RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
NSMCE1-209ENST00000565384 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
NSMCE1-209ENST00000565384 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
NSMCE1-209ENST00000565384 STYK1Q6J9G0 422 aa15.5■□□□□ 0.07
NSMCE1-209ENST00000565384 ARFGEF2Q9Y6D5 1785 aa15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 DICER1Q9UPY3 1922 aaKnown RBP15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 SRGNP10124 158 aa15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 PRPF40BQ6NWY9 871 aaKnown RBP15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 MCM10Q7L590 875 aa15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 MASTLQ96GX5 879 aa15.49■□□□□ 0.07
NSMCE1-209ENST00000565384 CACNA1SQ13698 1873 aa15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 SLX4Q8IY92 1834 aa15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 COL13A1Q5TAT6 717 aaPredicted RBP15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 SOGA3Q5TF21 947 aa15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 ZNF652Q9Y2D9 606 aa15.48■□□□□ 0.07
NSMCE1-209ENST00000565384 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
NSMCE1-209ENST00000565384 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
NSMCE1-209ENST00000565384 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
NSMCE1-209ENST00000565384 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
NSMCE1-209ENST00000565384 NBPF26B4DH59 902 aa15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 NPR1P16066 1061 aa15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 CCDC93Q567U6 631 aa15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 NBPF10Q6P3W6 841 aaKnown RBP15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 NBPF15Q8N660 670 aa15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 NIP7Q9Y221 180 aaKnown RBP eCLIP15.44■□□□□ 0.06
NSMCE1-209ENST00000565384 RGL2O15211 777 aa15.43■□□□□ 0.06
NSMCE1-209ENST00000565384 HSPA1AP0DMV8 641 aaKnown RBP15.43■□□□□ 0.06
NSMCE1-209ENST00000565384 HSPA1BP0DMV9 641 aaKnown RBP15.43■□□□□ 0.06
NSMCE1-209ENST00000565384 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
NSMCE1-209ENST00000565384 TPTE2Q6XPS3 522 aa15.43■□□□□ 0.06
NSMCE1-209ENST00000565384 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
NSMCE1-209ENST00000565384 LAMB4A4D0S4 1761 aa15.42■□□□□ 0.06
NSMCE1-209ENST00000565384 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
NSMCE1-209ENST00000565384 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
NSMCE1-209ENST00000565384 POTEJP0CG39 1038 aa15.42■□□□□ 0.06
NSMCE1-209ENST00000565384 IQCA1LA6NCM1 817 aa15.41■□□□□ 0.06
NSMCE1-209ENST00000565384 FAM177BA6PVY3 158 aa15.41■□□□□ 0.06
NSMCE1-209ENST00000565384 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.06
NSMCE1-209ENST00000565384 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
NSMCE1-209ENST00000565384 HLFQ16534 295 aa15.41■□□□□ 0.06
NSMCE1-209ENST00000565384 TNS4Q8IZW8 715 aa15.41■□□□□ 0.06
NSMCE1-209ENST00000565384 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
NSMCE1-209ENST00000565384 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
NSMCE1-209ENST00000565384 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
NSMCE1-209ENST00000565384 OLFM4Q6UX06 510 aa15.39■□□□□ 0.05
NSMCE1-209ENST00000565384 TAF1DQ9H5J8 278 aaPredicted RBP15.39■□□□□ 0.05
NSMCE1-209ENST00000565384 ZNF277Q9NRM2 450 aaPredicted RBP15.39■□□□□ 0.05
NSMCE1-209ENST00000565384 ZNF541Q9H0D2 1346 aa15.39■□□□□ 0.05
NSMCE1-209ENST00000565384 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
NSMCE1-209ENST00000565384 GTF2E1P29083 439 aaPredicted RBP15.38■□□□□ 0.05
NSMCE1-209ENST00000565384 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
NSMCE1-209ENST00000565384 RTKN2Q8IZC4 609 aa15.38■□□□□ 0.05
NSMCE1-209ENST00000565384 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
NSMCE1-209ENST00000565384 MKRN1Q9UHC7 482 aaKnown RBP15.38■□□□□ 0.05
NSMCE1-209ENST00000565384 SCN4AP35499 1836 aa15.38■□□□□ 0.05
NSMCE1-209ENST00000565384 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
NSMCE1-209ENST00000565384 CAPN15O75808 1086 aa15.37■□□□□ 0.05
NSMCE1-209ENST00000565384 NEFMP07197 916 aa15.37■□□□□ 0.05
NSMCE1-209ENST00000565384 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
NSMCE1-209ENST00000565384 NGEFQ8N5V2 710 aa15.37■□□□□ 0.05
NSMCE1-209ENST00000565384 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
NSMCE1-209ENST00000565384 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
NSMCE1-209ENST00000565384 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
NSMCE1-209ENST00000565384 NYXQ9GZU5 481 aa15.36■□□□□ 0.05
NSMCE1-209ENST00000565384 DLG5Q8TDM6 1919 aa15.36■□□□□ 0.05
NSMCE1-209ENST00000565384 MAP3K15Q6ZN16 1313 aa15.36■□□□□ 0.05
NSMCE1-209ENST00000565384 SNED1Q8TER0 1413 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 ERVV-1B6SEH8 477 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 EIF4A1P60842 406 aaKnown RBP15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 CRY2Q49AN0 593 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 SYNE4Q8N205 404 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 PLEKHF1Q96S99 279 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 CNTNAP1P78357 1384 aa15.35■□□□□ 0.05
NSMCE1-209ENST00000565384 FZD9O00144 591 aa15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 TTLL7Q6ZT98 887 aa15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 THUMPD2Q9BTF0 503 aaKnown RBP15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 RRP7AQ9Y3A4 280 aaKnown RBP15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 RNF123Q5XPI4 1314 aa15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
NSMCE1-209ENST00000565384 MYL6BP14649 208 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 EPHX2P34913 555 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 NFE2L2Q16236 605 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 PSMD1Q99460 953 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 UBN2Q6ZU65 1347 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 NUP98P52948 1817 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
NSMCE1-209ENST00000565384 ITGBL1O95965 494 aaPredicted RBP15.32■□□□□ 0.04
NSMCE1-209ENST00000565384 GPTP24298 496 aa15.32■□□□□ 0.04
NSMCE1-209ENST00000565384 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
NSMCE1-209ENST00000565384 ZBTB3Q9H5J0 574 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms