RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 MAP3K15Q6ZN16 1313 aa15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 AFDNP55196 1824 aaKnown RBP15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 LRP10Q7Z4F1 713 aa15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 NBPF5PQ86XG9 351 aaPredicted RBP15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
NSMCE1-204ENST00000563273 KLRG2A4D1S0 409 aaPredicted RBP15.96■□□□□ 0.15
NSMCE1-204ENST00000563273 PDIA6Q15084 440 aa15.96■□□□□ 0.15
NSMCE1-204ENST00000563273 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
NSMCE1-204ENST00000563273 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
NSMCE1-204ENST00000563273 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
NSMCE1-204ENST00000563273 APAF1O14727 1248 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 NPHP1O15259 732 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 ANP32CO43423 234 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 HLFQ16534 295 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 STYK1Q6J9G0 422 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 ARFGEF1Q9Y6D6 1849 aa15.95■□□□□ 0.14
NSMCE1-204ENST00000563273 SRGNP10124 158 aa15.94■□□□□ 0.14
NSMCE1-204ENST00000563273 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
NSMCE1-204ENST00000563273 NYXQ9GZU5 481 aa15.94■□□□□ 0.14
NSMCE1-204ENST00000563273 GPBP1L1Q9HC44 474 aaPredicted RBP15.94■□□□□ 0.14
NSMCE1-204ENST00000563273 IFT57Q9NWB7 429 aa15.94■□□□□ 0.14
NSMCE1-204ENST00000563273 DLEC1Q9Y238 1755 aa15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 MYL6BP14649 208 aa15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 GIGYF2Q6Y7W6 1299 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 CNKSR1Q969H4 720 aa15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-204ENST00000563273 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-204ENST00000563273 C1QTNF8P60827 252 aa15.92■□□□□ 0.14
NSMCE1-204ENST00000563273 CCDC27Q2M243 656 aa15.92■□□□□ 0.14
NSMCE1-204ENST00000563273 C9orf131Q5VYM1 1079 aa15.92■□□□□ 0.14
NSMCE1-204ENST00000563273 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
NSMCE1-204ENST00000563273 GNAI1P63096 354 aa15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 CCDC184Q52MB2 194 aa15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 PARP10Q53GL7 1025 aa15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 SOGA3Q5TF21 947 aa15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 ZNF34Q8IZ26 560 aa15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 ZNF622Q969S3 477 aaKnown RBP eCLIP15.91■□□□□ 0.14
NSMCE1-204ENST00000563273 NPR1P16066 1061 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 LMNB1P20700 586 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 MBIPQ9NS73 344 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 LAS1LQ9Y4W2 734 aaKnown RBP15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 ANKRD31Q8N7Z5 1873 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 LTBP3Q9NS15 1303 aa15.9■□□□□ 0.14
NSMCE1-204ENST00000563273 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 ZBTB3Q9H5J0 574 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 MRS2Q9HD23 443 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 RNF181Q9P0P0 153 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 UBN2Q6ZU65 1347 aa15.89■□□□□ 0.13
NSMCE1-204ENST00000563273 NFKBIEO00221 500 aa15.88■□□□□ 0.13
NSMCE1-204ENST00000563273 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
NSMCE1-204ENST00000563273 CRY2Q49AN0 593 aa15.88■□□□□ 0.13
NSMCE1-204ENST00000563273 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
NSMCE1-204ENST00000563273 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
NSMCE1-204ENST00000563273 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
NSMCE1-204ENST00000563273 NTSR2O95665 410 aa15.87■□□□□ 0.13
NSMCE1-204ENST00000563273 COPS6Q7L5N1 327 aa15.87■□□□□ 0.13
NSMCE1-204ENST00000563273 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
NSMCE1-204ENST00000563273 XAGE3Q8WTP9 111 aa15.87■□□□□ 0.13
NSMCE1-204ENST00000563273 COL11A2P13942 1736 aaPredicted RBP15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 KIF3CO14782 793 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 C21orf2O43822 256 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 ALDH1B1P30837 517 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 RASSF7Q02833 373 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 SUSD4Q5VX71 490 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 C7orf43Q8WVR3 580 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 HYPKQ9NX55 129 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 CHPF2Q9P2E5 772 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 IL16Q14005 1332 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 ABCC12Q96J65 1359 aa15.86■□□□□ 0.13
NSMCE1-204ENST00000563273 ANXA1P04083 346 aa15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 GPTP24298 496 aa15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 PLBD2Q8NHP8 589 aa15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 ZNF526Q8TF50 670 aaPredicted RBP15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 NECTIN2Q92692 538 aa15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 KDM2BQ8NHM5 1336 aa15.85■□□□□ 0.13
NSMCE1-204ENST00000563273 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 PRELPP51888 382 aa15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 SLC10A5Q5PT55 438 aa15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 NUTM1Q86Y26 1132 aa15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 UTP14AQ9BVJ6 771 aaKnown RBP15.84■□□□□ 0.13
NSMCE1-204ENST00000563273 AIMP1Q12904 312 aaKnown RBP15.83■□□□□ 0.12
NSMCE1-204ENST00000563273 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
NSMCE1-204ENST00000563273 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms