RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
AC040174.1-201ENST00000563003 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
AC040174.1-201ENST00000563003 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
AC040174.1-201ENST00000563003 TMEM87AQ8NBN3 555 aa16.41■□□□□ 0.22
AC040174.1-201ENST00000563003 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 NCBP1Q09161 790 aaKnown RBP16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 TSPYL4Q9UJ04 414 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 LRRC37A3O60309 1634 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 RGPD2P0DJD1 1756 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
AC040174.1-201ENST00000563003 SPC24Q8NBT2 197 aa16.39■□□□□ 0.22
AC040174.1-201ENST00000563003 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.22
AC040174.1-201ENST00000563003 TPM3P06753 285 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 FUCA2Q9BTY2 467 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 CTNNA3Q9UI47 895 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 MCCP23508 829 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 PDE1AP54750 535 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 KRT24Q2M2I5 525 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 ESYT1Q9BSJ8 1104 aa16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 UPF3BQ9BZI7 483 aaKnown RBP16.38■□□□□ 0.21
AC040174.1-201ENST00000563003 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 ZBTB22O15209 634 aa16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 ANAPC15P60006 121 aa16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 UBE2HP62256 183 aa16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 GABPB1Q06547 395 aaPredicted RBP16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
AC040174.1-201ENST00000563003 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
AC040174.1-201ENST00000563003 ANKRD24Q8TF21 1146 aa16.36■□□□□ 0.21
AC040174.1-201ENST00000563003 MED1Q15648 1581 aaPredicted RBP16.36■□□□□ 0.21
AC040174.1-201ENST00000563003 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
AC040174.1-201ENST00000563003 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
AC040174.1-201ENST00000563003 RGS12O14924 1447 aa16.36■□□□□ 0.21
AC040174.1-201ENST00000563003 SLFN14P0C7P3 912 aa16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 GOLGA6L6A8MZA4 724 aa16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 ILDR1Q86SU0 546 aaPredicted RBP16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 MEIS3Q99687 375 aa16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 TCHHQ07283 1943 aa16.35■□□□□ 0.21
AC040174.1-201ENST00000563003 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 SYCP1Q15431 976 aa16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 RGPD5Q99666 1765 aa16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 TNS3Q68CZ2 1445 aa16.34■□□□□ 0.21
AC040174.1-201ENST00000563003 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.21
AC040174.1-201ENST00000563003 PTGS1P23219 599 aa16.33■□□□□ 0.21
AC040174.1-201ENST00000563003 AMOTQ4VCS5 1084 aa16.33■□□□□ 0.21
AC040174.1-201ENST00000563003 PXDNQ92626 1479 aa16.33■□□□□ 0.21
AC040174.1-201ENST00000563003 ZSCAN22P10073 491 aaPredicted RBP16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 NAA30Q147X3 362 aaPredicted RBP16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 PTPRCP08575 1304 aa16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 FIBPO43427 364 aa16.33■□□□□ 0.2
AC040174.1-201ENST00000563003 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 C16orf45Q96MC5 204 aaPredicted RBP16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 SMTNL1A8MU46 457 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 CHMLP26374 656 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
AC040174.1-201ENST00000563003 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
AC040174.1-201ENST00000563003 ERBB3P21860 1342 aa16.31■□□□□ 0.2
AC040174.1-201ENST00000563003 CACNA1FO60840 1977 aa16.31■□□□□ 0.2
AC040174.1-201ENST00000563003 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
AC040174.1-201ENST00000563003 BRINP3Q76B58 766 aa16.31■□□□□ 0.2
AC040174.1-201ENST00000563003 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 STX6O43752 255 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 HMMRO75330 724 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 SYT1P21579 422 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 TERF2Q15554 542 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 KIF18AQ8NI77 898 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
AC040174.1-201ENST00000563003 TNNT1P13805 278 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 LRMPQ12912 555 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 COL18A1P39060 1754 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 F13A1P00488 732 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 KCNJ4P48050 445 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 CCDC186Q7Z3E2 898 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 SLAIN2Q9P270 581 aa16.29■□□□□ 0.2
AC040174.1-201ENST00000563003 ABCC6O95255 1503 aa16.28■□□□□ 0.2
AC040174.1-201ENST00000563003 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
AC040174.1-201ENST00000563003 TRIM6-TRIM34B2RNG4 842 aa16.28■□□□□ 0.2
AC040174.1-201ENST00000563003 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
AC040174.1-201ENST00000563003 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms