RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
CLN6-203ENST00000563917 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
CLN6-203ENST00000563917 GLTPD2A6NH11 291 aa12.59□□□□□ -0.39
CLN6-203ENST00000563917 RGL2O15211 777 aa12.59□□□□□ -0.39
CLN6-203ENST00000563917 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
CLN6-203ENST00000563917 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
CLN6-203ENST00000563917 MIS18AQ9NYP9 233 aa12.59□□□□□ -0.39
CLN6-203ENST00000563917 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLN6-203ENST00000563917 SBF1O95248 1867 aa12.58□□□□□ -0.4
CLN6-203ENST00000563917 ERFEQ4G0M1 354 aa12.58□□□□□ -0.4
CLN6-203ENST00000563917 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
CLN6-203ENST00000563917 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
CLN6-203ENST00000563917 TAOK3Q9H2K8 898 aa12.58□□□□□ -0.4
CLN6-203ENST00000563917 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
CLN6-203ENST00000563917 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
CLN6-203ENST00000563917 SRGNP10124 158 aa12.57□□□□□ -0.4
CLN6-203ENST00000563917 NPR1P16066 1061 aa12.57□□□□□ -0.4
CLN6-203ENST00000563917 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
CLN6-203ENST00000563917 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
CLN6-203ENST00000563917 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
CLN6-203ENST00000563917 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
CLN6-203ENST00000563917 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
CLN6-203ENST00000563917 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
CLN6-203ENST00000563917 NFKBIEO00221 500 aa12.56□□□□□ -0.4
CLN6-203ENST00000563917 ALDH1B1P30837 517 aa12.56□□□□□ -0.4
CLN6-203ENST00000563917 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
CLN6-203ENST00000563917 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
CLN6-203ENST00000563917 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
CLN6-203ENST00000563917 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
CLN6-203ENST00000563917 RIPK4P57078 832 aa12.55□□□□□ -0.4
CLN6-203ENST00000563917 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
CLN6-203ENST00000563917 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
CLN6-203ENST00000563917 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
CLN6-203ENST00000563917 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
CLN6-203ENST00000563917 MYL6BP14649 208 aa12.54□□□□□ -0.4
CLN6-203ENST00000563917 EIF4A1P60842 406 aaKnown RBP12.54□□□□□ -0.4
CLN6-203ENST00000563917 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
CLN6-203ENST00000563917 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
CLN6-203ENST00000563917 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLN6-203ENST00000563917 HLFQ16534 295 aa12.53□□□□□ -0.4
CLN6-203ENST00000563917 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
CLN6-203ENST00000563917 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
CLN6-203ENST00000563917 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
CLN6-203ENST00000563917 ERBB4Q15303 1308 aa12.53□□□□□ -0.4
CLN6-203ENST00000563917 MAP3K15Q6ZN16 1313 aa12.53□□□□□ -0.4
CLN6-203ENST00000563917 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
CLN6-203ENST00000563917 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
CLN6-203ENST00000563917 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
CLN6-203ENST00000563917 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.41
CLN6-203ENST00000563917 PRELPP51888 382 aa12.52□□□□□ -0.41
CLN6-203ENST00000563917 BABAM1Q9NWV8 329 aa12.52□□□□□ -0.41
CLN6-203ENST00000563917 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
CLN6-203ENST00000563917 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
CLN6-203ENST00000563917 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
CLN6-203ENST00000563917 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
CLN6-203ENST00000563917 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
CLN6-203ENST00000563917 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
CLN6-203ENST00000563917 MYBBP1AQ9BQG0 1328 aaKnown RBP12.51□□□□□ -0.41
CLN6-203ENST00000563917 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
CLN6-203ENST00000563917 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
CLN6-203ENST00000563917 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
CLN6-203ENST00000563917 GPTP24298 496 aa12.5□□□□□ -0.41
CLN6-203ENST00000563917 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
CLN6-203ENST00000563917 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLN6-203ENST00000563917 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
CLN6-203ENST00000563917 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
CLN6-203ENST00000563917 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
CLN6-203ENST00000563917 SLX4Q8IY92 1834 aa12.5□□□□□ -0.41
CLN6-203ENST00000563917 WDR90Q96KV7 1748 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
CLN6-203ENST00000563917 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 DNAJC5GQ8N7S2 189 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
CLN6-203ENST00000563917 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
CLN6-203ENST00000563917 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
CLN6-203ENST00000563917 DDNO94850 711 aaPredicted RBP12.48□□□□□ -0.41
CLN6-203ENST00000563917 HSP90AB3PQ58FF7 597 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 C7orf43Q8WVR3 580 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 RBM17Q96I25 401 aaKnown RBP12.48□□□□□ -0.41
CLN6-203ENST00000563917 NLRP3Q96P20 1036 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
CLN6-203ENST00000563917 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
CLN6-203ENST00000563917 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
CLN6-203ENST00000563917 HTRA3P83110 453 aa12.47□□□□□ -0.41
CLN6-203ENST00000563917 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
CLN6-203ENST00000563917 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
CLN6-203ENST00000563917 SYNE4Q8N205 404 aa12.47□□□□□ -0.41
CLN6-203ENST00000563917 NUP98P52948 1817 aa12.46□□□□□ -0.41
CLN6-203ENST00000563917 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
CLN6-203ENST00000563917 CRY2Q49AN0 593 aa12.46□□□□□ -0.41
CLN6-203ENST00000563917 SUSD4Q5VX71 490 aa12.46□□□□□ -0.41
CLN6-203ENST00000563917 ZNF34Q8IZ26 560 aa12.46□□□□□ -0.41
CLN6-203ENST00000563917 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.41
CLN6-203ENST00000563917 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms