RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 C21orf2O43822 256 aa11.43□□□□□ -0.58
CAPN3-213ENST00000565173 SRGNP10124 158 aa11.43□□□□□ -0.58
CAPN3-213ENST00000565173 HTRA3P83110 453 aa11.43□□□□□ -0.58
CAPN3-213ENST00000565173 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
CAPN3-213ENST00000565173 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
CAPN3-213ENST00000565173 RGL2O15211 777 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 VEGFAP15692 232 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-213ENST00000565173 HLFQ16534 295 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 STYK1Q6J9G0 422 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-213ENST00000565173 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
CAPN3-213ENST00000565173 LTBP3Q9NS15 1303 aa11.41□□□□□ -0.58
CAPN3-213ENST00000565173 ST5P78524 1137 aa11.41□□□□□ -0.58
CAPN3-213ENST00000565173 PRPF40BQ6NWY9 871 aaKnown RBP11.41□□□□□ -0.58
CAPN3-213ENST00000565173 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
CAPN3-213ENST00000565173 MASTLQ96GX5 879 aa11.41□□□□□ -0.58
CAPN3-213ENST00000565173 WDR90Q96KV7 1748 aa11.4□□□□□ -0.58
CAPN3-213ENST00000565173 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-213ENST00000565173 SMC1BQ8NDV3 1235 aa11.4□□□□□ -0.58
CAPN3-213ENST00000565173 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.58
CAPN3-213ENST00000565173 TIAM2Q8IVF5 1701 aa11.4□□□□□ -0.58
CAPN3-213ENST00000565173 NPHP1O15259 732 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 EIF4A1P60842 406 aaKnown RBP11.39□□□□□ -0.59
CAPN3-213ENST00000565173 NFE2L2Q16236 605 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 JMYQ8N9B5 988 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 KLRG1Q96E93 195 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 THUMPD2Q9BTF0 503 aaKnown RBP11.39□□□□□ -0.59
CAPN3-213ENST00000565173 TAOK3Q9H2K8 898 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
CAPN3-213ENST00000565173 DLG5Q8TDM6 1919 aa11.39□□□□□ -0.59
CAPN3-213ENST00000565173 NPR1P16066 1061 aa11.38□□□□□ -0.59
CAPN3-213ENST00000565173 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
CAPN3-213ENST00000565173 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
CAPN3-213ENST00000565173 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
CAPN3-213ENST00000565173 ARFGEF2Q9Y6D5 1785 aa11.38□□□□□ -0.59
CAPN3-213ENST00000565173 KDM3BQ7LBC6 1761 aa11.37□□□□□ -0.59
CAPN3-213ENST00000565173 ERVV-1B6SEH8 477 aa11.37□□□□□ -0.59
CAPN3-213ENST00000565173 SOGA3Q5TF21 947 aa11.37□□□□□ -0.59
CAPN3-213ENST00000565173 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-213ENST00000565173 NEFMP07197 916 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 OLFM4Q6UX06 510 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 TTLL7Q6ZT98 887 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 NGEFQ8N5V2 710 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 CACNA1SQ13698 1873 aa11.36□□□□□ -0.59
CAPN3-213ENST00000565173 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
CAPN3-213ENST00000565173 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
CAPN3-213ENST00000565173 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
CAPN3-213ENST00000565173 LRP10Q7Z4F1 713 aa11.35□□□□□ -0.59
CAPN3-213ENST00000565173 PNNQ9H307 717 aaKnown RBP11.35□□□□□ -0.59
CAPN3-213ENST00000565173 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
CAPN3-213ENST00000565173 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
CAPN3-213ENST00000565173 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
CAPN3-213ENST00000565173 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
CAPN3-213ENST00000565173 ALDH1B1P30837 517 aa11.34□□□□□ -0.59
CAPN3-213ENST00000565173 FKBP4Q02790 459 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN3-213ENST00000565173 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
CAPN3-213ENST00000565173 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
CAPN3-213ENST00000565173 NUP98P52948 1817 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 ABCC12Q96J65 1359 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 MYL6BP14649 208 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 PDIA6Q15084 440 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 RALBP1Q15311 655 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 ZNF277Q9NRM2 450 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-213ENST00000565173 MAPK8IP3Q9UPT6 1336 aa11.33□□□□□ -0.6
CAPN3-213ENST00000565173 GPTP24298 496 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-213ENST00000565173 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-213ENST00000565173 TMPOP42166 694 aaKnown RBP11.32□□□□□ -0.6
CAPN3-213ENST00000565173 RIPK4P57078 832 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 KIF6Q6ZMV9 814 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-213ENST00000565173 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 TSPYL4Q9UJ04 414 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
CAPN3-213ENST00000565173 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-213ENST00000565173 FZD9O00144 591 aa11.31□□□□□ -0.6
CAPN3-213ENST00000565173 PROSER3Q2NL68 480 aa11.31□□□□□ -0.6
CAPN3-213ENST00000565173 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
CAPN3-213ENST00000565173 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
CAPN3-213ENST00000565173 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
CAPN3-213ENST00000565173 RIC1Q4ADV7 1423 aa11.31□□□□□ -0.6
CAPN3-213ENST00000565173 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
CAPN3-213ENST00000565173 NTSR2O95665 410 aa11.3□□□□□ -0.6
CAPN3-213ENST00000565173 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
CAPN3-213ENST00000565173 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-213ENST00000565173 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
CAPN3-213ENST00000565173 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
CAPN3-213ENST00000565173 PSMD1Q99460 953 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms