RNA–Protein interactions for RNA: ENST00000563412.1

TUBGCP4-205, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-205ENST00000563412 RIPK4P57078 832 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 MTHFSDQ2M296 383 aaKnown RBP8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 RC3H1Q5TC82 1133 aaKnown RBP8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 LDHDQ86WU2 507 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 MEGF6O75095 1541 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 PKD1L3Q7Z443 1732 aa8.42□□□□□ -1.06
TUBGCP4-205ENST00000563412 ADAMTS7Q9UKP4 1686 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 KDM6AO15550 1401 aaPredicted RBP8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 E9PSI1 815 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 NEFMP07197 916 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 GYS1P13807 737 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 ECE1P42892 770 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 PIGBQ92521 554 aa8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 ARHGEF1Q92888 912 aaKnown RBP8.41□□□□□ -1.06
TUBGCP4-205ENST00000563412 PCDH11XQ9BZA7 1347 aa8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 PCDH11YQ9BZA8 1340 aa8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 ZNF853P0CG23 659 aa8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 TATP17735 454 aaPredicted RBP8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 LMOD3Q0VAK6 560 aa8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 GAS2L2Q8NHY3 880 aa8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 MCOLN1Q9GZU1 580 aa8.4□□□□□ -1.06
TUBGCP4-205ENST00000563412 RNF123Q5XPI4 1314 aa8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 KIF13BQ9NQT8 1826 aa8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 MAP2K2P36507 400 aa8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 TTLL6Q8N841 843 aa8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
TUBGCP4-205ENST00000563412 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 C4BP0C0L5 1744 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 C5P01031 1676 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 CHRNA5P30532 468 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 NKX1-1Q15270 411 aaPredicted RBP8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 AMOTQ4VCS5 1084 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 PLEKHO1Q53GL0 409 aaPredicted RBP8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
TUBGCP4-205ENST00000563412 FANCIQ9NVI1 1328 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 SBF1O95248 1867 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 GNAT3A8MTJ3 354 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 RASSF7Q02833 373 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 ITPK1Q13572 414 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 DGKZQ13574 1117 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 PNMA8AQ86V59 439 aaPredicted RBP8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 IL17REQ8NFR9 667 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 ABT1Q9ULW3 272 aaKnown RBP8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 N4BP2Q86UW6 1770 aaPredicted RBP8.37□□□□□ -1.07
TUBGCP4-205ENST00000563412 SIPA1L3O60292 1781 aaPredicted RBP8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 SCN11AQ9UI33 1791 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 CHL1O00533 1208 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 AKAP4Q5JQC9 854 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 ZNF530Q6P9A1 599 aaPredicted RBP8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 MCM10Q7L590 875 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 SP7Q8TDD2 431 aaPredicted RBP8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 TMOD3Q9NYL9 352 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 CLEC11AQ9Y240 323 aa8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 TNRC18O15417 2968 aaPredicted RBP8.36□□□□□ -1.07
TUBGCP4-205ENST00000563412 UBR3Q6ZT12 1888 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 MRC1P22897 1456 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 H0YIN7 160 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 CYP27B1O15528 508 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 DDNO94850 711 aaPredicted RBP8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 POTEIP0CG38 1075 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 GNAI1P63096 354 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 CAPNS2Q96L46 248 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 TAF1DQ9H5J8 278 aaPredicted RBP8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 RCAN3Q9UKA8 241 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 ASAP1Q9ULH1 1129 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 PDZRN3Q9UPQ7 1066 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 TAF1LQ8IZX4 1826 aa8.35□□□□□ -1.07
TUBGCP4-205ENST00000563412 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 PHKG2P15735 406 aa8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 TM4SF1P30408 202 aa8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 LGR6Q9HBX8 967 aa8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 SUPT16HQ9Y5B9 1047 aaKnown RBP8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 KDM3BQ7LBC6 1761 aa8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
TUBGCP4-205ENST00000563412 NFKBIEO00221 500 aa8.33□□□□□ -1.08
TUBGCP4-205ENST00000563412 RNMTO43148 476 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms