RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PRM3Q9NNZ6 103 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 MAGEC2Q9UBF1 373 aaPredicted RBP3.9□□□□□ -1.79
CHD9-216ENST00000565803 KCNG1Q9UIX4 513 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 PIK3C2AO00443 1686 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 GIGYF1O75420 1035 aaPredicted RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 BAG6P46379 1132 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 APLP1P51693 650 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 CAPN10Q9HC96 672 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 YTHDC2Q9H6S0 1430 aaKnown RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 DHX16O60231 1041 aaKnown RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 L1TD1Q5T7N2 865 aaKnown RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 ZNF622Q969S3 477 aaKnown RBP eCLIP3.89□□□□□ -1.794e-7■■■■□ 19.3
CHD9-216ENST00000565803 RPS6KC1Q96S38 1066 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 PRKAG2Q9UGJ0 569 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 FAN1Q9Y2M0 1017 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 BRD4O60885 1362 aaPredicted RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 CCDC194A0A1B0GVG4 234 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 KCNQ2O43526 872 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 TAGLNQ01995 201 aaKnown RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 DOK7Q18PE1 504 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 CCDC144BQ3MJ40 725 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 AXDND1Q5T1B0 1012 aaPredicted RBP3.89□□□□□ -1.79
CHD9-216ENST00000565803 SMC5Q8IY18 1101 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 CXorf38Q8TB03 319 aa3.89□□□□□ -1.79
CHD9-216ENST00000565803 TUBGCP6Q96RT7 1819 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 IFT172Q9UG01 1749 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 DYTNA2CJ06 578 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 ANKRD33BA6NCL7 494 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 U2SURPO15042 1029 aaKnown RBP3.88□□□□□ -1.79
CHD9-216ENST00000565803 LHX8Q68G74 356 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 TSHZ1Q6ZSZ6 1077 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 FILIP1Q7Z7B0 1213 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 ZNF500O60304 480 aaPredicted RBP3.88□□□□□ -1.79
CHD9-216ENST00000565803 ABL1P00519 1130 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 POTEEQ6S8J3 1075 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 GET4Q7L5D6 327 aaPredicted RBP3.88□□□□□ -1.79
CHD9-216ENST00000565803 JDP2Q8WYK2 163 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 FRMD4BQ9Y2L6 1034 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 PHRF1Q9P1Y6 1649 aaKnown RBP3.88□□□□□ -1.79
CHD9-216ENST00000565803 USP54Q70EL1 1684 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 TBC1D12O60347 775 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 B4GALNT3Q6L9W6 998 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 ZHX3Q9H4I2 956 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 IGSF5Q9NSI5 407 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 PRR12Q9ULL5 1215 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 TBC1D2BQ9UPU7 963 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 ABCC6O95255 1503 aa3.88□□□□□ -1.79
CHD9-216ENST00000565803 LRRC37A3O60309 1634 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 SPDYE5A6NIY4 337 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 CCDC85CA6NKD9 419 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 PPFIA4O75335 1185 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 HSP90AA1P07900 732 aaKnown RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 MS4A1P11836 297 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 TERF1P54274 439 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 SDE2Q6IQ49 451 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 TXNDC2Q86VQ3 553 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 BCL2L12Q9HB09 334 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 COMMD10Q9Y6G5 202 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 MINK1Q8N4C8 1332 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 PSDA5PKW4 1024 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 TNNT2P45379 298 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 FAM160A1Q05DH4 1040 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 MAP2K5Q13163 448 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 ZNF280DQ6N043 979 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 FMNL3Q8IVF7 1028 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 NME8Q8N427 588 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 PITPNM2Q9BZ72 1349 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 PPLO60437 1756 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 NUTM2BA6NNL0 878 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 NUTM2EB1AL46 878 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 IRF6O14896 467 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 EPB41L2O43491 1005 aaKnown RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 SERPINB4P48594 390 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 NUTM2DQ5VT03 806 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 TYW1BQ6NUM6 668 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 NUTM2AQ8IVF1 878 aaPredicted RBP3.87□□□□□ -1.79
CHD9-216ENST00000565803 TBC1D2Q9BYX2 928 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 USP21Q9UK80 565 aa3.87□□□□□ -1.79
CHD9-216ENST00000565803 TECPR2O15040 1411 aa3.86□□□□□ -1.79
CHD9-216ENST00000565803 AKAP12Q02952 1782 aa3.86□□□□□ -1.79
CHD9-216ENST00000565803 BHMG1C9JSJ3 638 aaPredicted RBP3.86□□□□□ -1.79
CHD9-216ENST00000565803 TUSC1Q2TAM9 212 aa3.86□□□□□ -1.79
CHD9-216ENST00000565803 C3orf67Q6ZVT6 689 aa3.86□□□□□ -1.79
CHD9-216ENST00000565803 SPON1Q9HCB6 807 aa3.86□□□□□ -1.79
CHD9-216ENST00000565803 GOPCQ9HD26 462 aa3.86□□□□□ -1.79
CHD9-216ENST00000565803 FBXO9Q9UK97 447 aaPredicted RBP3.86□□□□□ -1.79
CHD9-216ENST00000565803 NOP58Q9Y2X3 529 aaKnown RBP3.86□□□□□ -1.79
CHD9-216ENST00000565803 DHX57Q6P158 1386 aaKnown RBP3.86□□□□□ -1.79
CHD9-216ENST00000565803 BRCA1P38398 1863 aaKnown RBP3.86□□□□□ -1.79
CHD9-216ENST00000565803 POTEB3A0JP26 581 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 LIG1P18858 919 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 POTEBQ6S5H4 581 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 C11orf96Q7Z7L8 435 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 UNC5CLQ8IV45 518 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 HSCBQ8IWL3 235 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 ZCRB1Q8TBF4 217 aaKnown RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 PIK3R5Q8WYR1 880 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 SPACA7Q96KW9 195 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 C8orf37Q96NL8 207 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 EYA1Q99502 592 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms