RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 NECTIN2Q92692 538 aa27.2■■□□□ 1.95
SHCBP1-205ENST00000566016 MAP3K15Q6ZN16 1313 aa27.2■■□□□ 1.94
SHCBP1-205ENST00000566016 DDR1Q08345 913 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 NFIXQ14938 502 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 PARP3Q9Y6F1 533 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 POLRMTO00411 1230 aaKnown RBP27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 CCDC30Q5VVM6 783 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 KIF6Q6ZMV9 814 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 C10orf71Q711Q0 1435 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 HYPKQ9NX55 129 aa27.19■■□□□ 1.94
SHCBP1-205ENST00000566016 ANKRD36CQ5JPF3 1778 aa27.18■■□□□ 1.94
SHCBP1-205ENST00000566016 CD2APQ9Y5K6 639 aa27.18■■□□□ 1.94
SHCBP1-205ENST00000566016 CARMIL3Q8ND23 1372 aa27.17■■□□□ 1.94
SHCBP1-205ENST00000566016 ATP10DQ9P241 1426 aa27.17■■□□□ 1.94
SHCBP1-205ENST00000566016 ANXA1P04083 346 aa27.17■■□□□ 1.94
SHCBP1-205ENST00000566016 TTLL7Q6ZT98 887 aa27.17■■□□□ 1.94
SHCBP1-205ENST00000566016 SYT17Q9BSW7 474 aa27.17■■□□□ 1.94
SHCBP1-205ENST00000566016 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
SHCBP1-205ENST00000566016 TBC1D9BQ66K14 1250 aa27.16■■□□□ 1.94
SHCBP1-205ENST00000566016 EXOSC9Q06265 439 aaKnown RBP27.15■■□□□ 1.94
SHCBP1-205ENST00000566016 KIAA1551Q9HCM1 1747 aa27.14■■□□□ 1.94
SHCBP1-205ENST00000566016 ARFGEF2Q9Y6D5 1785 aa27.13■■□□□ 1.93
SHCBP1-205ENST00000566016 COPS6Q7L5N1 327 aa27.13■■□□□ 1.93
SHCBP1-205ENST00000566016 XAGE3Q8WTP9 111 aa27.13■■□□□ 1.93
SHCBP1-205ENST00000566016 VAMP4O75379 141 aa27.13■■□□□ 1.93
SHCBP1-205ENST00000566016 HNRNPUQ00839 825 aaKnown RBP eCLIP27.13■■□□□ 1.93
SHCBP1-205ENST00000566016 SETDB2Q96T68 719 aa27.13■■□□□ 1.93
SHCBP1-205ENST00000566016 HLFQ16534 295 aa27.12■■□□□ 1.93
SHCBP1-205ENST00000566016 GIGYF2Q6Y7W6 1299 aaKnown RBP27.12■■□□□ 1.93
SHCBP1-205ENST00000566016 TRMT2AQ8IZ69 625 aaKnown RBP27.12■■□□□ 1.93
SHCBP1-205ENST00000566016 ZBTB3Q9H5J0 574 aa27.12■■□□□ 1.93
SHCBP1-205ENST00000566016 GOLGB1Q14789 3259 aaKnown RBP27.11■■□□□ 1.93
SHCBP1-205ENST00000566016 STK31Q9BXU1 1019 aa27.11■■□□□ 1.93
SHCBP1-205ENST00000566016 SERPINB2P05120 415 aa27.1■■□□□ 1.93
SHCBP1-205ENST00000566016 BICDL1Q6ZP65 573 aa27.1■■□□□ 1.93
SHCBP1-205ENST00000566016 KLHL34Q8N239 644 aa27.09■■□□□ 1.93
SHCBP1-205ENST00000566016 CDCA7LQ96GN5 454 aa27.09■■□□□ 1.93
SHCBP1-205ENST00000566016 AIMP1Q12904 312 aaKnown RBP27.08■■□□□ 1.93
SHCBP1-205ENST00000566016 PLBD2Q8NHP8 589 aa27.08■■□□□ 1.93
SHCBP1-205ENST00000566016 NIP7Q9Y221 180 aaKnown RBP eCLIP27.08■■□□□ 1.93
SHCBP1-205ENST00000566016 BRCA1P38398 1863 aaKnown RBP27.08■■□□□ 1.93
SHCBP1-205ENST00000566016 ANKRD31Q8N7Z5 1873 aa27.08■■□□□ 1.93
SHCBP1-205ENST00000566016 IBTKQ9P2D0 1353 aaPredicted RBP27.08■■□□□ 1.92
SHCBP1-205ENST00000566016 ZBED9Q6R2W3 1325 aa27.07■■□□□ 1.92
SHCBP1-205ENST00000566016 N4BP2Q86UW6 1770 aaPredicted RBP27.07■■□□□ 1.92
SHCBP1-205ENST00000566016 HSP90AB3PQ58FF7 597 aa27.06■■□□□ 1.92
SHCBP1-205ENST00000566016 PXDNLA1KZ92 1463 aa27.06■■□□□ 1.92
SHCBP1-205ENST00000566016 DLEC1Q9Y238 1755 aa27.06■■□□□ 1.92
SHCBP1-205ENST00000566016 TGFB2P61812 414 aa27.06■■□□□ 1.92
SHCBP1-205ENST00000566016 ANKRD13DQ6ZTN6 518 aa27.06■■□□□ 1.92
SHCBP1-205ENST00000566016 NLGN2Q8NFZ4 835 aa27.06■■□□□ 1.92
SHCBP1-205ENST00000566016 ZNF34Q8IZ26 560 aa27.05■■□□□ 1.92
SHCBP1-205ENST00000566016 ZNF428Q96B54 188 aa27.05■■□□□ 1.92
SHCBP1-205ENST00000566016 PHAXQ9H814 394 aaKnown RBP27.05■■□□□ 1.92
SHCBP1-205ENST00000566016 CNBD1Q8NA66 436 aa27.04■■□□□ 1.92
SHCBP1-205ENST00000566016 PRR5LQ6MZQ0 368 aa27.03■■□□□ 1.92
SHCBP1-205ENST00000566016 UBN2Q6ZU65 1347 aa27.02■■□□□ 1.92
SHCBP1-205ENST00000566016 DDX58O95786 925 aaKnown RBP27.02■■□□□ 1.92
SHCBP1-205ENST00000566016 SLC4A2P04920 1241 aa27.02■■□□□ 1.92
SHCBP1-205ENST00000566016 CT47B1P0C2W7 299 aaPredicted RBP27.02■■□□□ 1.92
SHCBP1-205ENST00000566016 PARP10Q53GL7 1025 aa27.02■■□□□ 1.92
SHCBP1-205ENST00000566016 NBPF5PQ86XG9 351 aaPredicted RBP27.02■■□□□ 1.92
SHCBP1-205ENST00000566016 TCIRG1Q13488 830 aa27.01■■□□□ 1.91
SHCBP1-205ENST00000566016 UTRNP46939 3433 aa27■■□□□ 1.91
SHCBP1-205ENST00000566016 TPTE2Q6XPS3 522 aa27■■□□□ 1.91
SHCBP1-205ENST00000566016 NYXQ9GZU5 481 aa27■■□□□ 1.91
SHCBP1-205ENST00000566016 TCERG1O14776 1098 aaKnown RBP27■■□□□ 1.91
SHCBP1-205ENST00000566016 ST5P78524 1137 aa27■■□□□ 1.91
SHCBP1-205ENST00000566016 BRIP1Q9BX63 1249 aa27■■□□□ 1.91
SHCBP1-205ENST00000566016 RIC1Q4ADV7 1423 aa26.99■■□□□ 1.91
SHCBP1-205ENST00000566016 RNF123Q5XPI4 1314 aa26.99■■□□□ 1.91
SHCBP1-205ENST00000566016 COL11A2P13942 1736 aaPredicted RBP26.99■■□□□ 1.91
SHCBP1-205ENST00000566016 GPTP24298 496 aa26.99■■□□□ 1.91
SHCBP1-205ENST00000566016 FLIIQ13045 1269 aa26.99■■□□□ 1.91
SHCBP1-205ENST00000566016 RIC3Q7Z5B4 369 aa26.98■■□□□ 1.91
SHCBP1-205ENST00000566016 PDZRN3Q9UPQ7 1066 aa26.98■■□□□ 1.91
SHCBP1-205ENST00000566016 NPHP1O15259 732 aa26.97■■□□□ 1.91
SHCBP1-205ENST00000566016 ADCY9O60503 1353 aa26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 TRIM28Q13263 835 aaKnown RBP26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 KSR2Q6VAB6 950 aa26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 G2E3Q7L622 706 aa26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 PPP1R42Q7Z4L9 355 aa26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 ISCA1Q9BUE6 129 aa26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 ARFGEF1Q9Y6D6 1849 aa26.96■■□□□ 1.91
SHCBP1-205ENST00000566016 NTSR2O95665 410 aa26.95■■□□□ 1.91
SHCBP1-205ENST00000566016 NLRP10Q86W26 655 aa26.95■■□□□ 1.91
SHCBP1-205ENST00000566016 PDE6BP35913 854 aa26.94■■□□□ 1.9
SHCBP1-205ENST00000566016 SUSD4Q5VX71 490 aa26.94■■□□□ 1.9
SHCBP1-205ENST00000566016 TNRC6CQ9HCJ0 1690 aaKnown RBP26.94■■□□□ 1.9
SHCBP1-205ENST00000566016 PI4KAP2A4QPH2 592 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 DPEP1P16444 411 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 ALDH1L2Q3SY69 923 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 PI4KAP1Q8N8J0 262 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 METTL22Q9BUU2 404 aaPredicted RBP26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 LAMB2P55268 1798 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 A0A0G2JLW4 131 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 KCNA3P22001 575 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 MAP3K2Q9Y2U5 619 aa26.93■■□□□ 1.9
SHCBP1-205ENST00000566016 ABCC12Q96J65 1359 aa26.92■■□□□ 1.9
SHCBP1-205ENST00000566016 DCAF8L1A6NGE4 600 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms