RNA–Protein interactions for RNA: ENST00000566086.1

EIF3C-208, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 424 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-208ENST00000566086 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
EIF3C-208ENST00000566086 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
EIF3C-208ENST00000566086 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
EIF3C-208ENST00000566086 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
EIF3C-208ENST00000566086 FOXN1O15353 648 aa13.81□□□□□ -0.2
EIF3C-208ENST00000566086 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
EIF3C-208ENST00000566086 SRGNP10124 158 aa13.81□□□□□ -0.2
EIF3C-208ENST00000566086 ST5P78524 1137 aa13.8□□□□□ -0.2
EIF3C-208ENST00000566086 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
EIF3C-208ENST00000566086 DZIP3Q86Y13 1208 aaKnown RBP13.8□□□□□ -0.2
EIF3C-208ENST00000566086 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
EIF3C-208ENST00000566086 USP16Q9Y5T5 823 aa13.8□□□□□ -0.2
EIF3C-208ENST00000566086 CNKSR1Q969H4 720 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
EIF3C-208ENST00000566086 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 ZNF541Q9H0D2 1346 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
EIF3C-208ENST00000566086 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
EIF3C-208ENST00000566086 EAPPQ56P03 285 aaPredicted RBP13.78□□□□□ -0.2
EIF3C-208ENST00000566086 C7orf43Q8WVR3 580 aa13.78□□□□□ -0.2
EIF3C-208ENST00000566086 TAF1DQ9H5J8 278 aaPredicted RBP13.78□□□□□ -0.2
EIF3C-208ENST00000566086 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
EIF3C-208ENST00000566086 CEMIPQ8WUJ3 1361 aa13.78□□□□□ -0.2
EIF3C-208ENST00000566086 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.21
EIF3C-208ENST00000566086 BTBD11A6QL63 1104 aa13.77□□□□□ -0.21
EIF3C-208ENST00000566086 VEGFBP49765 207 aa13.77□□□□□ -0.21
EIF3C-208ENST00000566086 NUP98P52948 1817 aa13.77□□□□□ -0.21
EIF3C-208ENST00000566086 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
EIF3C-208ENST00000566086 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
EIF3C-208ENST00000566086 GAS2L2Q8NHY3 880 aa13.77□□□□□ -0.21
EIF3C-208ENST00000566086 LTBP1Q14766 1721 aa13.76□□□□□ -0.21
EIF3C-208ENST00000566086 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
EIF3C-208ENST00000566086 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
EIF3C-208ENST00000566086 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
EIF3C-208ENST00000566086 COL4A5P29400 1685 aa13.75□□□□□ -0.21
EIF3C-208ENST00000566086 DLG5Q8TDM6 1919 aa13.75□□□□□ -0.21
EIF3C-208ENST00000566086 IQCA1LA6NCM1 817 aa13.75□□□□□ -0.21
EIF3C-208ENST00000566086 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
EIF3C-208ENST00000566086 CCDC93Q567U6 631 aa13.75□□□□□ -0.21
EIF3C-208ENST00000566086 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
EIF3C-208ENST00000566086 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 NBPF26B4DH59 902 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 NPR1P16066 1061 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
EIF3C-208ENST00000566086 SOGA3Q5TF21 947 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 MAP1SQ66K74 1059 aaPredicted RBP13.74□□□□□ -0.21
EIF3C-208ENST00000566086 NBPF10Q6P3W6 841 aaKnown RBP13.74□□□□□ -0.21
EIF3C-208ENST00000566086 MCM10Q7L590 875 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 NBPF15Q8N660 670 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
EIF3C-208ENST00000566086 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
EIF3C-208ENST00000566086 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
EIF3C-208ENST00000566086 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
EIF3C-208ENST00000566086 HACL1Q9UJ83 578 aa13.73□□□□□ -0.21
EIF3C-208ENST00000566086 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
EIF3C-208ENST00000566086 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
EIF3C-208ENST00000566086 EPHX2P34913 555 aa13.72□□□□□ -0.21
EIF3C-208ENST00000566086 LBX1P52954 281 aa13.72□□□□□ -0.21
EIF3C-208ENST00000566086 HLFQ16534 295 aa13.72□□□□□ -0.21
EIF3C-208ENST00000566086 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
EIF3C-208ENST00000566086 ABCC12Q96J65 1359 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
EIF3C-208ENST00000566086 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.21
EIF3C-208ENST00000566086 CLEC4GQ6UXB4 293 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 SYNE4Q8N205 404 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.21
EIF3C-208ENST00000566086 SNED1Q8TER0 1413 aa13.71□□□□□ -0.22
EIF3C-208ENST00000566086 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
EIF3C-208ENST00000566086 IARSP41252 1262 aaKnown RBP13.7□□□□□ -0.22
EIF3C-208ENST00000566086 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
EIF3C-208ENST00000566086 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
EIF3C-208ENST00000566086 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
EIF3C-208ENST00000566086 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
EIF3C-208ENST00000566086 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
EIF3C-208ENST00000566086 FZD9O00144 591 aa13.69□□□□□ -0.22
EIF3C-208ENST00000566086 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
EIF3C-208ENST00000566086 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
EIF3C-208ENST00000566086 NGEFQ8N5V2 710 aa13.69□□□□□ -0.22
EIF3C-208ENST00000566086 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
EIF3C-208ENST00000566086 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
EIF3C-208ENST00000566086 HSPA8P11142 646 aaKnown RBP13.68□□□□□ -0.22
EIF3C-208ENST00000566086 DEFB115Q30KQ5 88 aa13.68□□□□□ -0.22
EIF3C-208ENST00000566086 RTKN2Q8IZC4 609 aa13.68□□□□□ -0.22
EIF3C-208ENST00000566086 ABT1Q9ULW3 272 aaKnown RBP13.68□□□□□ -0.22
EIF3C-208ENST00000566086 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
EIF3C-208ENST00000566086 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
EIF3C-208ENST00000566086 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
EIF3C-208ENST00000566086 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
EIF3C-208ENST00000566086 GPC2Q8N158 579 aa13.67□□□□□ -0.22
EIF3C-208ENST00000566086 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
EIF3C-208ENST00000566086 LAMB2P55268 1798 aa13.67□□□□□ -0.22
EIF3C-208ENST00000566086 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
EIF3C-208ENST00000566086 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms