RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 HSPA1AP0DMV8 641 aaKnown RBP28.69■■■□□ 2.18
RPUSD1-206ENST00000565503 HSPA1BP0DMV9 641 aaKnown RBP28.69■■■□□ 2.18
RPUSD1-206ENST00000565503 SRGNP10124 158 aa28.68■■■□□ 2.18
RPUSD1-206ENST00000565503 PRPF40BQ6NWY9 871 aaKnown RBP28.67■■■□□ 2.18
RPUSD1-206ENST00000565503 MASTLQ96GX5 879 aa28.67■■■□□ 2.18
RPUSD1-206ENST00000565503 SCN4AP35499 1836 aa28.66■■■□□ 2.18
RPUSD1-206ENST00000565503 BTBD11A6QL63 1104 aa28.66■■■□□ 2.18
RPUSD1-206ENST00000565503 CHADLQ6NUI6 762 aa28.66■■■□□ 2.18
RPUSD1-206ENST00000565503 DZIP3Q86Y13 1208 aaKnown RBP28.66■■■□□ 2.18
RPUSD1-206ENST00000565503 CLEC4GQ6UXB4 293 aa28.64■■■□□ 2.18
RPUSD1-206ENST00000565503 CREBZFQ9NS37 354 aa28.64■■■□□ 2.18
RPUSD1-206ENST00000565503 KCNQ3O43525 872 aa28.62■■■□□ 2.17
RPUSD1-206ENST00000565503 CAPN15O75808 1086 aa28.62■■■□□ 2.17
RPUSD1-206ENST00000565503 DDNO94850 711 aaPredicted RBP28.62■■■□□ 2.17
RPUSD1-206ENST00000565503 PHACTR3Q96KR7 559 aa28.62■■■□□ 2.17
RPUSD1-206ENST00000565503 PRKAR2BP31323 418 aa28.61■■■□□ 2.17
RPUSD1-206ENST00000565503 ZNF652Q9Y2D9 606 aa28.61■■■□□ 2.17
RPUSD1-206ENST00000565503 NBPF5PQ86XG9 351 aaPredicted RBP28.6■■■□□ 2.17
RPUSD1-206ENST00000565503 RSPH6AQ9H0K4 717 aa28.6■■■□□ 2.17
RPUSD1-206ENST00000565503 USP16Q9Y5T5 823 aa28.6■■■□□ 2.17
RPUSD1-206ENST00000565503 IQCA1LA6NCM1 817 aa28.59■■■□□ 2.17
RPUSD1-206ENST00000565503 RGL2O15211 777 aa28.59■■■□□ 2.17
RPUSD1-206ENST00000565503 C7orf43Q8WVR3 580 aa28.59■■■□□ 2.17
RPUSD1-206ENST00000565503 CFAP53Q96M91 514 aa28.59■■■□□ 2.17
RPUSD1-206ENST00000565503 SNRPA1P09661 255 aaKnown RBP28.58■■■□□ 2.17
RPUSD1-206ENST00000565503 CCDC93Q567U6 631 aa28.58■■■□□ 2.17
RPUSD1-206ENST00000565503 L3MBTL3Q96JM7 780 aaPredicted RBP28.58■■■□□ 2.17
RPUSD1-206ENST00000565503 POTEIP0CG38 1075 aa28.57■■■□□ 2.16
RPUSD1-206ENST00000565503 POTEJP0CG39 1038 aa28.57■■■□□ 2.16
RPUSD1-206ENST00000565503 NPR1P16066 1061 aa28.57■■■□□ 2.16
RPUSD1-206ENST00000565503 CNGB1Q14028 1251 aaPredicted RBP28.57■■■□□ 2.16
RPUSD1-206ENST00000565503 KLRG2A4D1S0 409 aaPredicted RBP28.56■■■□□ 2.16
RPUSD1-206ENST00000565503 LDHDQ86WU2 507 aa28.56■■■□□ 2.16
RPUSD1-206ENST00000565503 PIP4K2AP48426 406 aaPredicted RBP28.55■■■□□ 2.16
RPUSD1-206ENST00000565503 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
RPUSD1-206ENST00000565503 PRAMEF22A3QJZ6 481 aa28.54■■■□□ 2.16
RPUSD1-206ENST00000565503 TPTE2Q6XPS3 522 aa28.54■■■□□ 2.16
RPUSD1-206ENST00000565503 RTF1Q92541 710 aaKnown RBP28.54■■■□□ 2.16
RPUSD1-206ENST00000565503 MKRN1Q9UHC7 482 aaKnown RBP28.54■■■□□ 2.16
RPUSD1-206ENST00000565503 PASKQ96RG2 1323 aa28.53■■■□□ 2.16
RPUSD1-206ENST00000565503 FKBP4Q02790 459 aaKnown RBP eCLIP28.53■■■□□ 2.16
RPUSD1-206ENST00000565503 TAF1DQ9H5J8 278 aaPredicted RBP28.53■■■□□ 2.16
RPUSD1-206ENST00000565503 CNTNAP1P78357 1384 aa28.51■■■□□ 2.16
RPUSD1-206ENST00000565503 NIP7Q9Y221 180 aaKnown RBP eCLIP28.51■■■□□ 2.15
RPUSD1-206ENST00000565503 LAMB4A4D0S4 1761 aa28.51■■■□□ 2.15
RPUSD1-206ENST00000565503 MCM10Q7L590 875 aa28.5■■■□□ 2.15
RPUSD1-206ENST00000565503 RTKN2Q8IZC4 609 aa28.5■■■□□ 2.15
RPUSD1-206ENST00000565503 NBPF26B4DH59 902 aa28.49■■■□□ 2.15
RPUSD1-206ENST00000565503 HTATSF1O43719 755 aaKnown RBP28.49■■■□□ 2.15
RPUSD1-206ENST00000565503 NBPF10Q6P3W6 841 aaKnown RBP28.49■■■□□ 2.15
RPUSD1-206ENST00000565503 NBPF15Q8N660 670 aa28.49■■■□□ 2.15
RPUSD1-206ENST00000565503 ADAMTSL1Q8N6G6 1762 aa28.49■■■□□ 2.15
RPUSD1-206ENST00000565503 U2AF1L5P0DN76 240 aaPredicted RBP28.48■■■□□ 2.15
RPUSD1-206ENST00000565503 U2AF1Q01081 240 aaKnown RBP eCLIP28.48■■■□□ 2.15
RPUSD1-206ENST00000565503 ZNF277Q9NRM2 450 aaPredicted RBP28.48■■■□□ 2.15
RPUSD1-206ENST00000565503 ZNF541Q9H0D2 1346 aa28.46■■■□□ 2.15
RPUSD1-206ENST00000565503 NUP98P52948 1817 aa28.46■■■□□ 2.15
RPUSD1-206ENST00000565503 ALDH1B1P30837 517 aa28.46■■■□□ 2.15
RPUSD1-206ENST00000565503 HACL1Q9UJ83 578 aa28.46■■■□□ 2.15
RPUSD1-206ENST00000565503 TMEM88BA6NKF7 163 aa28.45■■■□□ 2.14
RPUSD1-206ENST00000565503 ITGBL1O95965 494 aaPredicted RBP28.44■■■□□ 2.14
RPUSD1-206ENST00000565503 EAPPQ56P03 285 aaPredicted RBP28.43■■■□□ 2.14
RPUSD1-206ENST00000565503 OLFM4Q6UX06 510 aa28.43■■■□□ 2.14
RPUSD1-206ENST00000565503 DLG5Q8TDM6 1919 aa28.43■■■□□ 2.14
RPUSD1-206ENST00000565503 FZD9O00144 591 aa28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 FOXN1O15353 648 aa28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 IARSP41252 1262 aaKnown RBP28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 DCTN1Q14203 1278 aa28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 TAF7Q15545 349 aaPredicted RBP28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 PNMA8AQ86V59 439 aaPredicted RBP28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 PRDM10Q9NQV6 1147 aa28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 KDM3BQ7LBC6 1761 aa28.42■■■□□ 2.14
RPUSD1-206ENST00000565503 FAM177BA6PVY3 158 aa28.41■■■□□ 2.14
RPUSD1-206ENST00000565503 GTF2E1P29083 439 aaPredicted RBP28.41■■■□□ 2.14
RPUSD1-206ENST00000565503 PPP2R1AP30153 589 aa28.41■■■□□ 2.14
RPUSD1-206ENST00000565503 EPHX2P34913 555 aa28.41■■■□□ 2.14
RPUSD1-206ENST00000565503 HLFQ16534 295 aa28.41■■■□□ 2.14
RPUSD1-206ENST00000565503 VEGFBP49765 207 aa28.4■■■□□ 2.14
RPUSD1-206ENST00000565503 CRY2Q49AN0 593 aa28.4■■■□□ 2.14
RPUSD1-206ENST00000565503 SYNE4Q8N205 404 aa28.4■■■□□ 2.14
RPUSD1-206ENST00000565503 PSMD1Q99460 953 aa28.4■■■□□ 2.14
RPUSD1-206ENST00000565503 NYXQ9GZU5 481 aa28.4■■■□□ 2.14
RPUSD1-206ENST00000565503 SNED1Q8TER0 1413 aa28.4■■■□□ 2.14
RPUSD1-206ENST00000565503 GPC2Q8N158 579 aa28.39■■■□□ 2.14
RPUSD1-206ENST00000565503 AIDAQ96BJ3 306 aa28.39■■■□□ 2.14
RPUSD1-206ENST00000565503 CLEC11AQ9Y240 323 aa28.39■■■□□ 2.14
RPUSD1-206ENST00000565503 ERVV-1B6SEH8 477 aa28.38■■■□□ 2.13
RPUSD1-206ENST00000565503 RNF123Q5XPI4 1314 aa28.38■■■□□ 2.13
RPUSD1-206ENST00000565503 RIC1Q4ADV7 1423 aa28.37■■■□□ 2.13
RPUSD1-206ENST00000565503 CTCFP49711 727 aaPredicted RBP28.37■■■□□ 2.13
RPUSD1-206ENST00000565503 CC2D2BQ6DHV5 1058 aa28.37■■■□□ 2.13
RPUSD1-206ENST00000565503 JDP2Q8WYK2 163 aa28.36■■■□□ 2.13
RPUSD1-206ENST00000565503 ABCC12Q96J65 1359 aa28.36■■■□□ 2.13
RPUSD1-206ENST00000565503 CNTROBQ8N137 903 aa28.35■■■□□ 2.13
RPUSD1-206ENST00000565503 PNISRQ8TF01 805 aaKnown RBP28.35■■■□□ 2.13
RPUSD1-206ENST00000565503 IBTKQ9P2D0 1353 aaPredicted RBP28.35■■■□□ 2.13
RPUSD1-206ENST00000565503 RASSF10A6NK89 507 aa28.34■■■□□ 2.13
RPUSD1-206ENST00000565503 GRIPAP1Q4V328 841 aa28.34■■■□□ 2.13
RPUSD1-206ENST00000565503 WBP1LQ9NX94 342 aa28.34■■■□□ 2.13
RPUSD1-206ENST00000565503 MIS18AQ9NYP9 233 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms