RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 NFAT5O94916 1531 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 CRYBG1Q9Y4K1 1723 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 BTBD11A6QL63 1104 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 STX6O43752 255 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
SMG1-210ENST00000565224 AKAP4Q5JQC9 854 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 CCDC183Q5T5S1 534 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 CLASRPQ8N2M8 674 aaKnown RBP8.73□□□□□ -1.01
SMG1-210ENST00000565224 GPATCH3Q96I76 525 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 DBF4Q9UBU7 674 aaPredicted RBP8.73□□□□□ -1.01
SMG1-210ENST00000565224 SPG7Q9UQ90 795 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 SMC3Q9UQE7 1217 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 ADGRL3Q9HAR2 1447 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 KDM3BQ7LBC6 1761 aa8.73□□□□□ -1.01
SMG1-210ENST00000565224 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 ANXA1P04083 346 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 SYT1P21579 422 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 PLEKHO1Q53GL0 409 aaPredicted RBP8.72□□□□□ -1.01
SMG1-210ENST00000565224 ZNF530Q6P9A1 599 aaPredicted RBP8.72□□□□□ -1.01
SMG1-210ENST00000565224 ERC1Q8IUD2 1116 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 ECHDC1Q9NTX5 307 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 CNPY2Q9Y2B0 182 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 ATP6V1DQ9Y5K8 247 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 LTBP4Q8N2S1 1624 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 LETM1O95202 739 aaPredicted RBP8.72□□□□□ -1.01
SMG1-210ENST00000565224 F13A1P00488 732 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 PTMAP06454 111 aaKnown RBP8.72□□□□□ -1.01
SMG1-210ENST00000565224 CASTP20810 708 aaKnown RBP8.72□□□□□ -1.01
SMG1-210ENST00000565224 UBE2HP62256 183 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 UVSSAQ2YD98 709 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 HDAC5Q9UQL6 1122 aa8.72□□□□□ -1.01
SMG1-210ENST00000565224 R3HCC1Q9Y3T6 440 aaKnown RBP8.72□□□□□ -1.01
SMG1-210ENST00000565224 LTN1O94822 1766 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 NCAPD2Q15021 1401 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 VPS53Q5VIR6 699 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 KCNH5Q8NCM2 988 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 RBM33Q96EV2 1170 aaKnown RBP8.71□□□□□ -1.01
SMG1-210ENST00000565224 ZSCAN31Q96LW9 406 aaPredicted RBP8.71□□□□□ -1.01
SMG1-210ENST00000565224 PDRG1Q9NUG6 133 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 HYPKQ9NX55 129 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 C9orf78Q9NZ63 289 aaPredicted RBP8.71□□□□□ -1.01
SMG1-210ENST00000565224 MAP3K2Q9Y2U5 619 aa8.71□□□□□ -1.01
SMG1-210ENST00000565224 IFIT2P09913 472 aaKnown RBP8.71□□□□□ -1.02
SMG1-210ENST00000565224 AMOTQ4VCS5 1084 aa8.71□□□□□ -1.02
SMG1-210ENST00000565224 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
SMG1-210ENST00000565224 MPRIPQ6WCQ1 1025 aa8.71□□□□□ -1.02
SMG1-210ENST00000565224 KCNB2Q92953 911 aa8.71□□□□□ -1.02
SMG1-210ENST00000565224 JAKMIP1Q96N16 626 aaKnown RBP8.71□□□□□ -1.02
SMG1-210ENST00000565224 LARP6Q9BRS8 491 aaKnown RBP8.71□□□□□ -1.02
SMG1-210ENST00000565224 TM6SF1Q9BZW5 370 aa8.71□□□□□ -1.02
SMG1-210ENST00000565224 LMO7Q8WWI1 1683 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 OVOS2A0A0G2JMS6 1433 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 ZBTB7CA1YPR0 619 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 RNMTO43148 476 aaKnown RBP8.7□□□□□ -1.02
SMG1-210ENST00000565224 LARGE1O95461 756 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 CPA1P15085 419 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 PTH1RQ03431 593 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 PRPF40BQ6NWY9 871 aaKnown RBP8.7□□□□□ -1.02
SMG1-210ENST00000565224 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 EVI5LQ96CN4 794 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 ZSWIM6Q9HCJ5 1215 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 SH2B1Q9NRF2 756 aaPredicted RBP8.7□□□□□ -1.02
SMG1-210ENST00000565224 CYP46A1Q9Y6A2 500 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 FIBPO43427 364 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 GJB2P29033 226 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 AACSQ86V21 672 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 CCDC83Q8IWF9 413 aa8.7□□□□□ -1.02
SMG1-210ENST00000565224 LRRC59Q96AG4 307 aaKnown RBP8.7□□□□□ -1.02
SMG1-210ENST00000565224 CCDC171Q6TFL3 1326 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 HIP1O00291 1037 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
SMG1-210ENST00000565224 ZKSCAN1P17029 563 aaPredicted RBP8.69□□□□□ -1.02
SMG1-210ENST00000565224 PSME1Q06323 249 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 KIAA2012Q0VF49 1180 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 PROSER3Q2NL68 480 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 ADCK5Q3MIX3 580 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 PDCL3Q9H2J4 239 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 PA2G4Q9UQ80 394 aaKnown RBP8.69□□□□□ -1.02
SMG1-210ENST00000565224 MTMR6Q9Y217 621 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMG1-210ENST00000565224 PXDNQ92626 1479 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 HEG1Q9ULI3 1381 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 NECTIN1Q15223 517 aa8.69□□□□□ -1.02
SMG1-210ENST00000565224 CWF19L2Q2TBE0 894 aaKnown RBP8.69□□□□□ -1.02
SMG1-210ENST00000565224 PHRF1Q9P1Y6 1649 aaKnown RBP8.68□□□□□ -1.02
SMG1-210ENST00000565224 UQCRHLA0A096LP55 91 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 UQCRHP07919 91 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 LINS1Q8NG48 757 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 USP25Q9UHP3 1055 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 RBM8AQ9Y5S9 174 aaKnown RBP8.68□□□□□ -1.02
SMG1-210ENST00000565224 UTYO14607 1347 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 GRM8O00222 908 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 HCLS1P14317 486 aaPredicted RBP8.68□□□□□ -1.02
SMG1-210ENST00000565224 KCNJ4P48050 445 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 DNM1Q05193 864 aaKnown RBP8.68□□□□□ -1.02
SMG1-210ENST00000565224 G3BP1Q13283 466 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMG1-210ENST00000565224 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 CREB3L3Q68CJ9 461 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms