RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MAP3K15Q6ZN16 1313 aa24.06■■□□□ 1.44
RAB40C-207ENST00000563109 ARFGEF2Q9Y6D5 1785 aa24.06■■□□□ 1.44
RAB40C-207ENST00000563109 RARSP54136 660 aaKnown RBP24.05■■□□□ 1.44
RAB40C-207ENST00000563109 CAMTA2O94983 1202 aa24.04■■□□□ 1.44
RAB40C-207ENST00000563109 FLIIQ13045 1269 aa24.04■■□□□ 1.44
RAB40C-207ENST00000563109 MRPL50Q8N5N7 158 aaKnown RBP24.04■■□□□ 1.44
RAB40C-207ENST00000563109 PDGFDQ9GZP0 370 aaPredicted RBP24.04■■□□□ 1.44
RAB40C-207ENST00000563109 ZBTB3Q9H5J0 574 aa24.04■■□□□ 1.44
RAB40C-207ENST00000563109 NUP98P52948 1817 aa24.04■■□□□ 1.44
RAB40C-207ENST00000563109 ERVV-1B6SEH8 477 aa24.03■■□□□ 1.44
RAB40C-207ENST00000563109 RGL2O15211 777 aa24.03■■□□□ 1.44
RAB40C-207ENST00000563109 ANKRD36CQ5JPF3 1778 aa24.03■■□□□ 1.44
RAB40C-207ENST00000563109 GYS1P13807 737 aa24.02■■□□□ 1.44
RAB40C-207ENST00000563109 FKBP5Q13451 457 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-207ENST00000563109 G2E3Q7L622 706 aa24.02■■□□□ 1.44
RAB40C-207ENST00000563109 PLBD2Q8NHP8 589 aa24.02■■□□□ 1.44
RAB40C-207ENST00000563109 MTFR1LQ9H019 292 aa24.02■■□□□ 1.44
RAB40C-207ENST00000563109 ANKRD13DQ6ZTN6 518 aa24.01■■□□□ 1.43
RAB40C-207ENST00000563109 RIC3Q7Z5B4 369 aa24.01■■□□□ 1.43
RAB40C-207ENST00000563109 NLGN1Q8N2Q7 840 aa24.01■■□□□ 1.43
RAB40C-207ENST00000563109 KIF16BQ96L93 1317 aa24.01■■□□□ 1.43
RAB40C-207ENST00000563109 ZBTB7AO95365 584 aa24■■□□□ 1.43
RAB40C-207ENST00000563109 MSL1Q68DK7 614 aa24■■□□□ 1.43
RAB40C-207ENST00000563109 CLEC4GQ6UXB4 293 aa24■■□□□ 1.43
RAB40C-207ENST00000563109 COL24A1Q17RW2 1714 aa23.99■■□□□ 1.43
RAB40C-207ENST00000563109 HSP90AB3PQ58FF7 597 aa23.99■■□□□ 1.43
RAB40C-207ENST00000563109 RCAN3Q9UKA8 241 aa23.99■■□□□ 1.43
RAB40C-207ENST00000563109 PTPRCP08575 1304 aa23.99■■□□□ 1.43
RAB40C-207ENST00000563109 BRPF1P55201 1214 aaPredicted RBP23.98■■□□□ 1.43
RAB40C-207ENST00000563109 FKBP8Q14318 412 aa23.98■■□□□ 1.43
RAB40C-207ENST00000563109 GIGYF2Q6Y7W6 1299 aaKnown RBP23.98■■□□□ 1.43
RAB40C-207ENST00000563109 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
RAB40C-207ENST00000563109 HLFQ16534 295 aa23.97■■□□□ 1.43
RAB40C-207ENST00000563109 KSR2Q6VAB6 950 aa23.97■■□□□ 1.43
RAB40C-207ENST00000563109 ATP10DQ9P241 1426 aa23.97■■□□□ 1.43
RAB40C-207ENST00000563109 ADCY9O60503 1353 aa23.96■■□□□ 1.43
RAB40C-207ENST00000563109 PI4KAP2A4QPH2 592 aa23.96■■□□□ 1.43
RAB40C-207ENST00000563109 BCAR3O75815 825 aa23.96■■□□□ 1.43
RAB40C-207ENST00000563109 PI4KAP1Q8N8J0 262 aa23.96■■□□□ 1.43
RAB40C-207ENST00000563109 MAP3K2Q9Y2U5 619 aa23.96■■□□□ 1.43
RAB40C-207ENST00000563109 POLD1P28340 1107 aa23.95■■□□□ 1.42
RAB40C-207ENST00000563109 ATF5Q9Y2D1 282 aaPredicted RBP23.95■■□□□ 1.42
RAB40C-207ENST00000563109 AFDNP55196 1824 aaKnown RBP23.95■■□□□ 1.42
RAB40C-207ENST00000563109 IPO8O15397 1037 aaKnown RBP23.94■■□□□ 1.42
RAB40C-207ENST00000563109 TBC1D9BQ66K14 1250 aa23.94■■□□□ 1.42
RAB40C-207ENST00000563109 BICDL1Q6ZP65 573 aa23.94■■□□□ 1.42
RAB40C-207ENST00000563109 SPON1Q9HCB6 807 aa23.94■■□□□ 1.42
RAB40C-207ENST00000563109 NOB1Q9ULX3 412 aaKnown RBP23.94■■□□□ 1.42
RAB40C-207ENST00000563109 NIP7Q9Y221 180 aaKnown RBP eCLIP23.94■■□□□ 1.42
RAB40C-207ENST00000563109 CARMIL3Q8ND23 1372 aa23.93■■□□□ 1.42
RAB40C-207ENST00000563109 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
RAB40C-207ENST00000563109 DNAAF4Q8WXU2 420 aa23.93■■□□□ 1.42
RAB40C-207ENST00000563109 FRAT1Q92837 279 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-207ENST00000563109 SETDB2Q96T68 719 aa23.93■■□□□ 1.42
RAB40C-207ENST00000563109 API5Q9BZZ5 524 aaKnown RBP23.93■■□□□ 1.42
RAB40C-207ENST00000563109 MMP10P09238 476 aa23.92■■□□□ 1.42
RAB40C-207ENST00000563109 TCIRG1Q13488 830 aa23.92■■□□□ 1.42
RAB40C-207ENST00000563109 NFIXQ14938 502 aa23.92■■□□□ 1.42
RAB40C-207ENST00000563109 METTL22Q9BUU2 404 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-207ENST00000563109 PARP3Q9Y6F1 533 aa23.92■■□□□ 1.42
RAB40C-207ENST00000563109 GPTP24298 496 aa23.91■■□□□ 1.42
RAB40C-207ENST00000563109 ARHGAP45Q92619 1136 aa23.91■■□□□ 1.42
RAB40C-207ENST00000563109 MYD88Q99836 296 aa23.91■■□□□ 1.42
RAB40C-207ENST00000563109 PXDNLA1KZ92 1463 aa23.91■■□□□ 1.42
RAB40C-207ENST00000563109 N4BP2Q86UW6 1770 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-207ENST00000563109 PARP10Q53GL7 1025 aa23.9■■□□□ 1.42
RAB40C-207ENST00000563109 F6X3S4 739 aa23.89■■□□□ 1.41
RAB40C-207ENST00000563109 TM4SF1P30408 202 aa23.89■■□□□ 1.41
RAB40C-207ENST00000563109 ZKSCAN2Q63HK3 967 aa23.89■■□□□ 1.41
RAB40C-207ENST00000563109 ZNF34Q8IZ26 560 aa23.89■■□□□ 1.41
RAB40C-207ENST00000563109 NPHP1O15259 732 aa23.88■■□□□ 1.41
RAB40C-207ENST00000563109 SLC4A10Q6U841 1118 aa23.88■■□□□ 1.41
RAB40C-207ENST00000563109 NRXN2Q9P2S2 1712 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 POLRMTO00411 1230 aaKnown RBP23.87■■□□□ 1.41
RAB40C-207ENST00000563109 DDR1Q08345 913 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 ATF7IPQ6VMQ6 1270 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 PPP1R42Q7Z4L9 355 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-207ENST00000563109 ISCA1Q9BUE6 129 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 LRP5O75197 1615 aa23.87■■□□□ 1.41
RAB40C-207ENST00000563109 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
RAB40C-207ENST00000563109 UBN2Q6ZU65 1347 aa23.86■■□□□ 1.41
RAB40C-207ENST00000563109 NBPF5PQ86XG9 351 aaPredicted RBP23.86■■□□□ 1.41
RAB40C-207ENST00000563109 LINS1Q8NG48 757 aa23.86■■□□□ 1.41
RAB40C-207ENST00000563109 NYXQ9GZU5 481 aa23.86■■□□□ 1.41
RAB40C-207ENST00000563109 SERPINB2P05120 415 aa23.85■■□□□ 1.41
RAB40C-207ENST00000563109 PTGER2P43116 358 aa23.85■■□□□ 1.41
RAB40C-207ENST00000563109 TRIM28Q13263 835 aaKnown RBP23.85■■□□□ 1.41
RAB40C-207ENST00000563109 NLRP10Q86W26 655 aa23.85■■□□□ 1.41
RAB40C-207ENST00000563109 CWC25Q9NXE8 425 aaPredicted RBP23.85■■□□□ 1.41
RAB40C-207ENST00000563109 FAM177BA6PVY3 158 aa23.84■■□□□ 1.41
RAB40C-207ENST00000563109 TRIM27P14373 513 aa23.84■■□□□ 1.41
RAB40C-207ENST00000563109 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
RAB40C-207ENST00000563109 CNBD1Q8NA66 436 aa23.84■■□□□ 1.41
RAB40C-207ENST00000563109 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
RAB40C-207ENST00000563109 SGIP1Q9BQI5 828 aa23.84■■□□□ 1.41
RAB40C-207ENST00000563109 GTF2E1P29083 439 aaPredicted RBP23.83■■□□□ 1.41
RAB40C-207ENST00000563109 TPTE2Q6XPS3 522 aa23.83■■□□□ 1.41
RAB40C-207ENST00000563109 UTP14AQ9BVJ6 771 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms