RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 PTPRCP08575 1304 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 KIF20BQ96Q89 1820 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 ZSCAN22P10073 491 aaPredicted RBP15.1■□□□□ 0.01
CCDC187-201ENST00000563590 ATF3P18847 181 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 ANAPC15P60006 121 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 NECAB1Q8N987 351 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 IL25Q9H293 177 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 TPM3P06753 285 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 CLIP2Q9UDT6 1046 aa15.1■□□□□ 0.01
CCDC187-201ENST00000563590 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
CCDC187-201ENST00000563590 CHL1O00533 1208 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 CASTP20810 708 aaKnown RBP15.09■□□□□ 0.01
CCDC187-201ENST00000563590 SYT1P21579 422 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 TEFQ10587 303 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 MAP3K11Q16584 847 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 TIGD1Q96MW7 591 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.09■□□□□ 0.01
CCDC187-201ENST00000563590 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
CCDC187-201ENST00000563590 ZC3H6P61129 1189 aaKnown RBP15.09■□□□□ 0.01
CCDC187-201ENST00000563590 NCBP1Q09161 790 aaKnown RBP15.09■□□□□ 0.01
CCDC187-201ENST00000563590 SPTLC3Q9NUV7 552 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 PIK3C2BO00750 1634 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 ANO6Q4KMQ2 910 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 KRT222Q8N1A0 295 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 TCEANC2Q96MN5 208 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 FMNL2Q96PY5 1086 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 FEZ1Q99689 392 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
CCDC187-201ENST00000563590 CEP135Q66GS9 1140 aa15.08■□□□□ 0.01
CCDC187-201ENST00000563590 MPRIPQ6WCQ1 1025 aa15.08■□□□□ 0.01
CCDC187-201ENST00000563590 HOMER1Q86YM7 354 aa15.08■□□□□ 0.01
CCDC187-201ENST00000563590 KCNF1Q9H3M0 494 aa15.08■□□□□ 0.01
CCDC187-201ENST00000563590 RPAP1Q9BWH6 1393 aaPredicted RBP15.08■□□□□ 0
CCDC187-201ENST00000563590 CCAR2Q8N163 923 aaKnown RBP15.08■□□□□ 0
CCDC187-201ENST00000563590 ST7Q9NRC1 585 aa15.08■□□□□ 0
CCDC187-201ENST00000563590 PNMA6EA0A0J9YXQ4 647 aa15.08■□□□□ 0
CCDC187-201ENST00000563590 AP5Z1O43299 807 aa15.08■□□□□ 0
CCDC187-201ENST00000563590 GNAI2P04899 355 aa15.08■□□□□ 0
CCDC187-201ENST00000563590 GJB2P29033 226 aa15.08■□□□□ 0
CCDC187-201ENST00000563590 GNL2Q13823 731 aaKnown RBP15.08■□□□□ 0
CCDC187-201ENST00000563590 HDGFL1Q5TGJ6 251 aa15.08■□□□□ 0
CCDC187-201ENST00000563590 SALL3Q9BXA9 1300 aa15.07■□□□□ 0
CCDC187-201ENST00000563590 PTPN14Q15678 1187 aa15.07■□□□□ 0
CCDC187-201ENST00000563590 LARP1BQ659C4 914 aaKnown RBP15.07■□□□□ 0
CCDC187-201ENST00000563590 C9orf78Q9NZ63 289 aaPredicted RBP15.07■□□□□ 0
CCDC187-201ENST00000563590 DLG5Q8TDM6 1919 aa15.07■□□□□ 0
CCDC187-201ENST00000563590 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
CCDC187-201ENST00000563590 CDK12Q9NYV4 1490 aaPredicted RBP15.07■□□□□ 0
CCDC187-201ENST00000563590 ELF2Q15723 593 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
CCDC187-201ENST00000563590 JAKMIP1Q96N16 626 aaKnown RBP15.06■□□□□ 0
CCDC187-201ENST00000563590 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
CCDC187-201ENST00000563590 PRR36Q9H6K5 1346 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 AGLP35573 1532 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 MYL6BP14649 208 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 DNAJC25Q9H1X3 360 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
CCDC187-201ENST00000563590 TMEM87AQ8NBN3 555 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 TMEM51Q9NW97 253 aa15.06■□□□□ 0
CCDC187-201ENST00000563590 TCHHQ07283 1943 aa15.05■□□□□ 0
CCDC187-201ENST00000563590 F13A1P00488 732 aa15.05■□□□□ 0
CCDC187-201ENST00000563590 AK2P54819 239 aa15.05■□□□□ 0
CCDC187-201ENST00000563590 DACT1Q9NYF0 836 aa15.05■□□□□ 0
CCDC187-201ENST00000563590 ALKQ9UM73 1620 aa15.05■□□□□ 0
CCDC187-201ENST00000563590 PREX1Q8TCU6 1659 aa15.05■□□□□ 0
CCDC187-201ENST00000563590 UBTFL1P0CB47 393 aaPredicted RBP15.05■□□□□ -0
CCDC187-201ENST00000563590 CCT4P50991 539 aaKnown RBP15.05■□□□□ -0
CCDC187-201ENST00000563590 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
CCDC187-201ENST00000563590 TMX1Q9H3N1 280 aa15.05■□□□□ -0
CCDC187-201ENST00000563590 KIAA0232Q92628 1395 aa15.05■□□□□ -0
CCDC187-201ENST00000563590 TYRO3Q06418 890 aa15.05■□□□□ -0
CCDC187-201ENST00000563590 SKIDA1Q1XH10 827 aa15.05■□□□□ -0
CCDC187-201ENST00000563590 LRRC59Q96AG4 307 aaKnown RBP15.05■□□□□ -0
CCDC187-201ENST00000563590 ZNF215Q9UL58 517 aaPredicted RBP15.05■□□□□ -0
CCDC187-201ENST00000563590 SMTNL1A8MU46 457 aa15.04■□□□□ -0
CCDC187-201ENST00000563590 ZNF165P49910 485 aa15.04■□□□□ -0
CCDC187-201ENST00000563590 ORAI2Q96SN7 254 aa15.04■□□□□ -0
CCDC187-201ENST00000563590 HTATSF1O43719 755 aaKnown RBP15.04■□□□□ -0
CCDC187-201ENST00000563590 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
CCDC187-201ENST00000563590 KRT85P78386 507 aa15.04■□□□□ -0
CCDC187-201ENST00000563590 FAM200AQ8TCP9 573 aa15.04■□□□□ -0
CCDC187-201ENST00000563590 KIF13AQ9H1H9 1805 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 ATP7BP35670 1465 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 SRGAP3O43295 1099 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 HSPA4P34932 840 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 SPATA32Q96LK8 384 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 NOL10Q9BSC4 688 aaKnown RBP15.03■□□□□ -0
CCDC187-201ENST00000563590 PHAXQ9H814 394 aaKnown RBP15.03■□□□□ -0
CCDC187-201ENST00000563590 A0A087WWV3 80 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 PRPF40BQ6NWY9 871 aaKnown RBP15.03■□□□□ -0
CCDC187-201ENST00000563590 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
CCDC187-201ENST00000563590 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
CCDC187-201ENST00000563590 FUCA2Q9BTY2 467 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 NLRP2Q9NX02 1062 aa15.03■□□□□ -0
CCDC187-201ENST00000563590 EDC4Q6P2E9 1401 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms