RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF827Q17R98 1081 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
CDH1-208ENST00000565810 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 NARFQ9UHQ1 456 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 MAP3K2Q9Y2U5 619 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 VIRMAQ69YN4 1812 aaKnown RBP9.86□□□□□ -0.83
CDH1-208ENST00000565810 F6X3S4 739 aa9.86□□□□□ -0.83
CDH1-208ENST00000565810 RGL2O15211 777 aa9.86□□□□□ -0.83
CDH1-208ENST00000565810 NEFLP07196 543 aa9.86□□□□□ -0.83
CDH1-208ENST00000565810 CCT4P50991 539 aaKnown RBP9.86□□□□□ -0.83
CDH1-208ENST00000565810 CLEC4GQ6UXB4 293 aa9.86□□□□□ -0.83
CDH1-208ENST00000565810 CLUAP1Q96AJ1 413 aa9.86□□□□□ -0.83
CDH1-208ENST00000565810 METTL22Q9BUU2 404 aaPredicted RBP9.86□□□□□ -0.83
CDH1-208ENST00000565810 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
CDH1-208ENST00000565810 CAMTA2O94983 1202 aa9.85□□□□□ -0.83
CDH1-208ENST00000565810 TCIRG1Q13488 830 aa9.85□□□□□ -0.83
CDH1-208ENST00000565810 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
CDH1-208ENST00000565810 SMIM5Q71RC9 77 aa9.85□□□□□ -0.83
CDH1-208ENST00000565810 MYD88Q99836 296 aa9.85□□□□□ -0.83
CDH1-208ENST00000565810 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
CDH1-208ENST00000565810 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
CDH1-208ENST00000565810 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
CDH1-208ENST00000565810 ZNF831Q5JPB2 1677 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 HLFQ16534 295 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 USPL1Q5W0Q7 1092 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 AMIGO3Q86WK7 504 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 COL23A1Q86Y22 540 aaPredicted RBP9.84□□□□□ -0.83
CDH1-208ENST00000565810 ITPRIPQ8IWB1 547 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 LINS1Q8NG48 757 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 PANK1Q8TE04 598 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 LY75O60449 1722 aa9.84□□□□□ -0.83
CDH1-208ENST00000565810 TNS1Q9HBL0 1735 aaKnown RBP9.84□□□□□ -0.83
CDH1-208ENST00000565810 C5P01031 1676 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 ABCC4O15439 1325 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
CDH1-208ENST00000565810 TJP1Q07157 1748 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 ATP5J2-PTCD1G3V325 749 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 ALDH1L1O75891 902 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 TRIM28Q13263 835 aaKnown RBP9.83□□□□□ -0.84
CDH1-208ENST00000565810 BEND3Q5T5X7 828 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
CDH1-208ENST00000565810 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 TMEM57Q8N5G2 664 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 SETDB2Q96T68 719 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 SRP68Q9UHB9 627 aaKnown RBP9.83□□□□□ -0.84
CDH1-208ENST00000565810 ADCY9O60503 1353 aa9.83□□□□□ -0.84
CDH1-208ENST00000565810 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 CICQ96RK0 1608 aaPredicted RBP9.82□□□□□ -0.84
CDH1-208ENST00000565810 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 GPTP24298 496 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 MVPQ14764 893 aaKnown RBP9.82□□□□□ -0.84
CDH1-208ENST00000565810 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 C20orf194Q5TEA3 1177 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 CCDC191Q8NCU4 936 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 SLC16A10Q8TF71 515 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 ISCA1Q9BUE6 129 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 CWC25Q9NXE8 425 aaPredicted RBP9.82□□□□□ -0.84
CDH1-208ENST00000565810 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
CDH1-208ENST00000565810 DDX19BQ9UMR2 479 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 HDAC5Q9UQL6 1122 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 TNNQ9UQP3 1299 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 NIP7Q9Y221 180 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDH1-208ENST00000565810 COG6Q9Y2V7 657 aa9.82□□□□□ -0.84
CDH1-208ENST00000565810 LAMB4A4D0S4 1761 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 RGPD3A6NKT7 1758 aaPredicted RBP9.81□□□□□ -0.84
CDH1-208ENST00000565810 RGPD4Q7Z3J3 1758 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 NEURL1BA8MQ27 555 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 SOCS7O14512 581 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 NPHP1O15259 732 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 IGKV5-2P06315 115 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 RLBP1P12271 317 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 GYS1P13807 737 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 FKBP8Q14318 412 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 R3HDM1Q15032 1099 aaKnown RBP9.81□□□□□ -0.84
CDH1-208ENST00000565810 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 PPP1R42Q7Z4L9 355 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 ZNF34Q8IZ26 560 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
CDH1-208ENST00000565810 GNAI3P08754 354 aa9.8□□□□□ -0.84
CDH1-208ENST00000565810 HSP90B1P14625 803 aaKnown RBP9.8□□□□□ -0.84
CDH1-208ENST00000565810 GTF2E1P29083 439 aaPredicted RBP9.8□□□□□ -0.84
CDH1-208ENST00000565810 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
CDH1-208ENST00000565810 GCKRQ14397 625 aa9.8□□□□□ -0.84
CDH1-208ENST00000565810 CWF19L2Q2TBE0 894 aaKnown RBP9.8□□□□□ -0.84
CDH1-208ENST00000565810 TBC1D9BQ66K14 1250 aa9.8□□□□□ -0.84
CDH1-208ENST00000565810 NLRP10Q86W26 655 aa9.8□□□□□ -0.84
CDH1-208ENST00000565810 CRBNQ96SW2 442 aa9.8□□□□□ -0.84
CDH1-208ENST00000565810 UTP14AQ9BVJ6 771 aaKnown RBP9.8□□□□□ -0.84
CDH1-208ENST00000565810 NYXQ9GZU5 481 aa9.8□□□□□ -0.84
CDH1-208ENST00000565810 TRMT112Q9UI30 125 aaKnown RBP9.8□□□□□ -0.84
CDH1-208ENST00000565810 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
CDH1-208ENST00000565810 GRM8O00222 908 aa9.79□□□□□ -0.84
CDH1-208ENST00000565810 AAMPQ13685 434 aa9.79□□□□□ -0.84
CDH1-208ENST00000565810 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
CDH1-208ENST00000565810 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
CDH1-208ENST00000565810 ZBTB38Q8NAP3 1195 aaPredicted RBP9.79□□□□□ -0.84
CDH1-208ENST00000565810 PARP3Q9Y6F1 533 aa9.79□□□□□ -0.84
CDH1-208ENST00000565810 COL5A3P25940 1745 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms