RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
HERC2-206ENST00000564519 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
HERC2-206ENST00000564519 APAF1O14727 1248 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 MYL6BP14649 208 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 FSTL1Q12841 308 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
HERC2-206ENST00000564519 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
HERC2-206ENST00000564519 BCORQ6W2J9 1755 aa16.62■□□□□ 0.25
HERC2-206ENST00000564519 CHL1O00533 1208 aa16.62■□□□□ 0.25
HERC2-206ENST00000564519 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
HERC2-206ENST00000564519 RRAGCQ9HB90 399 aa16.62■□□□□ 0.25
HERC2-206ENST00000564519 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
HERC2-206ENST00000564519 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
HERC2-206ENST00000564519 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
HERC2-206ENST00000564519 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
HERC2-206ENST00000564519 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
HERC2-206ENST00000564519 ANXA1P04083 346 aa16.6■□□□□ 0.25
HERC2-206ENST00000564519 PDIA6Q15084 440 aa16.6■□□□□ 0.25
HERC2-206ENST00000564519 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
HERC2-206ENST00000564519 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
HERC2-206ENST00000564519 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
HERC2-206ENST00000564519 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
HERC2-206ENST00000564519 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
HERC2-206ENST00000564519 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
HERC2-206ENST00000564519 H0YIN7 160 aa16.59■□□□□ 0.25
HERC2-206ENST00000564519 TTLL6Q8N841 843 aa16.59■□□□□ 0.25
HERC2-206ENST00000564519 RGL2O15211 777 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 NPHP1O15259 732 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 LMNB1P20700 586 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 PDE6BP35913 854 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 ST5P78524 1137 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 NBPF5PQ86XG9 351 aaPredicted RBP16.58■□□□□ 0.24
HERC2-206ENST00000564519 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 ERBB4Q15303 1308 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 MAP3K15Q6ZN16 1313 aa16.58■□□□□ 0.24
HERC2-206ENST00000564519 ZC3H4Q9UPT8 1303 aaKnown RBP16.57■□□□□ 0.24
HERC2-206ENST00000564519 ERVV-1B6SEH8 477 aa16.57■□□□□ 0.24
HERC2-206ENST00000564519 ANP32CO43423 234 aa16.57■□□□□ 0.24
HERC2-206ENST00000564519 RASSF7Q02833 373 aa16.57■□□□□ 0.24
HERC2-206ENST00000564519 KIF6Q6ZMV9 814 aa16.57■□□□□ 0.24
HERC2-206ENST00000564519 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
HERC2-206ENST00000564519 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
HERC2-206ENST00000564519 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
HERC2-206ENST00000564519 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
HERC2-206ENST00000564519 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
HERC2-206ENST00000564519 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
HERC2-206ENST00000564519 GPTP24298 496 aa16.55■□□□□ 0.24
HERC2-206ENST00000564519 PRELPP51888 382 aa16.55■□□□□ 0.24
HERC2-206ENST00000564519 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
HERC2-206ENST00000564519 COL11A2P13942 1736 aaPredicted RBP16.54■□□□□ 0.24
HERC2-206ENST00000564519 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 SRGNP10124 158 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 HTRA3P83110 453 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 TPTE2Q6XPS3 522 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
HERC2-206ENST00000564519 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
HERC2-206ENST00000564519 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
HERC2-206ENST00000564519 VEGFAP15692 232 aaPredicted RBP16.53■□□□□ 0.24
HERC2-206ENST00000564519 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
HERC2-206ENST00000564519 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
HERC2-206ENST00000564519 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
HERC2-206ENST00000564519 C21orf2O43822 256 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
HERC2-206ENST00000564519 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
HERC2-206ENST00000564519 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 MASTLQ96GX5 879 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
HERC2-206ENST00000564519 NFKBIEO00221 500 aa16.51■□□□□ 0.23
HERC2-206ENST00000564519 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
HERC2-206ENST00000564519 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
HERC2-206ENST00000564519 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
HERC2-206ENST00000564519 HOXB7P09629 217 aa16.5■□□□□ 0.23
HERC2-206ENST00000564519 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
HERC2-206ENST00000564519 GNAI1P63096 354 aa16.5■□□□□ 0.23
HERC2-206ENST00000564519 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
HERC2-206ENST00000564519 CNKSR1Q969H4 720 aa16.5■□□□□ 0.23
HERC2-206ENST00000564519 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
HERC2-206ENST00000564519 NTSR2O95665 410 aa16.49■□□□□ 0.23
HERC2-206ENST00000564519 NYXQ9GZU5 481 aa16.49■□□□□ 0.23
HERC2-206ENST00000564519 NPR1P16066 1061 aa16.48■□□□□ 0.23
HERC2-206ENST00000564519 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
HERC2-206ENST00000564519 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
HERC2-206ENST00000564519 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
HERC2-206ENST00000564519 TNRC6CQ9HCJ0 1690 aaKnown RBP16.48■□□□□ 0.23
HERC2-206ENST00000564519 WDR90Q96KV7 1748 aa16.48■□□□□ 0.23
HERC2-206ENST00000564519 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms