P0C5Z0 115 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 ATP1A2P50993 1020 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 LRP8Q14114 963 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 CRTC2Q53ET0 693 aaPredicted RBP6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 CCDC102BQ68D86 513 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 LARP1Q6PKG0 1096 aaKnown RBP6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 NBPF11Q86T75 865 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 TPCN2Q8NHX9 752 aa6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 IQSEC3Q9UPP2 1182 aaPredicted RBP6.29□□□□□ -1.4
CNEP1R1-207ENST00000566093 ADARB2-AS1A8MUL3 147 aa6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 APBA3O96018 575 aa6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 INHAP05111 366 aa6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 PTK7Q13308 1070 aa6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 PRRT3Q5FWE3 981 aa6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
CNEP1R1-207ENST00000566093 SPDYE3A6NKU9 549 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 SFI1A8K8P3 1242 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 DKK1O94907 266 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 LAMC2Q13753 1193 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 GRIK4Q16099 956 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 ZNF358Q9NW07 568 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 MARK1Q9P0L2 795 aa6.27□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L15C9J2P7 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L10C9JJH3 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L13C9JLJ4 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L12C9JPN9 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L11C9JVI0 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L21D6R901 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L18D6R9N7 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L22D6RA61 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L17D6RBQ6 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L19D6RCP7 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L20D6RJB6 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 LGR5O75473 907 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 NID1P14543 1247 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 SMTNP53814 917 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP17L24Q0WX57 530 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 DPYDQ12882 1025 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 ADGRE1Q14246 886 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 C8orf86Q6ZUL3 223 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 PBXIP1Q96AQ6 731 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 AIDAQ96BJ3 306 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 ZDHHC3Q9NYG2 299 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 PRR12Q9ULL5 1215 aa6.26□□□□□ -1.41
CNEP1R1-207ENST00000566093 USP3Q9Y6I4 520 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms