RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 RRAGCQ9HB90 399 aa31.67■■■□□ 2.66
NME3-206ENST00000564252 ST5P78524 1137 aa31.66■■■□□ 2.66
NME3-206ENST00000564252 NPHP1O15259 732 aa31.65■■■□□ 2.66
NME3-206ENST00000564252 NFE2L2Q16236 605 aa31.65■■■□□ 2.66
NME3-206ENST00000564252 ZNF652Q9Y2D9 606 aa31.65■■■□□ 2.66
NME3-206ENST00000564252 FER1L6Q2WGJ9 1857 aa31.65■■■□□ 2.66
NME3-206ENST00000564252 RGL2O15211 777 aa31.63■■■□□ 2.65
NME3-206ENST00000564252 C21orf2O43822 256 aa31.63■■■□□ 2.65
NME3-206ENST00000564252 SRGNP10124 158 aa31.63■■■□□ 2.65
NME3-206ENST00000564252 ZNF219Q9P2Y4 722 aaPredicted RBP31.63■■■□□ 2.65
NME3-206ENST00000564252 STYK1Q6J9G0 422 aa31.62■■■□□ 2.65
NME3-206ENST00000564252 NBPF5PQ86XG9 351 aaPredicted RBP31.62■■■□□ 2.65
NME3-206ENST00000564252 PNISRQ8TF01 805 aaKnown RBP31.62■■■□□ 2.65
NME3-206ENST00000564252 ARFGEF2Q9Y6D5 1785 aa31.62■■■□□ 2.65
NME3-206ENST00000564252 CACNA1SQ13698 1873 aa31.61■■■□□ 2.65
NME3-206ENST00000564252 SLX4Q8IY92 1834 aa31.61■■■□□ 2.65
NME3-206ENST00000564252 GLTPD2A6NH11 291 aa31.61■■■□□ 2.65
NME3-206ENST00000564252 CNKSR1Q969H4 720 aa31.61■■■□□ 2.65
NME3-206ENST00000564252 FSTL1Q12841 308 aa31.6■■■□□ 2.65
NME3-206ENST00000564252 THUMPD2Q9BTF0 503 aaKnown RBP31.6■■■□□ 2.65
NME3-206ENST00000564252 MASTLQ96GX5 879 aa31.59■■■□□ 2.65
NME3-206ENST00000564252 PNNQ9H307 717 aaKnown RBP31.59■■■□□ 2.65
NME3-206ENST00000564252 NIP7Q9Y221 180 aaKnown RBP eCLIP31.59■■■□□ 2.65
NME3-206ENST00000564252 WDR90Q96KV7 1748 aa31.58■■■□□ 2.65
NME3-206ENST00000564252 MAPK8IP3Q9UPT6 1336 aa31.58■■■□□ 2.65
NME3-206ENST00000564252 DICER1Q9UPY3 1922 aaKnown RBP31.58■■■□□ 2.65
NME3-206ENST00000564252 EIF4A1P60842 406 aaKnown RBP31.58■■■□□ 2.65
NME3-206ENST00000564252 PRPF40BQ6NWY9 871 aaKnown RBP31.58■■■□□ 2.65
NME3-206ENST00000564252 LTBP3Q9NS15 1303 aa31.57■■■□□ 2.64
NME3-206ENST00000564252 HLFQ16534 295 aa31.57■■■□□ 2.64
NME3-206ENST00000564252 DNAJC5GQ8N7S2 189 aa31.56■■■□□ 2.64
NME3-206ENST00000564252 KLRG2A4D1S0 409 aaPredicted RBP31.55■■■□□ 2.64
NME3-206ENST00000564252 TPTE2Q6XPS3 522 aa31.55■■■□□ 2.64
NME3-206ENST00000564252 RALBP1Q15311 655 aa31.54■■■□□ 2.64
NME3-206ENST00000564252 TAOK3Q9H2K8 898 aa31.53■■■□□ 2.64
NME3-206ENST00000564252 VEGFAP15692 232 aaPredicted RBP31.52■■■□□ 2.64
NME3-206ENST00000564252 NPR1P16066 1061 aa31.52■■■□□ 2.64
NME3-206ENST00000564252 SOGA3Q5TF21 947 aa31.52■■■□□ 2.64
NME3-206ENST00000564252 FAM177BA6PVY3 158 aa31.51■■■□□ 2.63
NME3-206ENST00000564252 ERFEQ4G0M1 354 aa31.51■■■□□ 2.63
NME3-206ENST00000564252 NGEFQ8N5V2 710 aa31.51■■■□□ 2.63
NME3-206ENST00000564252 SMC1BQ8NDV3 1235 aa31.51■■■□□ 2.63
NME3-206ENST00000564252 C7orf43Q8WVR3 580 aa31.51■■■□□ 2.63
NME3-206ENST00000564252 NUP98P52948 1817 aa31.5■■■□□ 2.63
NME3-206ENST00000564252 ERVV-1B6SEH8 477 aa31.5■■■□□ 2.63
NME3-206ENST00000564252 RRP7AQ9Y3A4 280 aaKnown RBP31.5■■■□□ 2.63
NME3-206ENST00000564252 MAP3K15Q6ZN16 1313 aa31.49■■■□□ 2.63
NME3-206ENST00000564252 POTECB2RU33 542 aa31.48■■■□□ 2.63
NME3-206ENST00000564252 HTRA3P83110 453 aa31.48■■■□□ 2.63
NME3-206ENST00000564252 DPY19L2Q6NUT2 758 aa31.48■■■□□ 2.63
NME3-206ENST00000564252 TTLL7Q6ZT98 887 aa31.48■■■□□ 2.63
NME3-206ENST00000564252 MYL6BP14649 208 aa31.46■■■□□ 2.63
NME3-206ENST00000564252 RIPK4P57078 832 aa31.46■■■□□ 2.63
NME3-206ENST00000564252 TSPYL4Q9UJ04 414 aa31.46■■■□□ 2.63
NME3-206ENST00000564252 CCDC93Q567U6 631 aa31.45■■■□□ 2.63
NME3-206ENST00000564252 KIF6Q6ZMV9 814 aa31.45■■■□□ 2.63
NME3-206ENST00000564252 DDX10Q13206 875 aaKnown RBP31.44■■■□□ 2.62
NME3-206ENST00000564252 ERBB4Q15303 1308 aa31.44■■■□□ 2.62
NME3-206ENST00000564252 ABCC12Q96J65 1359 aa31.43■■■□□ 2.62
NME3-206ENST00000564252 GTF2E1P29083 439 aaPredicted RBP31.43■■■□□ 2.62
NME3-206ENST00000564252 TMPOP42166 694 aaKnown RBP31.43■■■□□ 2.62
NME3-206ENST00000564252 NYXQ9GZU5 481 aa31.43■■■□□ 2.62
NME3-206ENST00000564252 ZBTB3Q9H5J0 574 aa31.42■■■□□ 2.62
NME3-206ENST00000564252 MYBBP1AQ9BQG0 1328 aaKnown RBP31.42■■■□□ 2.62
NME3-206ENST00000564252 NUTM1Q86Y26 1132 aa31.41■■■□□ 2.62
NME3-206ENST00000564252 UBN2Q6ZU65 1347 aa31.41■■■□□ 2.62
NME3-206ENST00000564252 IBTKQ9P2D0 1353 aaPredicted RBP31.41■■■□□ 2.62
NME3-206ENST00000564252 CRY2Q49AN0 593 aa31.4■■■□□ 2.62
NME3-206ENST00000564252 OLFM4Q6UX06 510 aa31.4■■■□□ 2.62
NME3-206ENST00000564252 KLRG1Q96E93 195 aa31.4■■■□□ 2.62
NME3-206ENST00000564252 BABAM1Q9NWV8 329 aa31.4■■■□□ 2.62
NME3-206ENST00000564252 GPTP24298 496 aa31.39■■■□□ 2.62
NME3-206ENST00000564252 ALDH1B1P30837 517 aa31.39■■■□□ 2.62
NME3-206ENST00000564252 FKBP4Q02790 459 aaKnown RBP eCLIP31.39■■■□□ 2.62
NME3-206ENST00000564252 LRP10Q7Z4F1 713 aa31.39■■■□□ 2.62
NME3-206ENST00000564252 DDNO94850 711 aaPredicted RBP31.38■■■□□ 2.61
NME3-206ENST00000564252 LMOD3Q0VAK6 560 aa31.38■■■□□ 2.61
NME3-206ENST00000564252 IFFO2Q5TF58 517 aa31.38■■■□□ 2.61
NME3-206ENST00000564252 RIC1Q4ADV7 1423 aa31.38■■■□□ 2.61
NME3-206ENST00000564252 PDIA6Q15084 440 aa31.37■■■□□ 2.61
NME3-206ENST00000564252 ZNF34Q8IZ26 560 aa31.37■■■□□ 2.61
NME3-206ENST00000564252 SUSD4Q5VX71 490 aa31.36■■■□□ 2.61
NME3-206ENST00000564252 GIGYF2Q6Y7W6 1299 aaKnown RBP31.36■■■□□ 2.61
NME3-206ENST00000564252 SNED1Q8TER0 1413 aa31.35■■■□□ 2.61
NME3-206ENST00000564252 EIF2S2P20042 333 aaKnown RBP31.35■■■□□ 2.61
NME3-206ENST00000564252 CCDC146Q8IYE0 955 aa31.35■■■□□ 2.61
NME3-206ENST00000564252 RTKN2Q8IZC4 609 aa31.35■■■□□ 2.61
NME3-206ENST00000564252 ZNF277Q9NRM2 450 aaPredicted RBP31.35■■■□□ 2.61
NME3-206ENST00000564252 PCNTO95613 3336 aa31.34■■■□□ 2.61
NME3-206ENST00000564252 NTSR2O95665 410 aa31.33■■■□□ 2.61
NME3-206ENST00000564252 JMYQ8N9B5 988 aa31.33■■■□□ 2.61
NME3-206ENST00000564252 PROSER3Q2NL68 480 aa31.32■■■□□ 2.6
NME3-206ENST00000564252 ANXA1P04083 346 aa31.31■■■□□ 2.6
NME3-206ENST00000564252 HOXA10P31260 410 aaPredicted RBP31.31■■■□□ 2.6
NME3-206ENST00000564252 NEUROD2Q15784 382 aa31.31■■■□□ 2.6
NME3-206ENST00000564252 L3MBTL3Q96JM7 780 aaPredicted RBP31.3■■■□□ 2.6
NME3-206ENST00000564252 POTEIP0CG38 1075 aa31.29■■■□□ 2.6
NME3-206ENST00000564252 POTEJP0CG39 1038 aa31.29■■■□□ 2.6
NME3-206ENST00000564252 PARP10Q53GL7 1025 aa31.29■■■□□ 2.6
NME3-206ENST00000564252 SYNE4Q8N205 404 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms